RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 SEPHS1P49903 392 aa10.96□□□□□ -0.65
TNFRSF1A-208ENST00000536194 TAS2R39P59534 338 aa10.96□□□□□ -0.65
TNFRSF1A-208ENST00000536194 SH3BP2P78314 561 aa10.96□□□□□ -0.65
TNFRSF1A-208ENST00000536194 ZNF460Q14592 562 aa10.96□□□□□ -0.65
TNFRSF1A-208ENST00000536194 TBC1D25Q3MII6 688 aa10.96□□□□□ -0.65
TNFRSF1A-208ENST00000536194 CACHD1Q5VU97 1274 aa10.96□□□□□ -0.65
TNFRSF1A-208ENST00000536194 UGT3A1Q6NUS8 523 aa10.96□□□□□ -0.65
TNFRSF1A-208ENST00000536194 CEP97Q8IW35 865 aa10.96□□□□□ -0.65
TNFRSF1A-208ENST00000536194 CTAGE3PQ8IX95 158 aa10.96□□□□□ -0.65
TNFRSF1A-208ENST00000536194 IFT20Q8IY31 132 aa10.96□□□□□ -0.65
TNFRSF1A-208ENST00000536194 C2orf73Q8N5S3 287 aaPredicted RBP10.96□□□□□ -0.65
TNFRSF1A-208ENST00000536194 KDF1Q8NAX2 398 aaPredicted RBP10.96□□□□□ -0.65
TNFRSF1A-208ENST00000536194 ASB11Q8WXH4 323 aa10.96□□□□□ -0.65
TNFRSF1A-208ENST00000536194 ZCCHC14Q8WYQ9 949 aaKnown RBP10.96□□□□□ -0.65
TNFRSF1A-208ENST00000536194 KLHL6Q8WZ60 621 aa10.96□□□□□ -0.65
TNFRSF1A-208ENST00000536194 CDKL2Q92772 493 aa10.96□□□□□ -0.65
TNFRSF1A-208ENST00000536194 OR2A14Q96R47 310 aa10.96□□□□□ -0.65
TNFRSF1A-208ENST00000536194 RBBP8Q99708 897 aa10.96□□□□□ -0.65
TNFRSF1A-208ENST00000536194 CPNE1Q99829 537 aa10.96□□□□□ -0.65
TNFRSF1A-208ENST00000536194 FUT8Q9BYC5 575 aa10.96□□□□□ -0.65
TNFRSF1A-208ENST00000536194 ANKZF1Q9H8Y5 726 aa10.96□□□□□ -0.65
TNFRSF1A-208ENST00000536194 CAB39LQ9H9S4 337 aa10.96□□□□□ -0.65
TNFRSF1A-208ENST00000536194 APMAPQ9HDC9 416 aa10.96□□□□□ -0.65
TNFRSF1A-208ENST00000536194 ACTR10Q9NZ32 417 aa10.96□□□□□ -0.65
TNFRSF1A-208ENST00000536194 OR6C2Q9NZP2 312 aa10.96□□□□□ -0.65
TNFRSF1A-208ENST00000536194 ADAMTS6Q9UKP5 1117 aa10.96□□□□□ -0.65
TNFRSF1A-208ENST00000536194 IKZF3Q9UKT9 509 aa10.96□□□□□ -0.65
TNFRSF1A-208ENST00000536194 MTO1Q9Y2Z2 717 aaKnown RBP10.96□□□□□ -0.65
TNFRSF1A-208ENST00000536194 FREM2Q5SZK8 3169 aa10.95□□□□□ -0.66
TNFRSF1A-208ENST00000536194 C2orf74A8MZ97 194 aa10.95□□□□□ -0.66
TNFRSF1A-208ENST00000536194 C9orf172C9J069 976 aa10.95□□□□□ -0.66
TNFRSF1A-208ENST00000536194 MYO1CO00159 1063 aa10.95□□□□□ -0.66
TNFRSF1A-208ENST00000536194 EIF3FO00303 357 aaPredicted RBP10.95□□□□□ -0.66
TNFRSF1A-208ENST00000536194 RASGRF2O14827 1237 aa10.95□□□□□ -0.66
TNFRSF1A-208ENST00000536194 PRICKLE3O43900 615 aaPredicted RBP10.95□□□□□ -0.66
TNFRSF1A-208ENST00000536194 PRAMEF10O60809 474 aa10.95□□□□□ -0.66
TNFRSF1A-208ENST00000536194 ACSL3O95573 720 aa10.95□□□□□ -0.66
TNFRSF1A-208ENST00000536194 ERGP11308 486 aa10.95□□□□□ -0.66
TNFRSF1A-208ENST00000536194 PVRP15151 417 aa10.95□□□□□ -0.66
TNFRSF1A-208ENST00000536194 UGT2B7P16662 529 aa10.95□□□□□ -0.66
TNFRSF1A-208ENST00000536194 ZNF37AP17032 561 aaPredicted RBP10.95□□□□□ -0.66
TNFRSF1A-208ENST00000536194 NELFEP18615 380 aaKnown RBP10.95□□□□□ -0.66
TNFRSF1A-208ENST00000536194 SAT1P21673 171 aa10.95□□□□□ -0.66
TNFRSF1A-208ENST00000536194 GP5P40197 560 aa10.95□□□□□ -0.66
TNFRSF1A-208ENST00000536194 CCNFP41002 786 aa10.95□□□□□ -0.66
TNFRSF1A-208ENST00000536194 SKIV2L2P42285 1042 aaKnown RBP10.95□□□□□ -0.66
TNFRSF1A-208ENST00000536194 RAB28P51157 221 aa10.95□□□□□ -0.66
TNFRSF1A-208ENST00000536194 MAPK10P53779 464 aa10.95□□□□□ -0.66
TNFRSF1A-208ENST00000536194 PRKAA1Q13131 559 aa10.95□□□□□ -0.66
TNFRSF1A-208ENST00000536194 PDAP1Q13442 181 aaKnown RBP10.95□□□□□ -0.66
TNFRSF1A-208ENST00000536194 FASTKQ14296 549 aaKnown RBP10.95□□□□□ -0.66
TNFRSF1A-208ENST00000536194 KCNAB1Q14722 419 aa10.95□□□□□ -0.66
TNFRSF1A-208ENST00000536194 ARMC6Q6NXE6 501 aa10.95□□□□□ -0.66
TNFRSF1A-208ENST00000536194 CLEC14AQ86T13 490 aa10.95□□□□□ -0.66
TNFRSF1A-208ENST00000536194 TRIM73Q86UV7 250 aa10.95□□□□□ -0.66
TNFRSF1A-208ENST00000536194 TAX1BP1Q86VP1 789 aa10.95□□□□□ -0.66
TNFRSF1A-208ENST00000536194 PROSER1Q86XN7 944 aa10.95□□□□□ -0.66
TNFRSF1A-208ENST00000536194 FAM129CQ86XR2 697 aa10.95□□□□□ -0.66
TNFRSF1A-208ENST00000536194 LSMEM2Q8N112 164 aa10.95□□□□□ -0.66
TNFRSF1A-208ENST00000536194 PPM1NQ8N819 430 aa10.95□□□□□ -0.66
TNFRSF1A-208ENST00000536194 OR2L8Q8NGY9 312 aa10.95□□□□□ -0.66
TNFRSF1A-208ENST00000536194 USP7Q93009 1102 aa10.95□□□□□ -0.66
TNFRSF1A-208ENST00000536194 RAD51AP1Q96B01 352 aa10.95□□□□□ -0.66
TNFRSF1A-208ENST00000536194 LINGO1Q96FE5 620 aa10.95□□□□□ -0.66
TNFRSF1A-208ENST00000536194 SLC41A2Q96JW4 573 aa10.95□□□□□ -0.66
TNFRSF1A-208ENST00000536194 FOPNLQ96NB1 174 aa10.95□□□□□ -0.66
TNFRSF1A-208ENST00000536194 CD180Q99467 661 aa10.95□□□□□ -0.66
TNFRSF1A-208ENST00000536194 PKP4Q99569 1192 aa10.95□□□□□ -0.66
TNFRSF1A-208ENST00000536194 GPR22Q99680 433 aa10.95□□□□□ -0.66
TNFRSF1A-208ENST00000536194 PITPNM3Q9BZ71 974 aa10.95□□□□□ -0.66
TNFRSF1A-208ENST00000536194 TXLNGYQ9BZA5 131 aa10.95□□□□□ -0.66
TNFRSF1A-208ENST00000536194 FOXJ2Q9P0K8 574 aa10.95□□□□□ -0.66
TNFRSF1A-208ENST00000536194 A0A1W2PPV9 198 aa10.94□□□□□ -0.66
TNFRSF1A-208ENST00000536194 HMX2A2RU54 273 aa10.94□□□□□ -0.66
TNFRSF1A-208ENST00000536194 TMEM8BA6NDV4 472 aa10.94□□□□□ -0.66
TNFRSF1A-208ENST00000536194 B4E171 279 aa10.94□□□□□ -0.66
TNFRSF1A-208ENST00000536194 MATN2O00339 956 aa10.94□□□□□ -0.66
TNFRSF1A-208ENST00000536194 FOLR1P15328 257 aa10.94□□□□□ -0.66
TNFRSF1A-208ENST00000536194 ST6GAL1P15907 406 aa10.94□□□□□ -0.66
TNFRSF1A-208ENST00000536194 PSMB5P28074 263 aa10.94□□□□□ -0.66
TNFRSF1A-208ENST00000536194 RBMS1P29558 406 aaKnown RBP10.94□□□□□ -0.66
TNFRSF1A-208ENST00000536194 SLC5A2P31639 672 aa10.94□□□□□ -0.66
TNFRSF1A-208ENST00000536194 GMPRP36959 345 aa10.94□□□□□ -0.66
TNFRSF1A-208ENST00000536194 TSPAN7P41732 249 aa10.94□□□□□ -0.66
TNFRSF1A-208ENST00000536194 MLLT3P42568 568 aaPredicted RBP10.94□□□□□ -0.66
TNFRSF1A-208ENST00000536194 ERVPABLB-1P60509 514 aa10.94□□□□□ -0.66
TNFRSF1A-208ENST00000536194 MC2RQ01718 297 aa10.94□□□□□ -0.66
TNFRSF1A-208ENST00000536194 NAB1Q13506 487 aa10.94□□□□□ -0.66
TNFRSF1A-208ENST00000536194 ZIC1Q15915 447 aa10.94□□□□□ -0.66
TNFRSF1A-208ENST00000536194 PHKG1Q16816 387 aa10.94□□□□□ -0.66
TNFRSF1A-208ENST00000536194 ANKS6Q68DC2 871 aa10.94□□□□□ -0.66
TNFRSF1A-208ENST00000536194 SPESP1Q6UW49 350 aa10.94□□□□□ -0.66
TNFRSF1A-208ENST00000536194 CEP128Q6ZU80 1094 aa10.94□□□□□ -0.66
TNFRSF1A-208ENST00000536194 FAM20CQ8IXL6 584 aa10.94□□□□□ -0.66
TNFRSF1A-208ENST00000536194 FBXO15Q8NCQ5 510 aaPredicted RBP10.94□□□□□ -0.66
TNFRSF1A-208ENST00000536194 OR9A1PQ8NGU1 263 aa10.94□□□□□ -0.66
TNFRSF1A-208ENST00000536194 UHMK1Q8TAS1 419 aaKnown RBP10.94□□□□□ -0.66
TNFRSF1A-208ENST00000536194 HMGCLL1Q8TB92 370 aa10.94□□□□□ -0.66
TNFRSF1A-208ENST00000536194 ANKRD49Q8WVL7 239 aa10.94□□□□□ -0.66
TNFRSF1A-208ENST00000536194 UBXN4Q92575 508 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms