RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 TRIM31Q9BZY9 425 aa8.13□□□□□ -1.11
SPARC-208ENST00000538026 SEMA4CQ9C0C4 833 aa8.13□□□□□ -1.11
SPARC-208ENST00000538026 TRIT1Q9H3H1 467 aaKnown RBP8.13□□□□□ -1.11
SPARC-208ENST00000538026 SYNPO2LQ9H987 977 aa8.13□□□□□ -1.11
SPARC-208ENST00000538026 SMYD2Q9NRG4 433 aa8.13□□□□□ -1.11
SPARC-208ENST00000538026 IARS2Q9NSE4 1012 aaKnown RBP8.13□□□□□ -1.11
SPARC-208ENST00000538026 C20orf96Q9NUD7 363 aaPredicted RBP8.13□□□□□ -1.11
SPARC-208ENST00000538026 AKAP7Q9P0M2 348 aaPredicted RBP8.13□□□□□ -1.11
SPARC-208ENST00000538026 RNF14Q9UBS8 474 aa8.13□□□□□ -1.11
SPARC-208ENST00000538026 GNPTGQ9UJJ9 305 aa8.13□□□□□ -1.11
SPARC-208ENST00000538026 ANAPC5Q9UJX4 755 aa8.13□□□□□ -1.11
SPARC-208ENST00000538026 FBXO5Q9UKT4 447 aa8.13□□□□□ -1.11
SPARC-208ENST00000538026 KLHL20Q9Y2M5 609 aa8.13□□□□□ -1.11
SPARC-208ENST00000538026 TDRKHQ9Y2W6 561 aaKnown RBP8.13□□□□□ -1.11
SPARC-208ENST00000538026 MYO18BQ8IUG5 2567 aa8.12□□□□□ -1.11
SPARC-208ENST00000538026 A0A1W2PPV9 198 aa8.12□□□□□ -1.11
SPARC-208ENST00000538026 GSAPA4D1B5 854 aa8.12□□□□□ -1.11
SPARC-208ENST00000538026 NRP2O60462 931 aa8.12□□□□□ -1.11
SPARC-208ENST00000538026 PIAS1O75925 651 aa8.12□□□□□ -1.11
SPARC-208ENST00000538026 C1QL1O75973 258 aa8.12□□□□□ -1.11
SPARC-208ENST00000538026 KIAA0754O94854 1291 aa8.12□□□□□ -1.11
SPARC-208ENST00000538026 ZBTB11O95625 1053 aaPredicted RBP8.12□□□□□ -1.11
SPARC-208ENST00000538026 PGAM1P18669 254 aa8.12□□□□□ -1.11
SPARC-208ENST00000538026 CASQ1P31415 396 aa8.12□□□□□ -1.11
SPARC-208ENST00000538026 BDKRB1P46663 353 aa8.12□□□□□ -1.11
SPARC-208ENST00000538026 CDKN2DP55273 166 aa8.12□□□□□ -1.11
SPARC-208ENST00000538026 TMPRSS3P57727 454 aa8.12□□□□□ -1.11
SPARC-208ENST00000538026 HSD11B2P80365 405 aa8.12□□□□□ -1.11
SPARC-208ENST00000538026 PLOD1Q02809 727 aaPredicted RBP8.12□□□□□ -1.11
SPARC-208ENST00000538026 CUL1Q13616 776 aa8.12□□□□□ -1.11
SPARC-208ENST00000538026 FASTKQ14296 549 aaKnown RBP8.12□□□□□ -1.11
SPARC-208ENST00000538026 KRT33BQ14525 404 aa8.12□□□□□ -1.11
SPARC-208ENST00000538026 IL11RAQ14626 422 aa8.12□□□□□ -1.11
SPARC-208ENST00000538026 ZXDCQ2QGD7 858 aaPredicted RBP8.12□□□□□ -1.11
SPARC-208ENST00000538026 LINC00303Q3SY05 128 aa8.12□□□□□ -1.11
SPARC-208ENST00000538026 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.12□□□□□ -1.11
SPARC-208ENST00000538026 SYTL3Q4VX76 610 aa8.12□□□□□ -1.11
SPARC-208ENST00000538026 PLEKHS1Q5SXH7 462 aa8.12□□□□□ -1.11
SPARC-208ENST00000538026 RBM20Q5T481 1227 aaKnown RBP8.12□□□□□ -1.11
SPARC-208ENST00000538026 TMEM164Q5U3C3 297 aa8.12□□□□□ -1.11
SPARC-208ENST00000538026 KLHL35Q6PF15 583 aa8.12□□□□□ -1.11
SPARC-208ENST00000538026 SPESP1Q6UW49 350 aa8.12□□□□□ -1.11
SPARC-208ENST00000538026 ZDHHC24Q6UX98 284 aa8.12□□□□□ -1.11
SPARC-208ENST00000538026 UNC5DQ6UXZ4 953 aa8.12□□□□□ -1.11
SPARC-208ENST00000538026 ZNF517Q6ZMY9 492 aaPredicted RBP8.12□□□□□ -1.11
SPARC-208ENST00000538026 GPR155Q7Z3F1 870 aa8.12□□□□□ -1.11
SPARC-208ENST00000538026 ANKMY2Q8IV38 441 aa8.12□□□□□ -1.11
SPARC-208ENST00000538026 CACNA2D3Q8IZS8 1091 aa8.12□□□□□ -1.11
SPARC-208ENST00000538026 SIDT2Q8NBJ9 832 aaKnown RBP8.12□□□□□ -1.11
SPARC-208ENST00000538026 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.12□□□□□ -1.11
SPARC-208ENST00000538026 GALNT6Q8NCL4 622 aa8.12□□□□□ -1.11
SPARC-208ENST00000538026 OR1L3Q8NH93 324 aa8.12□□□□□ -1.11
SPARC-208ENST00000538026 ERP44Q9BS26 406 aa8.12□□□□□ -1.11
SPARC-208ENST00000538026 MCMBPQ9BTE3 642 aa8.12□□□□□ -1.11
SPARC-208ENST00000538026 AARSD1Q9BTE6 412 aaKnown RBP8.12□□□□□ -1.11
SPARC-208ENST00000538026 ZMYND15Q9H091 742 aa8.12□□□□□ -1.11
SPARC-208ENST00000538026 C1GALT1Q9NS00 363 aa8.12□□□□□ -1.11
SPARC-208ENST00000538026 FGF21Q9NSA1 209 aa8.12□□□□□ -1.11
SPARC-208ENST00000538026 INTS10Q9NVR2 710 aaKnown RBP8.12□□□□□ -1.11
SPARC-208ENST00000538026 OR6C2Q9NZP2 312 aa8.12□□□□□ -1.11
SPARC-208ENST00000538026 SAMD15Q9P1V8 674 aa8.12□□□□□ -1.11
SPARC-208ENST00000538026 TSR3Q9UJK0 312 aaKnown RBP8.12□□□□□ -1.11
SPARC-208ENST00000538026 IKZF3Q9UKT9 509 aa8.12□□□□□ -1.11
SPARC-208ENST00000538026 CHMP2BQ9UQN3 213 aa8.12□□□□□ -1.11
SPARC-208ENST00000538026 DHRS7Q9Y394 339 aa8.12□□□□□ -1.11
SPARC-208ENST00000538026 PCDHGA4Q9Y5G9 962 aa8.12□□□□□ -1.11
SPARC-208ENST00000538026 PSAT1Q9Y617 370 aa8.12□□□□□ -1.11
SPARC-208ENST00000538026 MRPS18BQ9Y676 258 aaKnown RBP8.12□□□□□ -1.11
SPARC-208ENST00000538026 ARHGEF33A8MVX0 844 aa8.11□□□□□ -1.11
SPARC-208ENST00000538026 EFCAB8A8MWE9 144 aa8.11□□□□□ -1.11
SPARC-208ENST00000538026 GFYI3L273 518 aa8.11□□□□□ -1.11
SPARC-208ENST00000538026 NKX2-8O15522 239 aa8.11□□□□□ -1.11
SPARC-208ENST00000538026 PSIP1O75475 530 aaKnown RBP8.11□□□□□ -1.11
SPARC-208ENST00000538026 TSPAN12O95859 305 aa8.11□□□□□ -1.11
SPARC-208ENST00000538026 PRB1P04280 392 aa8.11□□□□□ -1.11
SPARC-208ENST00000538026 NTRK1P04629 796 aa8.11□□□□□ -1.11
SPARC-208ENST00000538026 APOA4P06727 396 aa8.11□□□□□ -1.11
SPARC-208ENST00000538026 CAPN1P07384 714 aa8.11□□□□□ -1.11
SPARC-208ENST00000538026 FURINP09958 794 aa8.11□□□□□ -1.11
SPARC-208ENST00000538026 MSL3P1P0C860 447 aa8.11□□□□□ -1.11
SPARC-208ENST00000538026 ERGP11308 486 aa8.11□□□□□ -1.11
SPARC-208ENST00000538026 CHRM3P20309 590 aa8.11□□□□□ -1.11
SPARC-208ENST00000538026 CD9P21926 228 aa8.11□□□□□ -1.11
SPARC-208ENST00000538026 RORAP35398 523 aa8.11□□□□□ -1.11
SPARC-208ENST00000538026 PPARGP37231 505 aaPredicted RBP8.11□□□□□ -1.11
SPARC-208ENST00000538026 STAT5AP42229 794 aa8.11□□□□□ -1.11
SPARC-208ENST00000538026 PAFAH1B1P43034 410 aa8.11□□□□□ -1.11
SPARC-208ENST00000538026 GCGRP47871 477 aa8.11□□□□□ -1.11
SPARC-208ENST00000538026 CARSP49589 748 aaKnown RBP8.11□□□□□ -1.11
SPARC-208ENST00000538026 RAB28P51157 221 aa8.11□□□□□ -1.11
SPARC-208ENST00000538026 TUBB4BP68371 445 aa8.11□□□□□ -1.11
SPARC-208ENST00000538026 GPS2Q13227 327 aa8.11□□□□□ -1.11
SPARC-208ENST00000538026 TUBB3Q13509 450 aa8.11□□□□□ -1.11
SPARC-208ENST00000538026 TUBB2AQ13885 445 aa8.11□□□□□ -1.11
SPARC-208ENST00000538026 KLHL38Q2WGJ6 581 aa8.11□□□□□ -1.11
SPARC-208ENST00000538026 SPANXN3Q5MJ09 141 aa8.11□□□□□ -1.11
SPARC-208ENST00000538026 MANEAQ5SRI9 462 aa8.11□□□□□ -1.11
SPARC-208ENST00000538026 UBAP2Q5T6F2 1119 aaKnown RBP8.11□□□□□ -1.11
SPARC-208ENST00000538026 RNF187Q5TA31 235 aaPredicted RBP8.11□□□□□ -1.11
SPARC-208ENST00000538026 ATP1A1-AS1Q5TC04 95 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms