RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 AURKBQ96GD4 344 aaPredicted RBP24.3■■□□□ 1.48
RAB40C-204ENST00000538492 HIC2Q96JB3 615 aa24.3■■□□□ 1.48
RAB40C-204ENST00000538492 CPEB1Q9BZB8 566 aaKnown RBP24.3■■□□□ 1.48
RAB40C-204ENST00000538492 SLC29A3Q9BZD2 475 aa24.3■■□□□ 1.48
RAB40C-204ENST00000538492 ELOVL6Q9H5J4 265 aa24.3■■□□□ 1.48
RAB40C-204ENST00000538492 LIN28AQ9H9Z2 209 aaKnown RBP24.3■■□□□ 1.48
RAB40C-204ENST00000538492 CD320Q9NPF0 282 aa24.3■■□□□ 1.48
RAB40C-204ENST00000538492 LIMD1Q9UGP4 676 aa24.3■■□□□ 1.48
RAB40C-204ENST00000538492 ADGRE2Q9UHX3 823 aa24.3■■□□□ 1.48
RAB40C-204ENST00000538492 IGLV3-16A0A075B6K0 115 aa24.3■■□□□ 1.48
RAB40C-204ENST00000538492 UPK1AO00322 258 aa24.3■■□□□ 1.48
RAB40C-204ENST00000538492 BMP10O95393 424 aa24.3■■□□□ 1.48
RAB40C-204ENST00000538492 CXCL14O95715 111 aa24.3■■□□□ 1.48
RAB40C-204ENST00000538492 B3GALT4O96024 378 aa24.3■■□□□ 1.48
RAB40C-204ENST00000538492 HIST1H2AGP0C0S8 130 aaPredicted RBP24.3■■□□□ 1.48
RAB40C-204ENST00000538492 TCF3P15923 654 aa24.3■■□□□ 1.48
RAB40C-204ENST00000538492 HIST1H2ADP20671 130 aa24.3■■□□□ 1.48
RAB40C-204ENST00000538492 PHC1P78364 1004 aa24.3■■□□□ 1.48
RAB40C-204ENST00000538492 GCNT7Q6ZNI0 430 aa24.3■■□□□ 1.48
RAB40C-204ENST00000538492 RNF165Q6ZSG1 346 aa24.3■■□□□ 1.48
RAB40C-204ENST00000538492 LPCAT2Q7L5N7 544 aa24.3■■□□□ 1.48
RAB40C-204ENST00000538492 SLC22A15Q8IZD6 547 aa24.3■■□□□ 1.48
RAB40C-204ENST00000538492 HIST1H2AHQ96KK5 128 aa24.3■■□□□ 1.48
RAB40C-204ENST00000538492 HIST1H2AJQ99878 128 aa24.3■■□□□ 1.48
RAB40C-204ENST00000538492 H2AFJQ9BTM1 129 aa24.3■■□□□ 1.48
RAB40C-204ENST00000538492 BBS2Q9BXC9 721 aa24.3■■□□□ 1.48
RAB40C-204ENST00000538492 SLC12A9Q9BXP2 914 aa24.3■■□□□ 1.48
RAB40C-204ENST00000538492 UTS2RQ9UKP6 389 aa24.3■■□□□ 1.48
RAB40C-204ENST00000538492 INVSQ9Y283 1065 aa24.3■■□□□ 1.48
RAB40C-204ENST00000538492 A0A087WXM4 84 aa24.29■■□□□ 1.48
RAB40C-204ENST00000538492 DEAF1O75398 565 aaPredicted RBP24.29■■□□□ 1.48
RAB40C-204ENST00000538492 MTHFRP42898 656 aa24.29■■□□□ 1.48
RAB40C-204ENST00000538492 LILRA6Q6PI73 481 aa24.29■■□□□ 1.48
RAB40C-204ENST00000538492 ABRAXAS1Q6UWZ7 409 aa24.29■■□□□ 1.48
RAB40C-204ENST00000538492 ANKRD46Q86W74 232 aa24.29■■□□□ 1.48
RAB40C-204ENST00000538492 ASB11Q8WXH4 323 aa24.29■■□□□ 1.48
RAB40C-204ENST00000538492 TSSK3Q96PN8 268 aa24.29■■□□□ 1.48
RAB40C-204ENST00000538492 ATP1B2P14415 290 aaPredicted RBP24.29■■□□□ 1.48
RAB40C-204ENST00000538492 ITPKAP23677 461 aa24.29■■□□□ 1.48
RAB40C-204ENST00000538492 RPS14P62263 151 aaKnown RBP24.29■■□□□ 1.48
RAB40C-204ENST00000538492 NKG7Q16617 165 aa24.29■■□□□ 1.48
RAB40C-204ENST00000538492 NEK5Q6P3R8 708 aa24.29■■□□□ 1.48
RAB40C-204ENST00000538492 PATL1Q86TB9 770 aaKnown RBP24.29■■□□□ 1.48
RAB40C-204ENST00000538492 BEND7Q8N7W2 519 aaPredicted RBP24.29■■□□□ 1.48
RAB40C-204ENST00000538492 CCDC115Q96NT0 180 aa24.29■■□□□ 1.48
RAB40C-204ENST00000538492 P2RY13Q9BPV8 354 aa24.29■■□□□ 1.48
RAB40C-204ENST00000538492 SLC22A14Q9Y267 594 aa24.29■■□□□ 1.48
RAB40C-204ENST00000538492 PCDHB14Q9Y5E9 798 aa24.29■■□□□ 1.48
RAB40C-204ENST00000538492 GSNP06396 782 aa24.28■■□□□ 1.48
RAB40C-204ENST00000538492 TACR1P25103 407 aa24.28■■□□□ 1.48
RAB40C-204ENST00000538492 IST1P53990 364 aa24.28■■□□□ 1.48
RAB40C-204ENST00000538492 CCDC149Q6ZUS6 474 aa24.28■■□□□ 1.48
RAB40C-204ENST00000538492 OTOP2Q7RTS6 562 aa24.28■■□□□ 1.48
RAB40C-204ENST00000538492 ZNF641Q96N77 438 aaPredicted RBP24.28■■□□□ 1.48
RAB40C-204ENST00000538492 ATG10Q9H0Y0 220 aa24.28■■□□□ 1.48
RAB40C-204ENST00000538492 GORASP2Q9H8Y8 452 aa24.28■■□□□ 1.48
RAB40C-204ENST00000538492 ASIC5Q9NY37 505 aa24.28■■□□□ 1.48
RAB40C-204ENST00000538492 PCDHGA11Q9Y5H2 935 aa24.28■■□□□ 1.48
RAB40C-204ENST00000538492 ELOVL7A1L3X0 281 aa24.28■■□□□ 1.48
RAB40C-204ENST00000538492 ASLP04424 464 aa24.28■■□□□ 1.48
RAB40C-204ENST00000538492 CLTBP09497 229 aa24.28■■□□□ 1.48
RAB40C-204ENST00000538492 ARSFP54793 590 aa24.28■■□□□ 1.48
RAB40C-204ENST00000538492 RUNDC3AQ59EK9 446 aa24.28■■□□□ 1.48
RAB40C-204ENST00000538492 STK32CQ86UX6 486 aa24.28■■□□□ 1.48
RAB40C-204ENST00000538492 RNF175Q8N4F7 328 aa24.28■■□□□ 1.48
RAB40C-204ENST00000538492 HPS4Q9NQG7 708 aa24.28■■□□□ 1.48
RAB40C-204ENST00000538492 PABPN1LA6NDY0 278 aaKnown RBP24.27■■□□□ 1.48
RAB40C-204ENST00000538492 TRMUO75648 421 aaKnown RBP24.27■■□□□ 1.48
RAB40C-204ENST00000538492 LRATO95237 230 aa24.27■■□□□ 1.48
RAB40C-204ENST00000538492 C8GP07360 202 aa24.27■■□□□ 1.48
RAB40C-204ENST00000538492 PABPC1P11940 636 aaKnown RBP24.27■■□□□ 1.48
RAB40C-204ENST00000538492 YAP1P46937 504 aaKnown RBP24.27■■□□□ 1.48
RAB40C-204ENST00000538492 CREMQ03060 361 aa24.27■■□□□ 1.48
RAB40C-204ENST00000538492 ZNF648Q5T619 568 aaPredicted RBP24.27■■□□□ 1.48
RAB40C-204ENST00000538492 AP1ARQ63HQ0 302 aa24.27■■□□□ 1.48
RAB40C-204ENST00000538492 GDPD4Q6W3E5 623 aa24.27■■□□□ 1.48
RAB40C-204ENST00000538492 CLEC4FQ8N1N0 589 aa24.27■■□□□ 1.48
RAB40C-204ENST00000538492 C10orf111Q8N326 155 aa24.27■■□□□ 1.48
RAB40C-204ENST00000538492 AADATQ8N5Z0 425 aa24.27■■□□□ 1.48
RAB40C-204ENST00000538492 OR2A12Q8NGT7 310 aa24.27■■□□□ 1.48
RAB40C-204ENST00000538492 GFM2Q969S9 779 aaKnown RBP24.27■■□□□ 1.48
RAB40C-204ENST00000538492 FAM162AQ96A26 154 aa24.27■■□□□ 1.48
RAB40C-204ENST00000538492 LINC00597Q9H2U6 94 aa24.27■■□□□ 1.48
RAB40C-204ENST00000538492 KLHL42Q9P2K6 505 aa24.27■■□□□ 1.48
RAB40C-204ENST00000538492 ALBP02768 609 aa24.27■■□□□ 1.48
RAB40C-204ENST00000538492 LAPTM5Q13571 262 aa24.27■■□□□ 1.48
RAB40C-204ENST00000538492 LRRC70Q7Z2Q7 622 aa24.27■■□□□ 1.48
RAB40C-204ENST00000538492 SORCS1Q8WY21 1168 aa24.27■■□□□ 1.48
RAB40C-204ENST00000538492 NCLNQ969V3 563 aa24.27■■□□□ 1.48
RAB40C-204ENST00000538492 SNX6Q9UNH7 406 aa24.27■■□□□ 1.48
RAB40C-204ENST00000538492 CXCR6O00574 342 aa24.26■■□□□ 1.47
RAB40C-204ENST00000538492 NUAK1O60285 661 aa24.26■■□□□ 1.47
RAB40C-204ENST00000538492 CALRP27797 417 aaKnown RBP24.26■■□□□ 1.47
RAB40C-204ENST00000538492 ADARB1P78563 741 aaKnown RBP24.26■■□□□ 1.47
RAB40C-204ENST00000538492 PGS1Q32NB8 556 aa24.26■■□□□ 1.47
RAB40C-204ENST00000538492 APIPQ96GX9 242 aa24.26■■□□□ 1.47
RAB40C-204ENST00000538492 EGLN2Q96KS0 407 aa24.26■■□□□ 1.47
RAB40C-204ENST00000538492 INPP5KQ9BT40 448 aa24.26■■□□□ 1.47
RAB40C-204ENST00000538492 UGT2B28Q9BY64 529 aa24.26■■□□□ 1.47
RAB40C-204ENST00000538492 HELZP42694 1942 aaKnown RBP24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms