RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 SELENOMQ8WWX9 145 aa13.25□□□□□ -0.29
SMG6-203ENST00000536871 STARD8Q92502 1023 aa13.25□□□□□ -0.29
SMG6-203ENST00000536871 VPS33AQ96AX1 596 aa13.25□□□□□ -0.29
SMG6-203ENST00000536871 AP2M1Q96CW1 435 aa13.25□□□□□ -0.29
SMG6-203ENST00000536871 CMTM7Q96FZ5 175 aa13.25□□□□□ -0.29
SMG6-203ENST00000536871 TEX37Q96LM6 180 aa13.25□□□□□ -0.29
SMG6-203ENST00000536871 CDCA3Q99618 268 aaPredicted RBP13.25□□□□□ -0.29
SMG6-203ENST00000536871 CCM2Q9BSQ5 444 aa13.25□□□□□ -0.29
SMG6-203ENST00000536871 TRIM4Q9C037 500 aa13.25□□□□□ -0.29
SMG6-203ENST00000536871 NANOGQ9H9S0 305 aa13.25□□□□□ -0.29
SMG6-203ENST00000536871 TRPV4Q9HBA0 871 aa13.25□□□□□ -0.29
SMG6-203ENST00000536871 CD84Q9UIB8 345 aa13.25□□□□□ -0.29
SMG6-203ENST00000536871 PCDHB3Q9Y5E6 796 aa13.25□□□□□ -0.29
SMG6-203ENST00000536871 ASPDHA6ND91 283 aa13.25□□□□□ -0.29
SMG6-203ENST00000536871 PRMT3O60678 531 aa13.25□□□□□ -0.29
SMG6-203ENST00000536871 CTSLP07711 333 aa13.25□□□□□ -0.29
SMG6-203ENST00000536871 FASP25445 335 aa13.25□□□□□ -0.29
SMG6-203ENST00000536871 ETV3P41162 512 aa13.25□□□□□ -0.29
SMG6-203ENST00000536871 GDF5P43026 501 aa13.25□□□□□ -0.29
SMG6-203ENST00000536871 ERVK-21P61565 698 aa13.25□□□□□ -0.29
SMG6-203ENST00000536871 SEMG2Q02383 582 aa13.25□□□□□ -0.29
SMG6-203ENST00000536871 CREB5Q02930 508 aa13.25□□□□□ -0.29
SMG6-203ENST00000536871 CSTF3Q12996 717 aaKnown RBP13.25□□□□□ -0.29
SMG6-203ENST00000536871 CAPRIN1Q14444 709 aaKnown RBP13.25□□□□□ -0.29
SMG6-203ENST00000536871 DPY19L1Q2PZI1 675 aa13.25□□□□□ -0.29
SMG6-203ENST00000536871 BCL7AQ4VC05 210 aa13.25□□□□□ -0.29
SMG6-203ENST00000536871 TBCELQ5QJ74 424 aa13.25□□□□□ -0.29
SMG6-203ENST00000536871 INTS11Q5TA45 600 aaKnown RBP13.25□□□□□ -0.29
SMG6-203ENST00000536871 TBC1D21Q8IYX1 336 aa13.25□□□□□ -0.29
SMG6-203ENST00000536871 RGL4Q8IZJ4 473 aa13.25□□□□□ -0.29
SMG6-203ENST00000536871 DNAJB14Q8TBM8 379 aa13.25□□□□□ -0.29
SMG6-203ENST00000536871 CSGALNACT1Q8TDX6 532 aa13.25□□□□□ -0.29
SMG6-203ENST00000536871 ING5Q8WYH8 240 aa13.25□□□□□ -0.29
SMG6-203ENST00000536871 SCAMP4Q969E2 229 aa13.25□□□□□ -0.29
SMG6-203ENST00000536871 RAB7BQ96AH8 199 aa13.25□□□□□ -0.29
SMG6-203ENST00000536871 PPWD1Q96BP3 646 aaKnown RBP13.25□□□□□ -0.29
SMG6-203ENST00000536871 DTD2Q96FN9 168 aa13.25□□□□□ -0.29
SMG6-203ENST00000536871 CGREF1Q99674 301 aa13.25□□□□□ -0.29
SMG6-203ENST00000536871 ABCG8Q9H221 673 aa13.25□□□□□ -0.29
SMG6-203ENST00000536871 RMND5AQ9H871 391 aa13.25□□□□□ -0.29
SMG6-203ENST00000536871 KPNA3O00505 521 aaPredicted RBP13.24□□□□□ -0.29
SMG6-203ENST00000536871 TXNDC9O14530 226 aa13.24□□□□□ -0.29
SMG6-203ENST00000536871 ARPC2O15144 300 aa13.24□□□□□ -0.29
SMG6-203ENST00000536871 ERN1O75460 977 aaKnown RBP13.24□□□□□ -0.29
SMG6-203ENST00000536871 CSPG5O95196 566 aa13.24□□□□□ -0.29
SMG6-203ENST00000536871 JUPP14923 745 aa13.24□□□□□ -0.29
SMG6-203ENST00000536871 ATP6V1B2P21281 511 aa13.24□□□□□ -0.29
SMG6-203ENST00000536871 IL12AP29459 219 aa13.24□□□□□ -0.29
SMG6-203ENST00000536871 HNF4AP41235 474 aa13.24□□□□□ -0.29
SMG6-203ENST00000536871 TMEM115Q12893 351 aaPredicted RBP13.24□□□□□ -0.29
SMG6-203ENST00000536871 MAPKAPK3Q16644 382 aa13.24□□□□□ -0.29
SMG6-203ENST00000536871 PTCHD3Q3KNS1 767 aa13.24□□□□□ -0.29
SMG6-203ENST00000536871 CYP2R1Q6VVX0 501 aa13.24□□□□□ -0.29
SMG6-203ENST00000536871 RFLNAQ6ZTI6 216 aa13.24□□□□□ -0.29
SMG6-203ENST00000536871 DET1Q7L5Y6 550 aa13.24□□□□□ -0.29
SMG6-203ENST00000536871 PAPD5Q8NDF8 572 aaKnown RBP13.24□□□□□ -0.29
SMG6-203ENST00000536871 TRPV3Q8NET8 790 aa13.24□□□□□ -0.29
SMG6-203ENST00000536871 ZNF597Q96LX8 424 aa13.24□□□□□ -0.29
SMG6-203ENST00000536871 COQ10AQ96MF6 247 aa13.24□□□□□ -0.29
SMG6-203ENST00000536871 ASB16Q96NS5 453 aa13.24□□□□□ -0.29
SMG6-203ENST00000536871 ACTL8Q9H568 366 aa13.24□□□□□ -0.29
SMG6-203ENST00000536871 CLMPQ9H6B4 373 aa13.24□□□□□ -0.29
SMG6-203ENST00000536871 DYRK4Q9NR20 520 aa13.24□□□□□ -0.29
SMG6-203ENST00000536871 GPRC5BQ9NZH0 403 aa13.24□□□□□ -0.29
SMG6-203ENST00000536871 NDUFA13Q9P0J0 144 aa13.24□□□□□ -0.29
SMG6-203ENST00000536871 CNOT6Q9ULM6 557 aaKnown RBP13.24□□□□□ -0.29
SMG6-203ENST00000536871 KCNE1BA0A087WTH5 132 aa13.23□□□□□ -0.29
SMG6-203ENST00000536871 SLC5A10A0PJK1 596 aa13.23□□□□□ -0.29
SMG6-203ENST00000536871 FFAR3O14843 346 aa13.23□□□□□ -0.29
SMG6-203ENST00000536871 GPR42O15529 346 aa13.23□□□□□ -0.29
SMG6-203ENST00000536871 AKAP10O43572 662 aa13.23□□□□□ -0.29
SMG6-203ENST00000536871 SGTAO43765 313 aa13.23□□□□□ -0.29
SMG6-203ENST00000536871 ZNF26P17031 533 aaPredicted RBP13.23□□□□□ -0.29
SMG6-203ENST00000536871 ATXN3P54252 364 aaPredicted RBP13.23□□□□□ -0.29
SMG6-203ENST00000536871 CLDN8P56748 225 aa13.23□□□□□ -0.29
SMG6-203ENST00000536871 DPTQ07507 201 aa13.23□□□□□ -0.29
SMG6-203ENST00000536871 CBX2Q14781 532 aaPredicted RBP13.23□□□□□ -0.29
SMG6-203ENST00000536871 KIAA0040Q15053 153 aa13.23□□□□□ -0.29
SMG6-203ENST00000536871 FNDC3BQ53EP0 1204 aaKnown RBP13.23□□□□□ -0.29
SMG6-203ENST00000536871 ZNF697Q5TEC3 545 aa13.23□□□□□ -0.29
SMG6-203ENST00000536871 FRG2Q64ET8 278 aa13.23□□□□□ -0.29
SMG6-203ENST00000536871 OR52E8Q6IFG1 317 aa13.23□□□□□ -0.29
SMG6-203ENST00000536871 PPP4R4Q6NUP7 873 aa13.23□□□□□ -0.29
SMG6-203ENST00000536871 FBXL19Q6PCT2 694 aa13.23□□□□□ -0.29
SMG6-203ENST00000536871 DLEU7Q6UYE1 221 aa13.23□□□□□ -0.29
SMG6-203ENST00000536871 NUDT18Q6ZVK8 323 aa13.23□□□□□ -0.29
SMG6-203ENST00000536871 PARS2Q7L3T8 475 aaKnown RBP13.23□□□□□ -0.29
SMG6-203ENST00000536871 KIAA2013Q8IYS2 634 aa13.23□□□□□ -0.29
SMG6-203ENST00000536871 OR52E4Q8NGH9 312 aa13.23□□□□□ -0.29
SMG6-203ENST00000536871 ITFG1Q8TB96 612 aa13.23□□□□□ -0.29
SMG6-203ENST00000536871 CANT1Q8WVQ1 401 aa13.23□□□□□ -0.29
SMG6-203ENST00000536871 SLCO4A1Q96BD0 722 aa13.23□□□□□ -0.29
SMG6-203ENST00000536871 LRCH3Q96II8 777 aa13.23□□□□□ -0.29
SMG6-203ENST00000536871 CCDC115Q96NT0 180 aa13.23□□□□□ -0.29
SMG6-203ENST00000536871 FRG2BQ96QU4 278 aa13.23□□□□□ -0.29
SMG6-203ENST00000536871 C9orf16Q9BUW7 83 aa13.23□□□□□ -0.29
SMG6-203ENST00000536871 ANAPC2Q9UJX6 822 aa13.23□□□□□ -0.29
SMG6-203ENST00000536871 AP4B1Q9Y6B7 739 aa13.23□□□□□ -0.29
SMG6-203ENST00000536871 C17orf113A0A1B0GUU1 675 aa13.23□□□□□ -0.29
SMG6-203ENST00000536871 FADS2P1A8MWK0 482 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms