RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 CPA3P15088 417 aa12.02□□□□□ -0.49
SCARB1-204ENST00000535005 VCLP18206 1134 aa12.02□□□□□ -0.49
SCARB1-204ENST00000535005 ITGB6P18564 788 aa12.02□□□□□ -0.49
SCARB1-204ENST00000535005 BGNP21810 368 aa12.02□□□□□ -0.49
SCARB1-204ENST00000535005 CBSP35520 551 aa12.02□□□□□ -0.49
SCARB1-204ENST00000535005 BTKQ06187 659 aa12.02□□□□□ -0.49
SCARB1-204ENST00000535005 KIF19Q2TAC6 998 aa12.02□□□□□ -0.49
SCARB1-204ENST00000535005 SLC23A3Q6PIS1 610 aa12.02□□□□□ -0.49
SCARB1-204ENST00000535005 TMEM207Q6UWW9 146 aa12.02□□□□□ -0.49
SCARB1-204ENST00000535005 PIM3Q86V86 326 aa12.02□□□□□ -0.49
SCARB1-204ENST00000535005 SPATA24Q86W54 205 aa12.02□□□□□ -0.49
SCARB1-204ENST00000535005 UBXN10Q96LJ8 280 aa12.02□□□□□ -0.49
SCARB1-204ENST00000535005 COG4Q9H9E3 785 aa12.02□□□□□ -0.49
SCARB1-204ENST00000535005 CAPN10Q9HC96 672 aa12.02□□□□□ -0.49
SCARB1-204ENST00000535005 SARS2Q9NP81 518 aaKnown RBP12.02□□□□□ -0.49
SCARB1-204ENST00000535005 TIMMDC1Q9NPL8 285 aa12.02□□□□□ -0.49
SCARB1-204ENST00000535005 TM7SF3Q9NS93 570 aa12.02□□□□□ -0.49
SCARB1-204ENST00000535005 TLK1Q9UKI8 766 aa12.02□□□□□ -0.49
SCARB1-204ENST00000535005 SLC6A14Q9UN76 642 aa12.02□□□□□ -0.49
SCARB1-204ENST00000535005 CDYLQ9Y232 598 aa12.02□□□□□ -0.49
SCARB1-204ENST00000535005 ACOT9Q9Y305 439 aa12.02□□□□□ -0.49
SCARB1-204ENST00000535005 GPSM3Q9Y4H4 160 aa12.02□□□□□ -0.49
SCARB1-204ENST00000535005 ENO1P06733 434 aaKnown RBP12.01□□□□□ -0.49
SCARB1-204ENST00000535005 ACP5P13686 325 aa12.01□□□□□ -0.49
SCARB1-204ENST00000535005 ENO3P13929 434 aaPredicted RBP12.01□□□□□ -0.49
SCARB1-204ENST00000535005 ZNF37AP17032 561 aaPredicted RBP12.01□□□□□ -0.49
SCARB1-204ENST00000535005 JUNDP17535 347 aa12.01□□□□□ -0.49
SCARB1-204ENST00000535005 DGKAP23743 735 aa12.01□□□□□ -0.49
SCARB1-204ENST00000535005 RXRGP48443 463 aa12.01□□□□□ -0.49
SCARB1-204ENST00000535005 CHN2P52757 468 aa12.01□□□□□ -0.49
SCARB1-204ENST00000535005 ZNF460Q14592 562 aa12.01□□□□□ -0.49
SCARB1-204ENST00000535005 ADRM1Q16186 407 aa12.01□□□□□ -0.49
SCARB1-204ENST00000535005 INSCQ1MX18 579 aa12.01□□□□□ -0.49
SCARB1-204ENST00000535005 ZNF423Q2M1K9 1284 aa12.01□□□□□ -0.49
SCARB1-204ENST00000535005 PPM1JQ5JR12 505 aa12.01□□□□□ -0.49
SCARB1-204ENST00000535005 METRNLQ641Q3 311 aa12.01□□□□□ -0.49
SCARB1-204ENST00000535005 LRRC8EQ6NSJ5 796 aa12.01□□□□□ -0.49
SCARB1-204ENST00000535005 KLC3Q6P597 504 aa12.01□□□□□ -0.49
SCARB1-204ENST00000535005 NEK10Q6ZWH5 1172 aa12.01□□□□□ -0.49
SCARB1-204ENST00000535005 RAPH1Q70E73 1250 aa12.01□□□□□ -0.49
SCARB1-204ENST00000535005 CHST15Q7LFX5 561 aaPredicted RBP12.01□□□□□ -0.49
SCARB1-204ENST00000535005 RD3Q7Z3Z2 195 aa12.01□□□□□ -0.49
SCARB1-204ENST00000535005 CFAP206Q8IYR0 622 aa12.01□□□□□ -0.49
SCARB1-204ENST00000535005 NKAPQ8N5F7 415 aaKnown RBP12.01□□□□□ -0.49
SCARB1-204ENST00000535005 SUMF1Q8NBK3 374 aa12.01□□□□□ -0.49
SCARB1-204ENST00000535005 GPBAR1Q8TDU6 330 aa12.01□□□□□ -0.49
SCARB1-204ENST00000535005 GLMNQ92990 594 aa12.01□□□□□ -0.49
SCARB1-204ENST00000535005 FAM111AQ96PZ2 611 aa12.01□□□□□ -0.49
SCARB1-204ENST00000535005 ZDHHC5Q9C0B5 715 aa12.01□□□□□ -0.49
SCARB1-204ENST00000535005 DPEP2Q9H4A9 486 aa12.01□□□□□ -0.49
SCARB1-204ENST00000535005 ACSL5Q9ULC5 683 aa12.01□□□□□ -0.49
SCARB1-204ENST00000535005 PLLPQ9Y342 182 aa12.01□□□□□ -0.49
SCARB1-204ENST00000535005 SNX11Q9Y5W9 270 aa12.01□□□□□ -0.49
SCARB1-204ENST00000535005 GPR179Q6PRD1 2367 aa12.01□□□□□ -0.49
SCARB1-204ENST00000535005 DFNA5O60443 496 aa12□□□□□ -0.49
SCARB1-204ENST00000535005 SNNO75324 88 aaPredicted RBP12□□□□□ -0.49
SCARB1-204ENST00000535005 TSPAN12O95859 305 aa12□□□□□ -0.49
SCARB1-204ENST00000535005 RETP07949 1114 aa12□□□□□ -0.49
SCARB1-204ENST00000535005 ZCCHC18P0CG32 403 aa12□□□□□ -0.49
SCARB1-204ENST00000535005 PYGBP11216 843 aa12□□□□□ -0.49
SCARB1-204ENST00000535005 PRDX6P30041 224 aa12□□□□□ -0.49
SCARB1-204ENST00000535005 MAGEA8P43361 318 aa12□□□□□ -0.49
SCARB1-204ENST00000535005 RGS4P49798 205 aa12□□□□□ -0.49
SCARB1-204ENST00000535005 PGGT1BP53609 377 aa12□□□□□ -0.49
SCARB1-204ENST00000535005 IL2P60568 153 aa12□□□□□ -0.49
SCARB1-204ENST00000535005 HNRNPKP61978 463 aaKnown RBP eCLIP12□□□□□ -0.491e-6■■■■□ 24.3
SCARB1-204ENST00000535005 CTBSQ01459 385 aa12□□□□□ -0.49
SCARB1-204ENST00000535005 NFE2L1Q14494 772 aa12□□□□□ -0.49
SCARB1-204ENST00000535005 LPAL2Q16609 132 aa12□□□□□ -0.49
SCARB1-204ENST00000535005 CFAP157Q5JU67 520 aa12□□□□□ -0.49
SCARB1-204ENST00000535005 PLA2G2CQ5R387 149 aa12□□□□□ -0.49
SCARB1-204ENST00000535005 FAM83HQ6ZRV2 1179 aaPredicted RBP12□□□□□ -0.49
SCARB1-204ENST00000535005 CLEC14AQ86T13 490 aa12□□□□□ -0.49
SCARB1-204ENST00000535005 SLC22A15Q8IZD6 547 aa12□□□□□ -0.49
SCARB1-204ENST00000535005 SDR16C5Q8N3Y7 309 aa12□□□□□ -0.49
SCARB1-204ENST00000535005 CATSPER1Q8NEC5 780 aa12□□□□□ -0.49
SCARB1-204ENST00000535005 TMEM159Q96B96 161 aa12□□□□□ -0.49
SCARB1-204ENST00000535005 THTPAQ9BU02 230 aa12□□□□□ -0.49
SCARB1-204ENST00000535005 SLC13A1Q9BZW2 595 aa12□□□□□ -0.49
SCARB1-204ENST00000535005 TMEM168Q9H0V1 697 aa12□□□□□ -0.49
SCARB1-204ENST00000535005 TCEAL2Q9H3H9 227 aaPredicted RBP12□□□□□ -0.49
SCARB1-204ENST00000535005 DNAJC28Q9NX36 388 aa12□□□□□ -0.49
SCARB1-204ENST00000535005 PLEKHM1Q9Y4G2 1056 aa12□□□□□ -0.49
SCARB1-204ENST00000535005 ST14Q9Y5Y6 855 aa12□□□□□ -0.49
SCARB1-204ENST00000535005 SEC23IPQ9Y6Y8 1000 aaKnown RBP12□□□□□ -0.49
SCARB1-204ENST00000535005 LRP4O75096 1905 aa12□□□□□ -0.49
SCARB1-204ENST00000535005 MUC6Q6W4X9 2439 aa12□□□□□ -0.49
SCARB1-204ENST00000535005 H3BM21 787 aa12□□□□□ -0.49
SCARB1-204ENST00000535005 BAG2O95816 211 aa12□□□□□ -0.49
SCARB1-204ENST00000535005 MPC1LP0DKB6 136 aa12□□□□□ -0.49
SCARB1-204ENST00000535005 PBLDP30039 288 aaPredicted RBP12□□□□□ -0.49
SCARB1-204ENST00000535005 CPOXP36551 454 aa12□□□□□ -0.49
SCARB1-204ENST00000535005 MPLP40238 635 aa12□□□□□ -0.49
SCARB1-204ENST00000535005 NBL1P41271 181 aa12□□□□□ -0.49
SCARB1-204ENST00000535005 RPL5P46777 297 aaKnown RBP12□□□□□ -0.49
SCARB1-204ENST00000535005 HSPA14Q0VDF9 509 aa12□□□□□ -0.49
SCARB1-204ENST00000535005 ILF3Q12906 894 aaKnown RBP eCLIP12□□□□□ -0.494e-7■■■■■ 41.2
SCARB1-204ENST00000535005 BOP1Q14137 746 aaKnown RBP12□□□□□ -0.49
SCARB1-204ENST00000535005 PLA2G4EQ3MJ16 856 aa12□□□□□ -0.49
SCARB1-204ENST00000535005 SYTL3Q4VX76 610 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms