RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 PKDREJQ9NTG1 2253 aa13.48□□□□□ -0.25
SMARCA4-206ENST00000538456 SOCS6O14544 535 aa13.47□□□□□ -0.25
SMARCA4-206ENST00000538456 ITGAXP20702 1163 aa13.47□□□□□ -0.25
SMARCA4-206ENST00000538456 ACRV1P26436 265 aa13.47□□□□□ -0.25
SMARCA4-206ENST00000538456 RBL1P28749 1068 aa13.47□□□□□ -0.25
SMARCA4-206ENST00000538456 MC4RP32245 332 aa13.47□□□□□ -0.25
SMARCA4-206ENST00000538456 ADRA1AP35348 466 aa13.47□□□□□ -0.25
SMARCA4-206ENST00000538456 SLC1A1P43005 524 aa13.47□□□□□ -0.25
SMARCA4-206ENST00000538456 RPA4Q13156 261 aa13.47□□□□□ -0.25
SMARCA4-206ENST00000538456 TLR1Q15399 786 aa13.47□□□□□ -0.25
SMARCA4-206ENST00000538456 TFDP3Q5H9I0 405 aa13.47□□□□□ -0.25
SMARCA4-206ENST00000538456 B3GNTL1Q67FW5 361 aaPredicted RBP13.47□□□□□ -0.25
SMARCA4-206ENST00000538456 CAVIN1Q6NZI2 390 aaKnown RBP13.47□□□□□ -0.25
SMARCA4-206ENST00000538456 IGFL2Q6UWQ7 119 aa13.47□□□□□ -0.25
SMARCA4-206ENST00000538456 RANBP10Q6VN20 620 aa13.47□□□□□ -0.25
SMARCA4-206ENST00000538456 LINC00696Q6ZRV3 163 aa13.47□□□□□ -0.25
SMARCA4-206ENST00000538456 TAS2R42Q7RTR8 314 aa13.47□□□□□ -0.25
SMARCA4-206ENST00000538456 SERPINA9Q86WD7 417 aa13.47□□□□□ -0.25
SMARCA4-206ENST00000538456 CCDC50Q8IVM0 306 aa13.47□□□□□ -0.25
SMARCA4-206ENST00000538456 FLVCR1-AS1Q8TAF5 88 aa13.47□□□□□ -0.25
SMARCA4-206ENST00000538456 DNAJC1Q96KC8 554 aaKnown RBP13.47□□□□□ -0.25
SMARCA4-206ENST00000538456 MAGEB10Q96LZ2 347 aaPredicted RBP13.47□□□□□ -0.25
SMARCA4-206ENST00000538456 ANP32EQ9BTT0 268 aa13.47□□□□□ -0.25
SMARCA4-206ENST00000538456 OLAHQ9NV23 265 aa13.47□□□□□ -0.25
SMARCA4-206ENST00000538456 IFNKQ9P0W0 207 aa13.47□□□□□ -0.25
SMARCA4-206ENST00000538456 PLCL2Q9UPR0 1127 aa13.47□□□□□ -0.25
SMARCA4-206ENST00000538456 HS3ST3B1Q9Y662 390 aa13.47□□□□□ -0.25
SMARCA4-206ENST00000538456 CCDC168Q8NDH2 2452 aa13.47□□□□□ -0.25
SMARCA4-206ENST00000538456 DCHS2Q6V1P9 2916 aa13.46□□□□□ -0.25
SMARCA4-206ENST00000538456 IGLV3-16A0A075B6K0 115 aa13.46□□□□□ -0.25
SMARCA4-206ENST00000538456 hCG_1818297A0A087WSY0 165 aa13.46□□□□□ -0.25
SMARCA4-206ENST00000538456 A0A1B0GUH1 482 aa13.46□□□□□ -0.25
SMARCA4-206ENST00000538456 A0A1B0GX78 115 aa13.46□□□□□ -0.25
SMARCA4-206ENST00000538456 HACD1B0YJ81 288 aa13.46□□□□□ -0.25
SMARCA4-206ENST00000538456 ISM1B1AKI9 464 aa13.46□□□□□ -0.25
SMARCA4-206ENST00000538456 H7C0C1 242 aa13.46□□□□□ -0.25
SMARCA4-206ENST00000538456 STSP08842 583 aa13.46□□□□□ -0.25
SMARCA4-206ENST00000538456 TPBGLP0DKB5 382 aa13.46□□□□□ -0.25
SMARCA4-206ENST00000538456 PSMB4P28070 264 aa13.46□□□□□ -0.25
SMARCA4-206ENST00000538456 ATP5OP48047 213 aa13.46□□□□□ -0.25
SMARCA4-206ENST00000538456 KCNK10P57789 538 aa13.46□□□□□ -0.25
SMARCA4-206ENST00000538456 TUBB8Q3ZCM7 444 aa13.46□□□□□ -0.25
SMARCA4-206ENST00000538456 ITPRIPL1Q6GPH6 555 aa13.46□□□□□ -0.25
SMARCA4-206ENST00000538456 KIRREL2Q6UWL6 708 aa13.46□□□□□ -0.25
SMARCA4-206ENST00000538456 NAPRTQ6XQN6 538 aa13.46□□□□□ -0.25
SMARCA4-206ENST00000538456 DNAJC22Q8N4W6 341 aa13.46□□□□□ -0.25
SMARCA4-206ENST00000538456 METTL27Q8N6F8 245 aaPredicted RBP13.46□□□□□ -0.25
SMARCA4-206ENST00000538456 CATSPER1Q8NEC5 780 aa13.46□□□□□ -0.25
SMARCA4-206ENST00000538456 COG1Q8WTW3 980 aa13.46□□□□□ -0.25
SMARCA4-206ENST00000538456 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.46□□□□□ -0.25
SMARCA4-206ENST00000538456 FKBP10Q96AY3 582 aa13.46□□□□□ -0.25
SMARCA4-206ENST00000538456 THOC3Q96J01 351 aaKnown RBP13.46□□□□□ -0.25
SMARCA4-206ENST00000538456 SLX1AQ9BQ83 275 aa13.46□□□□□ -0.25
SMARCA4-206ENST00000538456 CHRNA10Q9GZZ6 450 aa13.46□□□□□ -0.25
SMARCA4-206ENST00000538456 LHPPQ9H008 270 aa13.46□□□□□ -0.25
SMARCA4-206ENST00000538456 GOLPH3Q9H4A6 298 aa13.46□□□□□ -0.25
SMARCA4-206ENST00000538456 SOX17Q9H6I2 414 aaPredicted RBP13.46□□□□□ -0.25
SMARCA4-206ENST00000538456 EURLQ9NYK6 297 aa13.46□□□□□ -0.25
SMARCA4-206ENST00000538456 CTSFQ9UBX1 484 aa13.46□□□□□ -0.25
SMARCA4-206ENST00000538456 AKAP9Q99996 3911 aa13.45□□□□□ -0.26
SMARCA4-206ENST00000538456 SETD2Q9BYW2 2564 aaPredicted RBP13.45□□□□□ -0.26
SMARCA4-206ENST00000538456 TACC2O95359 2948 aa13.45□□□□□ -0.26
SMARCA4-206ENST00000538456 MACROD2A1Z1Q3 448 aa13.45□□□□□ -0.26
SMARCA4-206ENST00000538456 PSTPIP1O43586 416 aa13.45□□□□□ -0.26
SMARCA4-206ENST00000538456 JRKO75564 520 aa13.45□□□□□ -0.26
SMARCA4-206ENST00000538456 SNRPB2P08579 225 aaKnown RBP13.45□□□□□ -0.26
SMARCA4-206ENST00000538456 MAGP20916 626 aa13.45□□□□□ -0.26
SMARCA4-206ENST00000538456 PEBP1P30086 187 aaKnown RBP13.45□□□□□ -0.26
SMARCA4-206ENST00000538456 MARCKSL1P49006 195 aa13.45□□□□□ -0.26
SMARCA4-206ENST00000538456 MSLNQ13421 630 aaPredicted RBP13.45□□□□□ -0.26
SMARCA4-206ENST00000538456 SPARCL1Q14515 664 aa13.45□□□□□ -0.26
SMARCA4-206ENST00000538456 RBBP7Q16576 425 aa13.45□□□□□ -0.26
SMARCA4-206ENST00000538456 NKG7Q16617 165 aa13.45□□□□□ -0.26
SMARCA4-206ENST00000538456 ZXDCQ2QGD7 858 aaPredicted RBP13.45□□□□□ -0.26
SMARCA4-206ENST00000538456 GPR33Q49SQ1 333 aa13.45□□□□□ -0.26
SMARCA4-206ENST00000538456 SYTL3Q4VX76 610 aa13.45□□□□□ -0.26
SMARCA4-206ENST00000538456 COX15Q7KZN9 410 aa13.45□□□□□ -0.26
SMARCA4-206ENST00000538456 OVCH1Q7RTY7 1134 aa13.45□□□□□ -0.26
SMARCA4-206ENST00000538456 BCORP1Q8N888 145 aa13.45□□□□□ -0.26
SMARCA4-206ENST00000538456 ELMO1Q92556 727 aa13.45□□□□□ -0.26
SMARCA4-206ENST00000538456 DLG3Q92796 817 aa13.45□□□□□ -0.26
SMARCA4-206ENST00000538456 NACC2Q96BF6 587 aa13.45□□□□□ -0.26
SMARCA4-206ENST00000538456 DNAJC7Q99615 494 aa13.45□□□□□ -0.26
SMARCA4-206ENST00000538456 SPSB2Q99619 263 aa13.45□□□□□ -0.26
SMARCA4-206ENST00000538456 MESP1Q9BRJ9 268 aa13.45□□□□□ -0.26
SMARCA4-206ENST00000538456 HEMGNQ9BXL5 484 aa13.45□□□□□ -0.26
SMARCA4-206ENST00000538456 RUBCNLQ9H714 662 aa13.45□□□□□ -0.26
SMARCA4-206ENST00000538456 WDR54Q9H977 334 aa13.45□□□□□ -0.26
SMARCA4-206ENST00000538456 SMARCAL1Q9NZC9 954 aa13.45□□□□□ -0.26
SMARCA4-206ENST00000538456 OR6C2Q9NZP2 312 aa13.45□□□□□ -0.26
SMARCA4-206ENST00000538456 AAR2Q9Y312 384 aaKnown RBP13.45□□□□□ -0.26
SMARCA4-206ENST00000538456 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.45□□□□□ -0.265e-9■■■□□ 17.2
SMARCA4-206ENST00000538456 TRBV5-4A0A0C4DH59 114 aa13.44□□□□□ -0.26
SMARCA4-206ENST00000538456 LIN7AO14910 233 aaPredicted RBP13.44□□□□□ -0.26
SMARCA4-206ENST00000538456 KRT38O76015 456 aa13.44□□□□□ -0.26
SMARCA4-206ENST00000538456 MCM3P25205 808 aa13.44□□□□□ -0.26
SMARCA4-206ENST00000538456 Q0VFX4 171 aa13.44□□□□□ -0.26
SMARCA4-206ENST00000538456 PRPSAP1Q14558 356 aa13.44□□□□□ -0.26
SMARCA4-206ENST00000538456 DBN1Q16643 649 aa13.44□□□□□ -0.26
SMARCA4-206ENST00000538456 SLC5A12Q1EHB4 618 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms