RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 IL6P05231 212 aa13.67□□□□□ -0.22
LIMK1-208ENST00000538333 PGRP06401 933 aa13.67□□□□□ -0.22
LIMK1-208ENST00000538333 BCKDHAP12694 445 aa13.67□□□□□ -0.22
LIMK1-208ENST00000538333 SYN1P17600 705 aa13.67□□□□□ -0.22
LIMK1-208ENST00000538333 SLC44A4Q53GD3 710 aa13.67□□□□□ -0.22
LIMK1-208ENST00000538333 NECAB2Q7Z6G3 386 aa13.67□□□□□ -0.22
LIMK1-208ENST00000538333 MSRB3Q8IXL7 192 aa13.67□□□□□ -0.22
LIMK1-208ENST00000538333 TRAM1L1Q8N609 369 aa13.67□□□□□ -0.22
LIMK1-208ENST00000538333 LEMD2Q8NC56 503 aa13.67□□□□□ -0.22
LIMK1-208ENST00000538333 SKA2Q8WVK7 121 aaPredicted RBP13.67□□□□□ -0.22
LIMK1-208ENST00000538333 MTFMTQ96DP5 389 aaKnown RBP13.67□□□□□ -0.22
LIMK1-208ENST00000538333 RAD9AQ99638 391 aa13.67□□□□□ -0.22
LIMK1-208ENST00000538333 FAM83CQ9BQN1 747 aa13.67□□□□□ -0.22
LIMK1-208ENST00000538333 C9orf16Q9BUW7 83 aa13.67□□□□□ -0.22
LIMK1-208ENST00000538333 MTG2Q9H4K7 406 aa13.67□□□□□ -0.22
LIMK1-208ENST00000538333 KRT87PA6NCN2 255 aa13.66□□□□□ -0.22
LIMK1-208ENST00000538333 NPIPB8E9PQR5 432 aa13.66□□□□□ -0.22
LIMK1-208ENST00000538333 SLCO2B1O94956 709 aa13.66□□□□□ -0.22
LIMK1-208ENST00000538333 HIST1H2AGP0C0S8 130 aaPredicted RBP13.66□□□□□ -0.22
LIMK1-208ENST00000538333 GGT1P19440 569 aa13.66□□□□□ -0.22
LIMK1-208ENST00000538333 HIST1H2ADP20671 130 aa13.66□□□□□ -0.22
LIMK1-208ENST00000538333 PRPH2P23942 346 aa13.66□□□□□ -0.22
LIMK1-208ENST00000538333 IRS1P35568 1242 aa13.66□□□□□ -0.22
LIMK1-208ENST00000538333 VASPP50552 380 aaPredicted RBP13.66□□□□□ -0.22
LIMK1-208ENST00000538333 AP1S2P56377 157 aa13.66□□□□□ -0.22
LIMK1-208ENST00000538333 PLIN5Q00G26 463 aa13.66□□□□□ -0.22
LIMK1-208ENST00000538333 CAMK1Q14012 370 aa13.66□□□□□ -0.22
LIMK1-208ENST00000538333 MAPKAPK3Q16644 382 aa13.66□□□□□ -0.22
LIMK1-208ENST00000538333 PYCR3Q53H96 274 aa13.66□□□□□ -0.22
LIMK1-208ENST00000538333 BPIFB1Q8TDL5 484 aa13.66□□□□□ -0.22
LIMK1-208ENST00000538333 PYCR2Q96C36 320 aa13.66□□□□□ -0.22
LIMK1-208ENST00000538333 HIST1H2AHQ96KK5 128 aa13.66□□□□□ -0.22
LIMK1-208ENST00000538333 NSMCE2Q96MF7 247 aa13.66□□□□□ -0.22
LIMK1-208ENST00000538333 CCDC115Q96NT0 180 aa13.66□□□□□ -0.22
LIMK1-208ENST00000538333 HIST1H2AJQ99878 128 aa13.66□□□□□ -0.22
LIMK1-208ENST00000538333 H2AFJQ9BTM1 129 aa13.66□□□□□ -0.22
LIMK1-208ENST00000538333 IKZF5Q9H5V7 419 aa13.66□□□□□ -0.22
LIMK1-208ENST00000538333 SLC24A3Q9HC58 644 aa13.66□□□□□ -0.22
LIMK1-208ENST00000538333 OLAHQ9NV23 265 aa13.66□□□□□ -0.22
LIMK1-208ENST00000538333 SLC25A37Q9NYZ2 338 aa13.66□□□□□ -0.22
LIMK1-208ENST00000538333 NDUFA13Q9P0J0 144 aa13.66□□□□□ -0.22
LIMK1-208ENST00000538333 DLGAP4Q9Y2H0 992 aa13.66□□□□□ -0.22
LIMK1-208ENST00000538333 NUP210Q8TEM1 1887 aaPredicted RBP13.66□□□□□ -0.22
LIMK1-208ENST00000538333 TRBV5-3A0A0A0MS03 114 aa13.66□□□□□ -0.22
LIMK1-208ENST00000538333 CFAP99D6REC4 459 aa13.66□□□□□ -0.22
LIMK1-208ENST00000538333 OR6B1O95007 311 aa13.66□□□□□ -0.22
LIMK1-208ENST00000538333 RASAL1O95294 804 aa13.66□□□□□ -0.22
LIMK1-208ENST00000538333 HNRNPA1P09651 372 aaKnown RBP eCLIP13.66□□□□□ -0.22
LIMK1-208ENST00000538333 CYP2A7P20853 494 aa13.66□□□□□ -0.22
LIMK1-208ENST00000538333 PHC1P78364 1004 aa13.66□□□□□ -0.22
LIMK1-208ENST00000538333 ZNF805Q5CZA5 627 aa13.66□□□□□ -0.22
LIMK1-208ENST00000538333 TMTC4Q5T4D3 741 aa13.66□□□□□ -0.22
LIMK1-208ENST00000538333 SPRED2Q7Z698 418 aa13.66□□□□□ -0.22
LIMK1-208ENST00000538333 GRASPQ7Z6J2 395 aaPredicted RBP13.66□□□□□ -0.22
LIMK1-208ENST00000538333 TECPR1Q7Z6L1 1165 aa13.66□□□□□ -0.22
LIMK1-208ENST00000538333 RIMKLAQ8IXN7 391 aa13.66□□□□□ -0.22
LIMK1-208ENST00000538333 GALNT15Q8N3T1 639 aa13.66□□□□□ -0.22
LIMK1-208ENST00000538333 BEND7Q8N7W2 519 aaPredicted RBP13.66□□□□□ -0.22
LIMK1-208ENST00000538333 SELENOMQ8WWX9 145 aa13.66□□□□□ -0.22
LIMK1-208ENST00000538333 ELMO1Q92556 727 aa13.66□□□□□ -0.22
LIMK1-208ENST00000538333 LRRC3BQ96PB8 259 aa13.66□□□□□ -0.22
LIMK1-208ENST00000538333 ZSCAN5AQ9BUG6 496 aa13.66□□□□□ -0.22
LIMK1-208ENST00000538333 RIOK2Q9BVS4 552 aaKnown RBP13.66□□□□□ -0.22
LIMK1-208ENST00000538333 C8orf4Q9NR00 106 aa13.66□□□□□ -0.22
LIMK1-208ENST00000538333 DKK3Q9UBP4 350 aa13.66□□□□□ -0.22
LIMK1-208ENST00000538333 IL36AQ9UHA7 158 aa13.66□□□□□ -0.22
LIMK1-208ENST00000538333 ZNF639Q9UID6 485 aa13.66□□□□□ -0.22
LIMK1-208ENST00000538333 SLC22A14Q9Y267 594 aa13.66□□□□□ -0.22
LIMK1-208ENST00000538333 LRRK1Q38SD2 2015 aa13.66□□□□□ -0.22
LIMK1-208ENST00000538333 TMEM202A6NGA9 273 aa13.65□□□□□ -0.22
LIMK1-208ENST00000538333 CISD3P0C7P0 127 aa13.65□□□□□ -0.22
LIMK1-208ENST00000538333 C7P10643 843 aa13.65□□□□□ -0.22
LIMK1-208ENST00000538333 CDH1P12830 882 aa13.65□□□□□ -0.22
LIMK1-208ENST00000538333 CEBPBP17676 345 aa13.65□□□□□ -0.22
LIMK1-208ENST00000538333 GSTT1P30711 240 aa13.65□□□□□ -0.22
LIMK1-208ENST00000538333 NNMTP40261 264 aa13.65□□□□□ -0.22
LIMK1-208ENST00000538333 PPIGQ13427 754 aaKnown RBP eCLIP13.65□□□□□ -0.227e-6■□□□□ 9.9
LIMK1-208ENST00000538333 CBX2Q14781 532 aaPredicted RBP13.65□□□□□ -0.22
LIMK1-208ENST00000538333 NADK2Q4G0N4 442 aa13.65□□□□□ -0.22
LIMK1-208ENST00000538333 ZNF648Q5T619 568 aaPredicted RBP13.65□□□□□ -0.22
LIMK1-208ENST00000538333 DPPA4Q7L190 304 aa13.65□□□□□ -0.22
LIMK1-208ENST00000538333 ZNF548Q8NEK5 533 aaPredicted RBP13.65□□□□□ -0.22
LIMK1-208ENST00000538333 CLHC1Q8NHS4 586 aa13.65□□□□□ -0.22
LIMK1-208ENST00000538333 MCOLN3Q8TDD5 553 aa13.65□□□□□ -0.22
LIMK1-208ENST00000538333 ASZ1Q8WWH4 475 aa13.65□□□□□ -0.22
LIMK1-208ENST00000538333 CHID1Q9BWS9 393 aa13.65□□□□□ -0.22
LIMK1-208ENST00000538333 PAPOLBQ9NRJ5 636 aaKnown RBP13.65□□□□□ -0.22
LIMK1-208ENST00000538333 PNPLA3Q9NST1 481 aa13.65□□□□□ -0.22
LIMK1-208ENST00000538333 DNAJC11Q9NVH1 559 aa13.65□□□□□ -0.22
LIMK1-208ENST00000538333 SNX6Q9UNH7 406 aa13.65□□□□□ -0.22
LIMK1-208ENST00000538333 SERTM1A2A2V5 107 aa13.65□□□□□ -0.22
LIMK1-208ENST00000538333 OR2AG2A6NM03 316 aa13.65□□□□□ -0.22
LIMK1-208ENST00000538333 H3BNH8 94 aa13.65□□□□□ -0.22
LIMK1-208ENST00000538333 XYLBO75191 536 aa13.65□□□□□ -0.22
LIMK1-208ENST00000538333 H6PDO95479 791 aa13.65□□□□□ -0.22
LIMK1-208ENST00000538333 FTH1P02794 183 aa13.65□□□□□ -0.22
LIMK1-208ENST00000538333 GSTM1P09488 218 aa13.65□□□□□ -0.22
LIMK1-208ENST00000538333 ATP6V1B1P15313 513 aa13.65□□□□□ -0.22
LIMK1-208ENST00000538333 WEE1P30291 646 aa13.65□□□□□ -0.22
LIMK1-208ENST00000538333 MMP12P39900 470 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms