RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 FAM26DQ5JW98 314 aa9.46□□□□□ -0.9
CDH13-204ENST00000539548 METTL2BQ6P1Q9 378 aaKnown RBP9.46□□□□□ -0.9
CDH13-204ENST00000539548 SUSD1Q6UWL2 747 aa9.46□□□□□ -0.9
CDH13-204ENST00000539548 DET1Q7L5Y6 550 aa9.46□□□□□ -0.9
CDH13-204ENST00000539548 CYP4Z1Q86W10 505 aa9.46□□□□□ -0.9
CDH13-204ENST00000539548 PHACTR4Q8IZ21 702 aa9.46□□□□□ -0.9
CDH13-204ENST00000539548 RGL4Q8IZJ4 473 aa9.46□□□□□ -0.9
CDH13-204ENST00000539548 DYNC2LI1Q8TCX1 351 aa9.46□□□□□ -0.9
CDH13-204ENST00000539548 UBTD2Q8WUN7 234 aa9.46□□□□□ -0.9
CDH13-204ENST00000539548 ABHD8Q96I13 439 aa9.46□□□□□ -0.9
CDH13-204ENST00000539548 ZNF300Q96RE9 604 aaPredicted RBP9.46□□□□□ -0.9
CDH13-204ENST00000539548 SLC6A13Q9NSD5 602 aa9.46□□□□□ -0.9
CDH13-204ENST00000539548 FARSBQ9NSD9 589 aaKnown RBP9.46□□□□□ -0.9
CDH13-204ENST00000539548 SCN3BQ9NY72 215 aa9.46□□□□□ -0.9
CDH13-204ENST00000539548 OPTCQ9UBM4 332 aa9.46□□□□□ -0.9
CDH13-204ENST00000539548 ZNF490Q9ULM2 529 aaPredicted RBP9.46□□□□□ -0.9
CDH13-204ENST00000539548 FNDC3AQ9Y2H6 1198 aaKnown RBP9.46□□□□□ -0.9
CDH13-204ENST00000539548 PKP3Q9Y446 797 aa9.46□□□□□ -0.9
CDH13-204ENST00000539548 MICAL3Q7RTP6 2002 aa9.45□□□□□ -0.9
CDH13-204ENST00000539548 FRMPD3Q5JV73 1810 aa9.45□□□□□ -0.9
CDH13-204ENST00000539548 TMEM247A6NEH6 219 aa9.45□□□□□ -0.9
CDH13-204ENST00000539548 AREL1O15033 823 aa9.45□□□□□ -0.9
CDH13-204ENST00000539548 PER2O15055 1255 aa9.45□□□□□ -0.9
CDH13-204ENST00000539548 AQP9O43315 295 aa9.45□□□□□ -0.9
CDH13-204ENST00000539548 MITFO75030 526 aaPredicted RBP9.45□□□□□ -0.9
CDH13-204ENST00000539548 GUCA1CO95843 209 aa9.45□□□□□ -0.9
CDH13-204ENST00000539548 RHOCP08134 193 aa9.45□□□□□ -0.9
CDH13-204ENST00000539548 EBLN1P0CF75 366 aa9.45□□□□□ -0.9
CDH13-204ENST00000539548 BCKDHAP12694 445 aa9.45□□□□□ -0.9
CDH13-204ENST00000539548 HOXB9P17482 250 aaPredicted RBP9.45□□□□□ -0.9
CDH13-204ENST00000539548 DGKAP23743 735 aa9.45□□□□□ -0.9
CDH13-204ENST00000539548 IGFBP5P24593 272 aa9.45□□□□□ -0.9
CDH13-204ENST00000539548 PIK3CGP48736 1102 aa9.45□□□□□ -0.9
CDH13-204ENST00000539548 SLC11A2P49281 568 aa9.45□□□□□ -0.9
CDH13-204ENST00000539548 EIF2B2P49770 351 aaKnown RBP9.45□□□□□ -0.9
CDH13-204ENST00000539548 RPS24P62847 133 aaKnown RBP9.45□□□□□ -0.9
CDH13-204ENST00000539548 HMGCS1Q01581 520 aa9.45□□□□□ -0.9
CDH13-204ENST00000539548 ABHD18Q0P651 414 aa9.45□□□□□ -0.9
CDH13-204ENST00000539548 PTPRRQ15256 657 aa9.45□□□□□ -0.9
CDH13-204ENST00000539548 INAQ16352 499 aa9.45□□□□□ -0.9
CDH13-204ENST00000539548 HIST2H2ACQ16777 129 aaPredicted RBP9.45□□□□□ -0.9
CDH13-204ENST00000539548 PAGE2BQ5JRK9 111 aa9.45□□□□□ -0.9
CDH13-204ENST00000539548 CLLU1OSQ5K130 101 aa9.45□□□□□ -0.9
CDH13-204ENST00000539548 PERM1Q5SV97 790 aa9.45□□□□□ -0.9
CDH13-204ENST00000539548 AGAP7PQ5VUJ5 663 aa9.45□□□□□ -0.9
CDH13-204ENST00000539548 PTRHD1Q6GMV3 140 aaKnown RBP9.45□□□□□ -0.9
CDH13-204ENST00000539548 CAPN13Q6MZZ7 669 aaPredicted RBP9.45□□□□□ -0.9
CDH13-204ENST00000539548 CES5AQ6NT32 575 aa9.45□□□□□ -0.9
CDH13-204ENST00000539548 NCEH1Q6PIU2 408 aa9.45□□□□□ -0.9
CDH13-204ENST00000539548 B3GNT8Q7Z7M8 397 aa9.45□□□□□ -0.9
CDH13-204ENST00000539548 RTN4RL1Q86UN2 441 aaPredicted RBP9.45□□□□□ -0.9
CDH13-204ENST00000539548 CADM3Q8N126 398 aa9.45□□□□□ -0.9
CDH13-204ENST00000539548 USP7Q93009 1102 aa9.45□□□□□ -0.9
CDH13-204ENST00000539548 SLC35B4Q969S0 331 aa9.45□□□□□ -0.9
CDH13-204ENST00000539548 CIPCQ9C0C6 399 aa9.45□□□□□ -0.9
CDH13-204ENST00000539548 CLPBQ9H078 707 aa9.45□□□□□ -0.9
CDH13-204ENST00000539548 TNKS2Q9H2K2 1166 aa9.45□□□□□ -0.9
CDH13-204ENST00000539548 ZFP14Q9HCL3 533 aa9.45□□□□□ -0.9
CDH13-204ENST00000539548 SERHLQ9NQF3 203 aa9.45□□□□□ -0.9
CDH13-204ENST00000539548 VNN3Q9NY84 501 aa9.45□□□□□ -0.9
CDH13-204ENST00000539548 KLQ9UEF7 1012 aa9.45□□□□□ -0.9
CDH13-204ENST00000539548 DNMT3LQ9UJW3 386 aa9.45□□□□□ -0.9
CDH13-204ENST00000539548 PMF1-BGLAPU3KQ54 211 aa9.45□□□□□ -0.9
CDH13-204ENST00000539548 U3KQV3 271 aa9.45□□□□□ -0.9
CDH13-204ENST00000539548 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.44□□□□□ -0.9
CDH13-204ENST00000539548 ARVCFO00192 962 aa9.44□□□□□ -0.9
CDH13-204ENST00000539548 CBX4O00257 560 aa9.44□□□□□ -0.9
CDH13-204ENST00000539548 TOR1BO14657 336 aa9.44□□□□□ -0.9
CDH13-204ENST00000539548 NTRK1P04629 796 aa9.44□□□□□ -0.9
CDH13-204ENST00000539548 BMP4P12644 408 aa9.44□□□□□ -0.9
CDH13-204ENST00000539548 ZNF7P17097 686 aaPredicted RBP9.44□□□□□ -0.9
CDH13-204ENST00000539548 FSHRP23945 695 aa9.44□□□□□ -0.9
CDH13-204ENST00000539548 FMO3P31513 532 aa9.44□□□□□ -0.9
CDH13-204ENST00000539548 S100A3P33764 101 aa9.44□□□□□ -0.9
CDH13-204ENST00000539548 ATP5C1P36542 298 aaKnown RBP9.44□□□□□ -0.9
CDH13-204ENST00000539548 GDF5P43026 501 aa9.44□□□□□ -0.9
CDH13-204ENST00000539548 MAP2K4P45985 399 aa9.44□□□□□ -0.9
CDH13-204ENST00000539548 TMED10P49755 219 aaKnown RBP9.44□□□□□ -0.9
CDH13-204ENST00000539548 CLK3P49761 638 aaKnown RBP9.44□□□□□ -0.9
CDH13-204ENST00000539548 DAPP51397 102 aa9.44□□□□□ -0.9
CDH13-204ENST00000539548 HNRNPFP52597 415 aaKnown RBP9.44□□□□□ -0.9
CDH13-204ENST00000539548 CLDN8P56748 225 aa9.44□□□□□ -0.9
CDH13-204ENST00000539548 HTRA3P83110 453 aa9.44□□□□□ -0.9
CDH13-204ENST00000539548 ZNF177Q13360 481 aaPredicted RBP9.44□□□□□ -0.9
CDH13-204ENST00000539548 GBX1Q14549 363 aa9.44□□□□□ -0.9
CDH13-204ENST00000539548 CLCA4Q14CN2 919 aa9.44□□□□□ -0.9
CDH13-204ENST00000539548 CARD16Q5EG05 197 aa9.44□□□□□ -0.9
CDH13-204ENST00000539548 KDM4DQ6B0I6 523 aa9.44□□□□□ -0.9
CDH13-204ENST00000539548 DNAJC14Q6Y2X3 702 aaPredicted RBP9.44□□□□□ -0.9
CDH13-204ENST00000539548 CHST9Q7L1S5 443 aa9.44□□□□□ -0.9
CDH13-204ENST00000539548 PRSS48Q7RTY5 328 aa9.44□□□□□ -0.9
CDH13-204ENST00000539548 P2RY8Q86VZ1 359 aa9.44□□□□□ -0.9
CDH13-204ENST00000539548 ZDHHC21Q8IVQ6 265 aa9.44□□□□□ -0.9
CDH13-204ENST00000539548 C10orf111Q8N326 155 aa9.44□□□□□ -0.9
CDH13-204ENST00000539548 ELMOD1Q8N336 334 aa9.44□□□□□ -0.9
CDH13-204ENST00000539548 TMEM132CQ8N3T6 1108 aa9.44□□□□□ -0.9
CDH13-204ENST00000539548 SVOPQ8N4V2 548 aa9.44□□□□□ -0.9
CDH13-204ENST00000539548 NDNFQ8TB73 568 aa9.44□□□□□ -0.9
CDH13-204ENST00000539548 GLMNQ92990 594 aa9.44□□□□□ -0.9
CDH13-204ENST00000539548 ITCHQ96J02 903 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms