RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 IKZF3Q9UKT9 509 aa11.7□□□□□ -0.54
CHD4-203ENST00000535717 IKBKGQ9Y6K9 419 aa11.7□□□□□ -0.54
CHD4-203ENST00000535717 FRYQ5TBA9 3013 aa11.69□□□□□ -0.54
CHD4-203ENST00000535717 MYO1CO00159 1063 aa11.69□□□□□ -0.54
CHD4-203ENST00000535717 RASGRF2O14827 1237 aa11.69□□□□□ -0.54
CHD4-203ENST00000535717 KIF1CO43896 1103 aaKnown RBP11.69□□□□□ -0.54
CHD4-203ENST00000535717 KDM1AO60341 852 aa11.69□□□□□ -0.54
CHD4-203ENST00000535717 CATP04040 527 aaKnown RBP11.69□□□□□ -0.54
CHD4-203ENST00000535717 SHBGP04278 402 aa11.69□□□□□ -0.54
CHD4-203ENST00000535717 C8GP07360 202 aa11.69□□□□□ -0.54
CHD4-203ENST00000535717 THRAP10827 490 aa11.69□□□□□ -0.54
CHD4-203ENST00000535717 CCKBRP32239 447 aa11.69□□□□□ -0.54
CHD4-203ENST00000535717 GMPRP36959 345 aa11.69□□□□□ -0.54
CHD4-203ENST00000535717 HSD17B3P37058 310 aa11.69□□□□□ -0.54
CHD4-203ENST00000535717 SERPINB9P50453 376 aa11.69□□□□□ -0.54
CHD4-203ENST00000535717 CSRP3P50461 194 aa11.69□□□□□ -0.54
CHD4-203ENST00000535717 RAB28P51157 221 aa11.69□□□□□ -0.54
CHD4-203ENST00000535717 SNAP47Q5SQN1 464 aa11.69□□□□□ -0.54
CHD4-203ENST00000535717 PHF19Q5T6S3 580 aa11.69□□□□□ -0.54
CHD4-203ENST00000535717 ARMC6Q6NXE6 501 aa11.69□□□□□ -0.54
CHD4-203ENST00000535717 IRGCQ6NXR0 463 aa11.69□□□□□ -0.54
CHD4-203ENST00000535717 FAM92BQ6ZTR7 304 aa11.69□□□□□ -0.54
CHD4-203ENST00000535717 UBE2R2Q712K3 238 aaPredicted RBP11.69□□□□□ -0.54
CHD4-203ENST00000535717 SPATA6LQ8N4H0 392 aa11.69□□□□□ -0.54
CHD4-203ENST00000535717 LINC01555Q8NAE3 123 aa11.69□□□□□ -0.54
CHD4-203ENST00000535717 FBXO15Q8NCQ5 510 aaPredicted RBP11.69□□□□□ -0.54
CHD4-203ENST00000535717 RCBTB1Q8NDN9 531 aa11.69□□□□□ -0.54
CHD4-203ENST00000535717 OR9A1PQ8NGU1 263 aa11.69□□□□□ -0.54
CHD4-203ENST00000535717 MAGEC3Q8TD91 643 aa11.69□□□□□ -0.54
CHD4-203ENST00000535717 DENND1AQ8TEH3 1009 aa11.69□□□□□ -0.54
CHD4-203ENST00000535717 CAVIN3Q969G5 261 aa11.69□□□□□ -0.54
CHD4-203ENST00000535717 ZDHHC12Q96GR4 267 aa11.69□□□□□ -0.54
CHD4-203ENST00000535717 PKP4Q99569 1192 aa11.69□□□□□ -0.54
CHD4-203ENST00000535717 TWSG1Q9GZX9 223 aa11.69□□□□□ -0.54
CHD4-203ENST00000535717 SPHK1Q9NYA1 384 aa11.69□□□□□ -0.54
CHD4-203ENST00000535717 OR6C2Q9NZP2 312 aa11.69□□□□□ -0.54
CHD4-203ENST00000535717 KLHL3Q9UH77 587 aa11.69□□□□□ -0.54
CHD4-203ENST00000535717 ZNF180Q9UJW8 692 aa11.69□□□□□ -0.54
CHD4-203ENST00000535717 NEUROG3Q9Y4Z2 214 aa11.69□□□□□ -0.54
CHD4-203ENST00000535717 CHD8Q9HCK8 2581 aa11.69□□□□□ -0.54
CHD4-203ENST00000535717 A0A1W2PNU3 283 aaPredicted RBP11.68□□□□□ -0.54
CHD4-203ENST00000535717 GSAPA4D1B5 854 aa11.68□□□□□ -0.54
CHD4-203ENST00000535717 A8MU76 341 aa11.68□□□□□ -0.54
CHD4-203ENST00000535717 TMX2-CTNND1H3BSU7 103 aa11.68□□□□□ -0.54
CHD4-203ENST00000535717 AGRPO00253 132 aa11.68□□□□□ -0.54
CHD4-203ENST00000535717 CDC7O00311 574 aa11.68□□□□□ -0.54
CHD4-203ENST00000535717 SLC16A5O15375 505 aa11.68□□□□□ -0.54
CHD4-203ENST00000535717 ZBTB14O43829 449 aa11.68□□□□□ -0.54
CHD4-203ENST00000535717 ALDOAP04075 364 aaKnown RBP11.68□□□□□ -0.54
CHD4-203ENST00000535717 TUBBP07437 444 aa11.68□□□□□ -0.54
CHD4-203ENST00000535717 CHRM5P08912 532 aaPredicted RBP11.68□□□□□ -0.54
CHD4-203ENST00000535717 SLC35E2BP0CK96 405 aa11.68□□□□□ -0.54
CHD4-203ENST00000535717 CCDC166P0CW27 439 aa11.68□□□□□ -0.54
CHD4-203ENST00000535717 MAP4P27816 1152 aaKnown RBP11.68□□□□□ -0.54
CHD4-203ENST00000535717 CRABP2P29373 138 aa11.68□□□□□ -0.54
CHD4-203ENST00000535717 PEBP1P30086 187 aaKnown RBP11.68□□□□□ -0.54
CHD4-203ENST00000535717 KPNA2P52292 529 aaKnown RBP11.68□□□□□ -0.54
CHD4-203ENST00000535717 SHC2P98077 582 aa11.68□□□□□ -0.54
CHD4-203ENST00000535717 PRKAA1Q13131 559 aa11.68□□□□□ -0.54
CHD4-203ENST00000535717 SP140Q13342 867 aa11.68□□□□□ -0.54
CHD4-203ENST00000535717 CAMK2BQ13554 666 aa11.68□□□□□ -0.54
CHD4-203ENST00000535717 TRA2AQ13595 282 aaKnown RBP eCLIP11.68□□□□□ -0.54
CHD4-203ENST00000535717 C16orf72Q14CZ0 275 aa11.68□□□□□ -0.54
CHD4-203ENST00000535717 PHKG1Q16816 387 aa11.68□□□□□ -0.54
CHD4-203ENST00000535717 ADGRD1Q6QNK2 874 aa11.68□□□□□ -0.54
CHD4-203ENST00000535717 RAPH1Q70E73 1250 aa11.68□□□□□ -0.54
CHD4-203ENST00000535717 TAOK1Q7L7X3 1001 aa11.68□□□□□ -0.54
CHD4-203ENST00000535717 ARHGAP22Q7Z5H3 698 aa11.68□□□□□ -0.54
CHD4-203ENST00000535717 C2orf73Q8N5S3 287 aaPredicted RBP11.68□□□□□ -0.54
CHD4-203ENST00000535717 OR2L8Q8NGY9 312 aa11.68□□□□□ -0.54
CHD4-203ENST00000535717 GRAMD1AQ96CP6 724 aa11.68□□□□□ -0.54
CHD4-203ENST00000535717 LIN37Q96GY3 246 aaPredicted RBP11.68□□□□□ -0.54
CHD4-203ENST00000535717 UBXN10Q96LJ8 280 aa11.68□□□□□ -0.54
CHD4-203ENST00000535717 CCDC77Q9BR77 488 aa11.68□□□□□ -0.54
CHD4-203ENST00000535717 SLC12A9Q9BXP2 914 aa11.68□□□□□ -0.54
CHD4-203ENST00000535717 UNKQ9C0B0 810 aaKnown RBP11.68□□□□□ -0.54
CHD4-203ENST00000535717 STRADBQ9C0K7 418 aa11.68□□□□□ -0.54
CHD4-203ENST00000535717 DERL2Q9GZP9 239 aa11.68□□□□□ -0.54
CHD4-203ENST00000535717 PARVBQ9HBI1 364 aa11.68□□□□□ -0.54
CHD4-203ENST00000535717 SNX15Q9NRS6 342 aa11.68□□□□□ -0.54
CHD4-203ENST00000535717 ACTR10Q9NZ32 417 aa11.68□□□□□ -0.54
CHD4-203ENST00000535717 FETUBQ9UGM5 382 aa11.68□□□□□ -0.54
CHD4-203ENST00000535717 POMT2Q9UKY4 750 aa11.68□□□□□ -0.54
CHD4-203ENST00000535717 PDE10AQ9Y233 779 aa11.68□□□□□ -0.54
CHD4-203ENST00000535717 KIF26BQ2KJY2 2108 aa11.68□□□□□ -0.54
CHD4-203ENST00000535717 IGHV5-51A0A0C4DH38 117 aa11.67□□□□□ -0.54
CHD4-203ENST00000535717 PIPSLA2A3N6 862 aa11.67□□□□□ -0.54
CHD4-203ENST00000535717 PMS2P1A4D2B8 440 aa11.67□□□□□ -0.54
CHD4-203ENST00000535717 NPEPPSL1A6NEC2 478 aa11.67□□□□□ -0.54
CHD4-203ENST00000535717 C2orf74A8MZ97 194 aa11.67□□□□□ -0.54
CHD4-203ENST00000535717 TRIM49D1C9J1S8 452 aa11.67□□□□□ -0.54
CHD4-203ENST00000535717 MATN2O00339 956 aa11.67□□□□□ -0.54
CHD4-203ENST00000535717 KRT38O76015 456 aa11.67□□□□□ -0.54
CHD4-203ENST00000535717 SLC16A8O95907 504 aa11.67□□□□□ -0.54
CHD4-203ENST00000535717 SYF2O95926 243 aaKnown RBP11.67□□□□□ -0.54
CHD4-203ENST00000535717 C2P06681 752 aa11.67□□□□□ -0.54
CHD4-203ENST00000535717 ERGP11308 486 aa11.67□□□□□ -0.54
CHD4-203ENST00000535717 CYP2A7P20853 494 aa11.67□□□□□ -0.54
CHD4-203ENST00000535717 CNTFP26441 200 aa11.67□□□□□ -0.54
CHD4-203ENST00000535717 PRDX3P30048 256 aaKnown RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms