RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 UPP1Q16831 310 aa5.4□□□□□ -1.54
CLIP1-207ENST00000536634 EDRF1Q3B7T1 1238 aa5.4□□□□□ -1.54
CLIP1-207ENST00000536634 CYP4A22Q5TCH4 519 aa5.4□□□□□ -1.54
CLIP1-207ENST00000536634 PMS2CLQ68D20 193 aa5.4□□□□□ -1.54
CLIP1-207ENST00000536634 ADGRG6Q86SQ4 1221 aa5.4□□□□□ -1.54
CLIP1-207ENST00000536634 LURAP1LQ8IV03 231 aa5.4□□□□□ -1.54
CLIP1-207ENST00000536634 ARID3BQ8IVW6 561 aaPredicted RBP5.4□□□□□ -1.54
CLIP1-207ENST00000536634 LMO3Q8TAP4 145 aa5.4□□□□□ -1.54
CLIP1-207ENST00000536634 TBCKQ8TEA7 893 aa5.4□□□□□ -1.54
CLIP1-207ENST00000536634 TCP11Q8WWU5 503 aa5.4□□□□□ -1.54
CLIP1-207ENST00000536634 TXNDC15Q96J42 360 aa5.4□□□□□ -1.54
CLIP1-207ENST00000536634 UBXN10Q96LJ8 280 aa5.4□□□□□ -1.54
CLIP1-207ENST00000536634 LXNQ9BS40 222 aa5.4□□□□□ -1.54
CLIP1-207ENST00000536634 TM6SF1Q9BZW5 370 aa5.4□□□□□ -1.54
CLIP1-207ENST00000536634 LSG1Q9H089 658 aaKnown RBP5.4□□□□□ -1.54
CLIP1-207ENST00000536634 CDT1Q9H211 546 aa5.4□□□□□ -1.54
CLIP1-207ENST00000536634 PDZD7Q9H5P4 517 aa5.4□□□□□ -1.54
CLIP1-207ENST00000536634 FBRSL1Q9HCM7 1045 aaKnown RBP5.4□□□□□ -1.54
CLIP1-207ENST00000536634 ASAH2Q9NR71 780 aa5.4□□□□□ -1.54
CLIP1-207ENST00000536634 TMEM160Q9NX00 188 aa5.4□□□□□ -1.54
CLIP1-207ENST00000536634 WWOXQ9NZC7 414 aa5.4□□□□□ -1.54
CLIP1-207ENST00000536634 VPS54Q9P1Q0 977 aa5.4□□□□□ -1.54
CLIP1-207ENST00000536634 AGO1Q9UL18 857 aaKnown RBP5.4□□□□□ -1.54
CLIP1-207ENST00000536634 PTPRBP23467 1997 aa5.4□□□□□ -1.55
CLIP1-207ENST00000536634 PCDH15Q96QU1 1955 aa5.39□□□□□ -1.55
CLIP1-207ENST00000536634 A0A1B0GVM2 712 aa5.39□□□□□ -1.55
CLIP1-207ENST00000536634 DYTNA2CJ06 578 aa5.39□□□□□ -1.55
CLIP1-207ENST00000536634 ANTXRLA6NF34 631 aa5.39□□□□□ -1.55
CLIP1-207ENST00000536634 KCNJ13O60928 360 aa5.39□□□□□ -1.55
CLIP1-207ENST00000536634 RHOBTB1O94844 696 aa5.39□□□□□ -1.55
CLIP1-207ENST00000536634 FCGR1AP12314 374 aa5.39□□□□□ -1.55
CLIP1-207ENST00000536634 HSD3B1P14060 373 aa5.39□□□□□ -1.55
CLIP1-207ENST00000536634 EDN2P20800 178 aa5.39□□□□□ -1.55
CLIP1-207ENST00000536634 CNTFP26441 200 aa5.39□□□□□ -1.55
CLIP1-207ENST00000536634 GNA11P29992 359 aa5.39□□□□□ -1.55
CLIP1-207ENST00000536634 C21orf33P30042 268 aaPredicted RBP5.39□□□□□ -1.55
CLIP1-207ENST00000536634 BLKP51451 505 aa5.39□□□□□ -1.55
CLIP1-207ENST00000536634 KRTAP10-7P60409 375 aaPredicted RBP5.39□□□□□ -1.55
CLIP1-207ENST00000536634 POU5F1BQ06416 359 aa5.39□□□□□ -1.55
CLIP1-207ENST00000536634 NCBP1Q09161 790 aaKnown RBP5.39□□□□□ -1.55
CLIP1-207ENST00000536634 KIF5AQ12840 1032 aa5.39□□□□□ -1.55
CLIP1-207ENST00000536634 PPP2R5CQ13362 524 aa5.39□□□□□ -1.55
CLIP1-207ENST00000536634 MXD4Q14582 209 aaPredicted RBP5.39□□□□□ -1.55
CLIP1-207ENST00000536634 NECTIN1Q15223 517 aa5.39□□□□□ -1.55
CLIP1-207ENST00000536634 XKR9Q5GH70 373 aa5.39□□□□□ -1.55
CLIP1-207ENST00000536634 ARRDC2Q8TBH0 407 aa5.39□□□□□ -1.55
CLIP1-207ENST00000536634 FAM216AQ8WUB2 273 aa5.39□□□□□ -1.55
CLIP1-207ENST00000536634 SLC25A33Q9BSK2 321 aa5.39□□□□□ -1.55
CLIP1-207ENST00000536634 POLR3CQ9BUI4 534 aaPredicted RBP5.39□□□□□ -1.55
CLIP1-207ENST00000536634 NFKBIZQ9BYH8 718 aa5.39□□□□□ -1.55
CLIP1-207ENST00000536634 HPS4Q9NQG7 708 aa5.39□□□□□ -1.55
CLIP1-207ENST00000536634 OCIAD1Q9NX40 245 aa5.39□□□□□ -1.55
CLIP1-207ENST00000536634 ANKRD10Q9NXR5 420 aa5.39□□□□□ -1.55
CLIP1-207ENST00000536634 LUZP4Q9P127 313 aa5.39□□□□□ -1.55
CLIP1-207ENST00000536634 FBXL5Q9UKA1 691 aa5.39□□□□□ -1.55
CLIP1-207ENST00000536634 YIPF1Q9Y548 306 aa5.39□□□□□ -1.55
CLIP1-207ENST00000536634 PCDHGB5Q9Y5G0 923 aa5.39□□□□□ -1.55
CLIP1-207ENST00000536634 UBR5O95071 2799 aaPredicted RBP5.39□□□□□ -1.55
CLIP1-207ENST00000536634 TEP1Q99973 2627 aaKnown RBP5.39□□□□□ -1.55
CLIP1-207ENST00000536634 COL6A6A6NMZ7 2263 aa5.39□□□□□ -1.55
CLIP1-207ENST00000536634 KNL1Q8NG31 2342 aa5.39□□□□□ -1.55
CLIP1-207ENST00000536634 DENND4CQ5VZ89 1909 aa5.38□□□□□ -1.55
CLIP1-207ENST00000536634 ZNF638Q14966 1978 aaKnown RBP5.38□□□□□ -1.55
CLIP1-207ENST00000536634 A0A087WWV3 80 aa5.38□□□□□ -1.55
CLIP1-207ENST00000536634 IGLV5-52A0A0A0MRZ9 124 aa5.38□□□□□ -1.55
CLIP1-207ENST00000536634 ARHGAP10A1A4S6 786 aa5.38□□□□□ -1.55
CLIP1-207ENST00000536634 EIF4E1BA6NMX2 242 aaKnown RBP5.38□□□□□ -1.55
CLIP1-207ENST00000536634 ATP2C2O75185 946 aa5.38□□□□□ -1.55
CLIP1-207ENST00000536634 APBB3O95704 486 aa5.38□□□□□ -1.55
CLIP1-207ENST00000536634 TFPIP10646 304 aa5.38□□□□□ -1.55
CLIP1-207ENST00000536634 SRD5A1P18405 259 aa5.38□□□□□ -1.55
CLIP1-207ENST00000536634 MYF6P23409 242 aa5.38□□□□□ -1.55
CLIP1-207ENST00000536634 GRSF1Q12849 480 aaKnown RBP eCLIP5.38□□□□□ -1.55
CLIP1-207ENST00000536634 TFDP1Q14186 410 aa5.38□□□□□ -1.55
CLIP1-207ENST00000536634 KARSQ15046 597 aaKnown RBP5.38□□□□□ -1.55
CLIP1-207ENST00000536634 TAF12Q16514 161 aa5.38□□□□□ -1.55
CLIP1-207ENST00000536634 CAPRIN2Q6IMN6 1127 aaKnown RBP5.38□□□□□ -1.55
CLIP1-207ENST00000536634 TYW3Q6IPR3 259 aaKnown RBP5.38□□□□□ -1.55
CLIP1-207ENST00000536634 RETSATQ6NUM9 610 aa5.38□□□□□ -1.55
CLIP1-207ENST00000536634 PRSS57Q6UWY2 283 aa5.38□□□□□ -1.55
CLIP1-207ENST00000536634 C4orf19Q8IY42 314 aa5.38□□□□□ -1.55
CLIP1-207ENST00000536634 EXOC8Q8IYI6 725 aa5.38□□□□□ -1.55
CLIP1-207ENST00000536634 ELMOD1Q8N336 334 aa5.38□□□□□ -1.55
CLIP1-207ENST00000536634 PLD5Q8N7P1 536 aa5.38□□□□□ -1.55
CLIP1-207ENST00000536634 LEMD2Q8NC56 503 aa5.38□□□□□ -1.55
CLIP1-207ENST00000536634 BEST2Q8NFU1 509 aa5.38□□□□□ -1.55
CLIP1-207ENST00000536634 RPLP0P6Q8NHW5 317 aa5.38□□□□□ -1.55
CLIP1-207ENST00000536634 CCDC12Q8WUD4 166 aaPredicted RBP5.38□□□□□ -1.55
CLIP1-207ENST00000536634 PGLYRP2Q96PD5 576 aa5.38□□□□□ -1.55
CLIP1-207ENST00000536634 POLR3FQ9H1D9 316 aaPredicted RBP5.38□□□□□ -1.55
CLIP1-207ENST00000536634 FZD8Q9H461 694 aa5.38□□□□□ -1.55
CLIP1-207ENST00000536634 KCNMB3Q9NPA1 279 aa5.38□□□□□ -1.55
CLIP1-207ENST00000536634 PEMTQ9UBM1 199 aa5.38□□□□□ -1.55
CLIP1-207ENST00000536634 NDRG3Q9UGV2 375 aa5.38□□□□□ -1.55
CLIP1-207ENST00000536634 DDX25Q9UHL0 483 aaKnown RBP5.38□□□□□ -1.55
CLIP1-207ENST00000536634 NAP1L2Q9ULW6 460 aaPredicted RBP5.38□□□□□ -1.55
CLIP1-207ENST00000536634 ATXN2Q99700 1313 aaKnown RBP5.38□□□□□ -1.55
CLIP1-207ENST00000536634 OBSL1O75147 1896 aa5.38□□□□□ -1.55
CLIP1-207ENST00000536634 HELZP42694 1942 aaKnown RBP5.38□□□□□ -1.55
CLIP1-207ENST00000536634 NID2Q14112 1375 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms