RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 KIFC1Q9BW19 673 aa18.41■□□□□ 0.54
TNFRSF1A-212ENST00000539372 TRIM55Q9BYV6 548 aa18.41■□□□□ 0.54
TNFRSF1A-212ENST00000539372 EPN3Q9H201 632 aa18.41■□□□□ 0.54
TNFRSF1A-212ENST00000539372 MKRN2OSH3BPM6 223 aa18.4■□□□□ 0.54
TNFRSF1A-212ENST00000539372 AP3B1O00203 1094 aa18.4■□□□□ 0.54
TNFRSF1A-212ENST00000539372 KDM1AO60341 852 aa18.4■□□□□ 0.54
TNFRSF1A-212ENST00000539372 AVILO75366 819 aa18.4■□□□□ 0.54
TNFRSF1A-212ENST00000539372 VAPBO95292 243 aa18.4■□□□□ 0.54
TNFRSF1A-212ENST00000539372 ARNTP27540 789 aa18.4■□□□□ 0.54
TNFRSF1A-212ENST00000539372 PKLRP30613 574 aa18.4■□□□□ 0.54
TNFRSF1A-212ENST00000539372 CSRP3P50461 194 aa18.4■□□□□ 0.54
TNFRSF1A-212ENST00000539372 EIF3BP55884 814 aaKnown RBP18.4■□□□□ 0.54
TNFRSF1A-212ENST00000539372 GPS1Q13098 491 aa18.4■□□□□ 0.54
TNFRSF1A-212ENST00000539372 TMED2Q15363 201 aa18.4■□□□□ 0.54
TNFRSF1A-212ENST00000539372 KYNUQ16719 465 aa18.4■□□□□ 0.54
TNFRSF1A-212ENST00000539372 CPZQ66K79 652 aa18.4■□□□□ 0.54
TNFRSF1A-212ENST00000539372 TTC27Q6P3X3 843 aa18.4■□□□□ 0.54
TNFRSF1A-212ENST00000539372 FAM198BQ6UWH4 519 aa18.4■□□□□ 0.54
TNFRSF1A-212ENST00000539372 TAX1BP1Q86VP1 789 aa18.4■□□□□ 0.54
TNFRSF1A-212ENST00000539372 GPR135Q8IZ08 494 aa18.4■□□□□ 0.54
TNFRSF1A-212ENST00000539372 SEC14L1Q92503 715 aa18.4■□□□□ 0.54
TNFRSF1A-212ENST00000539372 IL17FQ96PD4 163 aa18.4■□□□□ 0.54
TNFRSF1A-212ENST00000539372 SPRTNQ9H040 489 aaPredicted RBP18.4■□□□□ 0.54
TNFRSF1A-212ENST00000539372 P2RY12Q9H244 342 aa18.4■□□□□ 0.54
TNFRSF1A-212ENST00000539372 GNPTGQ9UJJ9 305 aa18.4■□□□□ 0.54
TNFRSF1A-212ENST00000539372 SNX7Q9UNH6 387 aa18.4■□□□□ 0.54
TNFRSF1A-212ENST00000539372 KLHL20Q9Y2M5 609 aa18.4■□□□□ 0.54
TNFRSF1A-212ENST00000539372 OR2B3O76000 313 aa18.39■□□□□ 0.53
TNFRSF1A-212ENST00000539372 SLCO2B1O94956 709 aa18.39■□□□□ 0.53
TNFRSF1A-212ENST00000539372 KRT14P02533 472 aa18.39■□□□□ 0.53
TNFRSF1A-212ENST00000539372 CTSBP07858 339 aa18.39■□□□□ 0.53
TNFRSF1A-212ENST00000539372 RAB40ALP0C0E4 278 aa18.39■□□□□ 0.53
TNFRSF1A-212ENST00000539372 RAB28P51157 221 aa18.39■□□□□ 0.53
TNFRSF1A-212ENST00000539372 CDK16Q00536 496 aa18.39■□□□□ 0.53
TNFRSF1A-212ENST00000539372 CHAF1BQ13112 559 aa18.39■□□□□ 0.53
TNFRSF1A-212ENST00000539372 KCNJ11Q14654 390 aa18.39■□□□□ 0.53
TNFRSF1A-212ENST00000539372 KIR2DS3Q14952 304 aa18.39■□□□□ 0.53
TNFRSF1A-212ENST00000539372 SLC5A12Q1EHB4 618 aa18.39■□□□□ 0.53
TNFRSF1A-212ENST00000539372 ANKRD22Q5VYY1 191 aa18.39■□□□□ 0.53
TNFRSF1A-212ENST00000539372 DCUN1D3Q8IWE4 304 aa18.39■□□□□ 0.53
TNFRSF1A-212ENST00000539372 MPP5Q8N3R9 675 aa18.39■□□□□ 0.53
TNFRSF1A-212ENST00000539372 LINC01555Q8NAE3 123 aa18.39■□□□□ 0.53
TNFRSF1A-212ENST00000539372 SKA2Q8WVK7 121 aaPredicted RBP18.39■□□□□ 0.53
TNFRSF1A-212ENST00000539372 THAP4Q8WY91 577 aa18.39■□□□□ 0.53
TNFRSF1A-212ENST00000539372 PANX3Q96QZ0 392 aa18.39■□□□□ 0.53
TNFRSF1A-212ENST00000539372 MENTQ9BUN1 341 aa18.39■□□□□ 0.53
TNFRSF1A-212ENST00000539372 NLNQ9BYT8 704 aa18.39■□□□□ 0.53
TNFRSF1A-212ENST00000539372 MRM3Q9HC36 420 aaKnown RBP18.39■□□□□ 0.53
TNFRSF1A-212ENST00000539372 IRAK4Q9NWZ3 460 aa18.39■□□□□ 0.53
TNFRSF1A-212ENST00000539372 TSR3Q9UJK0 312 aaKnown RBP18.39■□□□□ 0.53
TNFRSF1A-212ENST00000539372 SOX13Q9UN79 622 aa18.39■□□□□ 0.53
TNFRSF1A-212ENST00000539372 ARGFXA6NJG6 315 aa18.38■□□□□ 0.53
TNFRSF1A-212ENST00000539372 RPN2P04844 631 aa18.38■□□□□ 0.53
TNFRSF1A-212ENST00000539372 CAPN1P07384 714 aa18.38■□□□□ 0.53
TNFRSF1A-212ENST00000539372 RPS3P23396 243 aaKnown RBP eCLIP18.38■□□□□ 0.533e-7■■■□□ 18.4
TNFRSF1A-212ENST00000539372 FMO4P31512 558 aa18.38■□□□□ 0.53
TNFRSF1A-212ENST00000539372 GABRA4P48169 554 aa18.38■□□□□ 0.53
TNFRSF1A-212ENST00000539372 GRB7Q14451 532 aa18.38■□□□□ 0.53
TNFRSF1A-212ENST00000539372 CTSL3PQ5NE16 218 aa18.38■□□□□ 0.53
TNFRSF1A-212ENST00000539372 C1orf189Q5VU69 101 aa18.38■□□□□ 0.53
TNFRSF1A-212ENST00000539372 UNC5DQ6UXZ4 953 aa18.38■□□□□ 0.53
TNFRSF1A-212ENST00000539372 APLFQ8IW19 511 aaPredicted RBP18.38■□□□□ 0.53
TNFRSF1A-212ENST00000539372 GSDMBQ8TAX9 411 aa18.38■□□□□ 0.53
TNFRSF1A-212ENST00000539372 MAGOHBQ96A72 148 aaKnown RBP18.38■□□□□ 0.53
TNFRSF1A-212ENST00000539372 FAM136AQ96C01 138 aa18.38■□□□□ 0.53
TNFRSF1A-212ENST00000539372 TRIM56Q9BRZ2 755 aaKnown RBP18.38■□□□□ 0.53
TNFRSF1A-212ENST00000539372 ANAPC2Q9UJX6 822 aa18.38■□□□□ 0.53
TNFRSF1A-212ENST00000539372 TCFL5Q9UL49 500 aa18.38■□□□□ 0.53
TNFRSF1A-212ENST00000539372 RUVBL2Q9Y230 463 aaKnown RBP18.38■□□□□ 0.53
TNFRSF1A-212ENST00000539372 JRKLQ9Y4A0 524 aa18.38■□□□□ 0.53
TNFRSF1A-212ENST00000539372 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.37■□□□□ 0.53
TNFRSF1A-212ENST00000539372 KRT87PA6NCN2 255 aa18.37■□□□□ 0.53
TNFRSF1A-212ENST00000539372 H3BMH7 237 aa18.37■□□□□ 0.53
TNFRSF1A-212ENST00000539372 HBQ1P09105 142 aa18.37■□□□□ 0.53
TNFRSF1A-212ENST00000539372 CBSLP0DN79 551 aa18.37■□□□□ 0.53
TNFRSF1A-212ENST00000539372 AGXTP21549 392 aa18.37■□□□□ 0.53
TNFRSF1A-212ENST00000539372 CBSP35520 551 aa18.37■□□□□ 0.53
TNFRSF1A-212ENST00000539372 CASRP41180 1078 aa18.37■□□□□ 0.53
TNFRSF1A-212ENST00000539372 PTGIRP43119 386 aa18.37■□□□□ 0.53
TNFRSF1A-212ENST00000539372 BDKRB1P46663 353 aa18.37■□□□□ 0.53
TNFRSF1A-212ENST00000539372 SARNPP82979 210 aaKnown RBP18.37■□□□□ 0.53
TNFRSF1A-212ENST00000539372 NCF4Q15080 339 aa18.37■□□□□ 0.53
TNFRSF1A-212ENST00000539372 ZNF385CQ66K41 422 aaPredicted RBP18.37■□□□□ 0.53
TNFRSF1A-212ENST00000539372 MRNIPQ6NTE8 343 aa18.37■□□□□ 0.53
TNFRSF1A-212ENST00000539372 TCTN3Q6NUS6 607 aa18.37■□□□□ 0.53
TNFRSF1A-212ENST00000539372 CASC4Q6P4E1 433 aa18.37■□□□□ 0.53
TNFRSF1A-212ENST00000539372 ASB18Q6ZVZ8 466 aa18.37■□□□□ 0.53
TNFRSF1A-212ENST00000539372 OTOAQ7RTW8 1153 aa18.37■□□□□ 0.53
TNFRSF1A-212ENST00000539372 SDCCAG8Q86SQ7 713 aaPredicted RBP18.37■□□□□ 0.53
TNFRSF1A-212ENST00000539372 LRRC6Q86X45 466 aa18.37■□□□□ 0.53
TNFRSF1A-212ENST00000539372 RASGEF1CQ8N431 466 aa18.37■□□□□ 0.53
TNFRSF1A-212ENST00000539372 DNAJC22Q8N4W6 341 aa18.37■□□□□ 0.53
TNFRSF1A-212ENST00000539372 ZNF655Q8N720 491 aaPredicted RBP18.37■□□□□ 0.53
TNFRSF1A-212ENST00000539372 PBKQ96KB5 322 aa18.37■□□□□ 0.53
TNFRSF1A-212ENST00000539372 CHRNA10Q9GZZ6 450 aa18.37■□□□□ 0.53
TNFRSF1A-212ENST00000539372 IL1RAPL1Q9NZN1 696 aa18.37■□□□□ 0.53
TNFRSF1A-212ENST00000539372 SLC39A10Q9ULF5 831 aa18.37■□□□□ 0.53
TNFRSF1A-212ENST00000539372 NFS1Q9Y697 457 aa18.37■□□□□ 0.53
TNFRSF1A-212ENST00000539372 C9J4A7 227 aa18.36■□□□□ 0.53
TNFRSF1A-212ENST00000539372 GOLGA8MH3BSY2 632 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms