RNA–Protein interactions for RNA: ENST00000535967.5

DDB1-207, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,404 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-207ENST00000535967 VPS39Q96JC1 886 aa12.33□□□□□ -0.44
DDB1-207ENST00000535967 DEPDC7Q96QD5 511 aa12.33□□□□□ -0.44
DDB1-207ENST00000535967 CYTH2Q99418 400 aa12.33□□□□□ -0.44
DDB1-207ENST00000535967 NDNQ99608 321 aa12.33□□□□□ -0.44
DDB1-207ENST00000535967 GPR21Q99679 349 aa12.33□□□□□ -0.44
DDB1-207ENST00000535967 RBBP8Q99708 897 aa12.33□□□□□ -0.44
DDB1-207ENST00000535967 TRIT1Q9H3H1 467 aaKnown RBP12.33□□□□□ -0.44
DDB1-207ENST00000535967 SYNDIG1Q9H7V2 258 aa12.33□□□□□ -0.44
DDB1-207ENST00000535967 ASCL3Q9NQ33 180 aa12.33□□□□□ -0.44
DDB1-207ENST00000535967 POLG2Q9UHN1 485 aa12.33□□□□□ -0.44
DDB1-207ENST00000535967 ASF1AQ9Y294 204 aa12.33□□□□□ -0.44
DDB1-207ENST00000535967 CFAP20Q9Y6A4 193 aaKnown RBP12.33□□□□□ -0.44
DDB1-207ENST00000535967 COL12A1Q99715 3063 aa12.32□□□□□ -0.44
DDB1-207ENST00000535967 FAM95CA0A1B0GW59 222 aa12.32□□□□□ -0.44
DDB1-207ENST00000535967 CXorf49A8MYA2 514 aaPredicted RBP12.32□□□□□ -0.44
DDB1-207ENST00000535967 B4GAT1O43505 415 aa12.32□□□□□ -0.44
DDB1-207ENST00000535967 CSO75390 466 aaKnown RBP12.32□□□□□ -0.44
DDB1-207ENST00000535967 MPC1LP0DKB6 136 aa12.32□□□□□ -0.44
DDB1-207ENST00000535967 CAPZBP47756 277 aa12.32□□□□□ -0.44
DDB1-207ENST00000535967 LIMK2P53671 638 aa12.32□□□□□ -0.44
DDB1-207ENST00000535967 PMS2P54278 862 aa12.32□□□□□ -0.44
DDB1-207ENST00000535967 MN1Q10571 1320 aaPredicted RBP12.32□□□□□ -0.44
DDB1-207ENST00000535967 PLCL1Q15111 1095 aa12.32□□□□□ -0.44
DDB1-207ENST00000535967 KLHL38Q2WGJ6 581 aa12.32□□□□□ -0.44
DDB1-207ENST00000535967 GRTP1Q5TC63 336 aa12.32□□□□□ -0.44
DDB1-207ENST00000535967 HECTD2Q5U5R9 776 aa12.32□□□□□ -0.44
DDB1-207ENST00000535967 DCUN1D3Q8IWE4 304 aa12.32□□□□□ -0.44
DDB1-207ENST00000535967 Q8N9G6 341 aaPredicted RBP12.32□□□□□ -0.44
DDB1-207ENST00000535967 SIDT2Q8NBJ9 832 aaKnown RBP12.32□□□□□ -0.44
DDB1-207ENST00000535967 FAM136AQ96C01 138 aa12.32□□□□□ -0.44
DDB1-207ENST00000535967 FOPNLQ96NB1 174 aa12.32□□□□□ -0.44
DDB1-207ENST00000535967 FERD3LQ96RJ6 166 aa12.32□□□□□ -0.44
DDB1-207ENST00000535967 RAB33BQ9H082 229 aa12.32□□□□□ -0.44
DDB1-207ENST00000535967 POPDC3Q9HBV1 291 aa12.32□□□□□ -0.44
DDB1-207ENST00000535967 SLC24A2Q9UI40 661 aa12.32□□□□□ -0.44
DDB1-207ENST00000535967 A0A087WUV0 522 aaPredicted RBP12.31□□□□□ -0.44
DDB1-207ENST00000535967 TMX2-CTNND1H3BSU7 103 aa12.31□□□□□ -0.44
DDB1-207ENST00000535967 UBXN7O94888 489 aa12.31□□□□□ -0.44
DDB1-207ENST00000535967 MATN4O95460 622 aa12.31□□□□□ -0.44
DDB1-207ENST00000535967 ACSL3O95573 720 aa12.31□□□□□ -0.44
DDB1-207ENST00000535967 MYBL2P10244 700 aa12.31□□□□□ -0.44
DDB1-207ENST00000535967 CD1CP29017 333 aa12.31□□□□□ -0.44
DDB1-207ENST00000535967 SPRP35270 261 aaPredicted RBP12.31□□□□□ -0.44
DDB1-207ENST00000535967 CCNFP41002 786 aa12.31□□□□□ -0.44
DDB1-207ENST00000535967 RGS4P49798 205 aa12.31□□□□□ -0.44
DDB1-207ENST00000535967 CDKN2DP55273 166 aa12.31□□□□□ -0.44
DDB1-207ENST00000535967 WDR93Q6P2C0 686 aa12.31□□□□□ -0.44
DDB1-207ENST00000535967 WDR74Q6RFH5 385 aaPredicted RBP12.31□□□□□ -0.44
DDB1-207ENST00000535967 PIM3Q86V86 326 aa12.31□□□□□ -0.44
DDB1-207ENST00000535967 ZNF761Q86XN6 746 aaPredicted RBP12.31□□□□□ -0.44
DDB1-207ENST00000535967 GSPT2Q8IYD1 628 aaKnown RBP12.31□□□□□ -0.44
DDB1-207ENST00000535967 PPM1NQ8N819 430 aa12.31□□□□□ -0.44
DDB1-207ENST00000535967 OR5AR1Q8NGP9 310 aa12.31□□□□□ -0.44
DDB1-207ENST00000535967 MAGEC3Q8TD91 643 aa12.31□□□□□ -0.44
DDB1-207ENST00000535967 TTC9Q92623 222 aa12.31□□□□□ -0.44
DDB1-207ENST00000535967 TSPAN17Q96FV3 270 aa12.31□□□□□ -0.44
DDB1-207ENST00000535967 ATXN7L3BQ96GX2 97 aa12.31□□□□□ -0.44
DDB1-207ENST00000535967 ELMO2Q96JJ3 720 aa12.31□□□□□ -0.44
DDB1-207ENST00000535967 ZNF578Q96N58 590 aaPredicted RBP12.31□□□□□ -0.44
DDB1-207ENST00000535967 TMEM74Q96NL1 305 aa12.31□□□□□ -0.44
DDB1-207ENST00000535967 GPR22Q99680 433 aa12.31□□□□□ -0.44
DDB1-207ENST00000535967 SLC30A3Q99726 388 aa12.31□□□□□ -0.44
DDB1-207ENST00000535967 HGH1Q9BTY7 390 aa12.31□□□□□ -0.44
DDB1-207ENST00000535967 RAB11FIP5Q9BXF6 653 aa12.31□□□□□ -0.44
DDB1-207ENST00000535967 TBC1D10AQ9BXI6 508 aa12.31□□□□□ -0.44
DDB1-207ENST00000535967 TXLNGYQ9BZA5 131 aa12.31□□□□□ -0.44
DDB1-207ENST00000535967 ZMYND15Q9H091 742 aa12.31□□□□□ -0.44
DDB1-207ENST00000535967 TFB2MQ9H5Q4 396 aaKnown RBP12.31□□□□□ -0.44
DDB1-207ENST00000535967 GALPQ9UBC7 116 aa12.31□□□□□ -0.44
DDB1-207ENST00000535967 VWA7Q9Y334 891 aa12.31□□□□□ -0.44
DDB1-207ENST00000535967 PCM1Q15154 2024 aa12.31□□□□□ -0.44
DDB1-207ENST00000535967 FLNCQ14315 2725 aa12.31□□□□□ -0.44
DDB1-207ENST00000535967 SNRNP200O75643 2136 aaKnown RBP12.3□□□□□ -0.44
DDB1-207ENST00000535967 ANKRD12Q6UB98 2062 aa12.3□□□□□ -0.44
DDB1-207ENST00000535967 MATN2O00339 956 aa12.3□□□□□ -0.44
DDB1-207ENST00000535967 KLK10O43240 276 aa12.3□□□□□ -0.44
DDB1-207ENST00000535967 RIPK2O43353 540 aa12.3□□□□□ -0.44
DDB1-207ENST00000535967 FAM153BP0C7A2 387 aa12.3□□□□□ -0.44
DDB1-207ENST00000535967 CCKBRP32239 447 aa12.3□□□□□ -0.44
DDB1-207ENST00000535967 CSF2RBP32927 897 aa12.3□□□□□ -0.44
DDB1-207ENST00000535967 SHMT2P34897 504 aa12.3□□□□□ -0.44
DDB1-207ENST00000535967 PDX1P52945 283 aa12.3□□□□□ -0.44
DDB1-207ENST00000535967 TMPRSS3P57727 454 aa12.3□□□□□ -0.44
DDB1-207ENST00000535967 TIAL1Q01085 375 aaKnown RBP eCLIP12.3□□□□□ -0.44
DDB1-207ENST00000535967 POU4F1Q01851 419 aa12.3□□□□□ -0.44
DDB1-207ENST00000535967 EFTUD2Q15029 972 aaKnown RBP eCLIP12.3□□□□□ -0.444e-8■■□□□ 13.2
DDB1-207ENST00000535967 NR6A1Q15406 480 aa12.3□□□□□ -0.44
DDB1-207ENST00000535967 AMZ1Q400G9 498 aa12.3□□□□□ -0.44
DDB1-207ENST00000535967 FAM153CQ494X1 144 aa12.3□□□□□ -0.44
DDB1-207ENST00000535967 ACSBG2Q5FVE4 666 aa12.3□□□□□ -0.44
DDB1-207ENST00000535967 TTC23LQ6PF05 361 aa12.3□□□□□ -0.44
DDB1-207ENST00000535967 OOSP2Q86WS3 158 aa12.3□□□□□ -0.44
DDB1-207ENST00000535967 CPNE9Q8IYJ1 553 aa12.3□□□□□ -0.44
DDB1-207ENST00000535967 CNPY4Q8N129 248 aa12.3□□□□□ -0.44
DDB1-207ENST00000535967 OR4D9Q8NGE8 314 aa12.3□□□□□ -0.44
DDB1-207ENST00000535967 OR52E1Q8NGJ3 308 aa12.3□□□□□ -0.44
DDB1-207ENST00000535967 SKA2Q8WVK7 121 aaPredicted RBP12.3□□□□□ -0.44
DDB1-207ENST00000535967 KCNE4Q8WWG9 221 aa12.3□□□□□ -0.44
DDB1-207ENST00000535967 OLFM1Q99784 485 aa12.3□□□□□ -0.44
DDB1-207ENST00000535967 POLR1BQ9H9Y6 1135 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms