RNA–Protein interactions for RNA: ENST00000537951.1

NPIPB4-208, Transcript of nuclear pore complex interacting protein family member B4, human

TSL 5 BASIC

Gene NPIPB4, Length 1,342 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB4-208	ENST00000537951	ADAM21	Q9UKJ8	722 aa		10.36	□□□□□ -0.75
NPIPB4-208	ENST00000537951	OARD1	Q9Y530	152 aa		10.36	□□□□□ -0.75
NPIPB4-208	ENST00000537951	ASB1	Q9Y576	335 aa		10.36	□□□□□ -0.75
NPIPB4-208	ENST00000537951	ANKRD12	Q6UB98	2062 aa		10.36	□□□□□ -0.75
NPIPB4-208	ENST00000537951	CEP295	Q9C0D2	2601 aa		10.36	□□□□□ -0.75
NPIPB4-208	ENST00000537951	FRY	Q5TBA9	3013 aa		10.35	□□□□□ -0.75
NPIPB4-208	ENST00000537951	IGHV1OR21-1	A0A087WYE8	117 aa		10.35	□□□□□ -0.75
NPIPB4-208	ENST00000537951	LILRA5	A6NI73	299 aa		10.35	□□□□□ -0.75
NPIPB4-208	ENST00000537951	TK2	O00142	265 aa		10.35	□□□□□ -0.75
NPIPB4-208	ENST00000537951	SLC30A4	O14863	429 aa		10.35	□□□□□ -0.75
NPIPB4-208	ENST00000537951	GIPC1	O14908	333 aa		10.35	□□□□□ -0.75
NPIPB4-208	ENST00000537951	RGS16	O15492	202 aa	Predicted RBP	10.35	□□□□□ -0.75
NPIPB4-208	ENST00000537951	KLK8	O60259	260 aa		10.35	□□□□□ -0.75
NPIPB4-208	ENST00000537951	KERA	O60938	352 aa		10.35	□□□□□ -0.75
NPIPB4-208	ENST00000537951	LDOC1	O95751	146 aa	Predicted RBP	10.35	□□□□□ -0.75
NPIPB4-208	ENST00000537951	SLC16A8	O95907	504 aa		10.35	□□□□□ -0.75
NPIPB4-208	ENST00000537951	VIP	P01282	170 aa		10.35	□□□□□ -0.75
NPIPB4-208	ENST00000537951	SLC2A4	P14672	509 aa		10.35	□□□□□ -0.75
NPIPB4-208	ENST00000537951	PNLIP	P16233	465 aa		10.35	□□□□□ -0.75
NPIPB4-208	ENST00000537951	CKMT2	P17540	419 aa		10.35	□□□□□ -0.75
NPIPB4-208	ENST00000537951	CD1C	P29017	333 aa		10.35	□□□□□ -0.75
NPIPB4-208	ENST00000537951	IMPA1	P29218	277 aa		10.35	□□□□□ -0.75
NPIPB4-208	ENST00000537951	PKLR	P30613	574 aa		10.35	□□□□□ -0.75
NPIPB4-208	ENST00000537951	CSF2RB	P32927	897 aa		10.35	□□□□□ -0.75
NPIPB4-208	ENST00000537951	PPP1CA	P62136	330 aa		10.35	□□□□□ -0.75
NPIPB4-208	ENST00000537951	SP140	Q13342	867 aa		10.35	□□□□□ -0.75
NPIPB4-208	ENST00000537951	TGFBI	Q15582	683 aa		10.35	□□□□□ -0.75
NPIPB4-208	ENST00000537951	CYP2A13	Q16696	494 aa		10.35	□□□□□ -0.75
NPIPB4-208	ENST00000537951	C18orf21	Q32NC0	220 aa	Predicted RBP	10.35	□□□□□ -0.75
NPIPB4-208	ENST00000537951	TAF1B	Q53T94	588 aa	Predicted RBP	10.35	□□□□□ -0.75
NPIPB4-208	ENST00000537951	NKAIN2	Q5VXU1	208 aa		10.35	□□□□□ -0.75
NPIPB4-208	ENST00000537951	EFL1	Q7Z2Z2	1120 aa	Known RBP	10.35	□□□□□ -0.75
NPIPB4-208	ENST00000537951	SPRED1	Q7Z699	444 aa		10.35	□□□□□ -0.75
NPIPB4-208	ENST00000537951	TBC1D1	Q86TI0	1168 aa	Predicted RBP	10.35	□□□□□ -0.75
NPIPB4-208	ENST00000537951	SRRM1	Q8IYB3	904 aa	Known RBP	10.35	□□□□□ -0.75
NPIPB4-208	ENST00000537951	ADGRF3	Q8IZF5	1079 aa		10.35	□□□□□ -0.75
NPIPB4-208	ENST00000537951	DEFB124	Q8NES8	71 aa		10.35	□□□□□ -0.75
NPIPB4-208	ENST00000537951	OR9A1P	Q8NGU1	263 aa		10.35	□□□□□ -0.75
NPIPB4-208	ENST00000537951	RHEBL1	Q8TAI7	183 aa		10.35	□□□□□ -0.75
NPIPB4-208	ENST00000537951	HMGCLL1	Q8TB92	370 aa		10.35	□□□□□ -0.75
NPIPB4-208	ENST00000537951	NETO1	Q8TDF5	533 aa		10.35	□□□□□ -0.75
NPIPB4-208	ENST00000537951	ZNF480	Q8WV37	535 aa		10.35	□□□□□ -0.75
NPIPB4-208	ENST00000537951	SKA2	Q8WVK7	121 aa	Predicted RBP	10.35	□□□□□ -0.75
NPIPB4-208	ENST00000537951	CXorf40B	Q96DE9	158 aa		10.35	□□□□□ -0.75
NPIPB4-208	ENST00000537951	CABS1	Q96KC9	395 aa		10.35	□□□□□ -0.75
NPIPB4-208	ENST00000537951	RDH14	Q9HBH5	336 aa		10.35	□□□□□ -0.75
NPIPB4-208	ENST00000537951	NMRAL1	Q9HBL8	299 aa		10.35	□□□□□ -0.75
NPIPB4-208	ENST00000537951	GEMIN8	Q9NWZ8	242 aa	Known RBP	10.35	□□□□□ -0.75
NPIPB4-208	ENST00000537951	SPHK1	Q9NYA1	384 aa		10.35	□□□□□ -0.75
NPIPB4-208	ENST00000537951	XPR1	Q9UBH6	696 aa		10.35	□□□□□ -0.75
NPIPB4-208	ENST00000537951	HEBP2	Q9Y5Z4	205 aa		10.35	□□□□□ -0.75
NPIPB4-208	ENST00000537951	CACNA1A	O00555	2505 aa		10.34	□□□□□ -0.75
NPIPB4-208	ENST00000537951	UNC13C	Q8NB66	2214 aa		10.34	□□□□□ -0.75
NPIPB4-208	ENST00000537951	CPED1	A4D0V7	1026 aa		10.34	□□□□□ -0.75
NPIPB4-208	ENST00000537951		E7ENX8	843 aa		10.34	□□□□□ -0.75
NPIPB4-208	ENST00000537951		G3V2L1	256 aa		10.34	□□□□□ -0.75
NPIPB4-208	ENST00000537951	UBXN8	O00124	270 aa		10.34	□□□□□ -0.75
NPIPB4-208	ENST00000537951	NTN3	O00634	580 aa	Predicted RBP	10.34	□□□□□ -0.75
NPIPB4-208	ENST00000537951	CAT	P04040	527 aa	Known RBP	10.34	□□□□□ -0.75
NPIPB4-208	ENST00000537951	PROC	P04070	461 aa		10.34	□□□□□ -0.75
NPIPB4-208	ENST00000537951	MYZAP	P0CAP1	466 aa		10.34	□□□□□ -0.75
NPIPB4-208	ENST00000537951	NDUFS1	P28331	727 aa		10.34	□□□□□ -0.75
NPIPB4-208	ENST00000537951	PLA2G5	P39877	138 aa		10.34	□□□□□ -0.75
NPIPB4-208	ENST00000537951	ETV4	P43268	484 aa		10.34	□□□□□ -0.75
NPIPB4-208	ENST00000537951	GPR3	P46089	330 aa		10.34	□□□□□ -0.75
NPIPB4-208	ENST00000537951	LSS	P48449	732 aa		10.34	□□□□□ -0.75
NPIPB4-208	ENST00000537951	RPIA	P49247	311 aa		10.34	□□□□□ -0.75
NPIPB4-208	ENST00000537951	RAB28	P51157	221 aa		10.34	□□□□□ -0.75
NPIPB4-208	ENST00000537951	YBX1	P67809	324 aa	Known RBP	10.34	□□□□□ -0.75
NPIPB4-208	ENST00000537951	CDKL1	Q00532	357 aa		10.34	□□□□□ -0.75
NPIPB4-208	ENST00000537951	TAP2	Q03519	686 aa		10.34	□□□□□ -0.75
NPIPB4-208	ENST00000537951	SQSTM1	Q13501	440 aa		10.34	□□□□□ -0.75
NPIPB4-208	ENST00000537951	FAM83E	Q2M2I3	478 aa		10.34	□□□□□ -0.75
NPIPB4-208	ENST00000537951	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	10.34	□□□□□ -0.75
NPIPB4-208	ENST00000537951	AGBL2	Q5U5Z8	902 aa		10.34	□□□□□ -0.75
NPIPB4-208	ENST00000537951	ZNF574	Q6ZN55	896 aa	Predicted RBP	10.34	□□□□□ -0.75
NPIPB4-208	ENST00000537951	ADAMTSL2	Q86TH1	951 aa		10.34	□□□□□ -0.75
NPIPB4-208	ENST00000537951	SLCO6A1	Q86UG4	719 aa		10.34	□□□□□ -0.75
NPIPB4-208	ENST00000537951	LCA5	Q86VQ0	697 aa		10.34	□□□□□ -0.75
NPIPB4-208	ENST00000537951	RBM12B	Q8IXT5	1001 aa	Known RBP	10.34	□□□□□ -0.75
NPIPB4-208	ENST00000537951	PDPR	Q8NCN5	879 aa		10.34	□□□□□ -0.75
NPIPB4-208	ENST00000537951	IFI44	Q8TCB0	444 aa		10.34	□□□□□ -0.75
NPIPB4-208	ENST00000537951	RSC1A1	Q92681	617 aa		10.34	□□□□□ -0.75
NPIPB4-208	ENST00000537951	RAD51AP1	Q96B01	352 aa		10.34	□□□□□ -0.75
NPIPB4-208	ENST00000537951	RHBDF1	Q96CC6	855 aa		10.34	□□□□□ -0.75
NPIPB4-208	ENST00000537951	FBXL8	Q96CD0	374 aa		10.34	□□□□□ -0.75
NPIPB4-208	ENST00000537951	CCDC3	Q9BQI4	270 aa		10.34	□□□□□ -0.75
NPIPB4-208	ENST00000537951	TMEM79	Q9BSE2	394 aa		10.34	□□□□□ -0.75
NPIPB4-208	ENST00000537951	FAM107B	Q9H098	131 aa		10.34	□□□□□ -0.75
NPIPB4-208	ENST00000537951	STOX2	Q9P2F5	926 aa	Predicted RBP	10.34	□□□□□ -0.75
NPIPB4-208	ENST00000537951	SLC17A7	Q9P2U7	560 aa		10.34	□□□□□ -0.75
NPIPB4-208	ENST00000537951	FTSJ1	Q9UET6	329 aa		10.34	□□□□□ -0.75
NPIPB4-208	ENST00000537951	POLG2	Q9UHN1	485 aa		10.34	□□□□□ -0.75
NPIPB4-208	ENST00000537951	PTBP2	Q9UKA9	531 aa	Known RBP	10.34	□□□□□ -0.75
NPIPB4-208	ENST00000537951	TDRKH	Q9Y2W6	561 aa	Known RBP	10.34	□□□□□ -0.75
NPIPB4-208	ENST00000537951	PLLP	Q9Y342	182 aa		10.34	□□□□□ -0.75
NPIPB4-208	ENST00000537951	ACTL7B	Q9Y614	415 aa		10.34	□□□□□ -0.75
NPIPB4-208	ENST00000537951	COLEC10	Q9Y6Z7	277 aa		10.34	□□□□□ -0.75
NPIPB4-208	ENST00000537951	LAMA5	O15230	3695 aa		10.34	□□□□□ -0.75
NPIPB4-208	ENST00000537951	CCDC189	A1A4V9	331 aa		10.33	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms