RNA–Protein interactions for RNA: ENST00000534591.1

VPS51-216, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 5

Gene VPS51, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-216ENST00000534591 TRPS1Q9UHF7 1281 aa16.63■□□□□ 0.25
VPS51-216ENST00000534591 NUMA1Q14980 2115 aa16.62■□□□□ 0.25
VPS51-216ENST00000534591 H0YHG0 523 aa16.62■□□□□ 0.25
VPS51-216ENST00000534591 CACNB4O00305 520 aaPredicted RBP16.62■□□□□ 0.25
VPS51-216ENST00000534591 UBDO15205 165 aa16.62■□□□□ 0.25
VPS51-216ENST00000534591 SLC31A1O15431 190 aa16.62■□□□□ 0.25
VPS51-216ENST00000534591 C1orf105O95561 183 aa16.62■□□□□ 0.25
VPS51-216ENST00000534591 HGFP14210 728 aa16.62■□□□□ 0.25
VPS51-216ENST00000534591 NQO1P15559 274 aaKnown RBP16.62■□□□□ 0.25
VPS51-216ENST00000534591 ACADLP28330 430 aa16.62■□□□□ 0.25
VPS51-216ENST00000534591 MAT2AP31153 395 aaKnown RBP16.62■□□□□ 0.25
VPS51-216ENST00000534591 ARL1P40616 181 aaPredicted RBP16.62■□□□□ 0.25
VPS51-216ENST00000534591 MAGEA9P43362 315 aa16.62■□□□□ 0.25
VPS51-216ENST00000534591 RPS9P46781 194 aaKnown RBP16.62■□□□□ 0.25
VPS51-216ENST00000534591 ATP4BP51164 291 aa16.62■□□□□ 0.25
VPS51-216ENST00000534591 NFE2L1Q14494 772 aa16.62■□□□□ 0.25
VPS51-216ENST00000534591 NAA25Q14CX7 972 aa16.62■□□□□ 0.25
VPS51-216ENST00000534591 PTCHD3Q3KNS1 767 aa16.62■□□□□ 0.25
VPS51-216ENST00000534591 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.62■□□□□ 0.25
VPS51-216ENST00000534591 TSSK4Q6SA08 328 aa16.62■□□□□ 0.25
VPS51-216ENST00000534591 RNF165Q6ZSG1 346 aa16.62■□□□□ 0.25
VPS51-216ENST00000534591 CDYL2Q8N8U2 506 aa16.62■□□□□ 0.25
VPS51-216ENST00000534591 METTL6Q8TCB7 284 aa16.62■□□□□ 0.25
VPS51-216ENST00000534591 MAGEC3Q8TD91 643 aa16.62■□□□□ 0.25
VPS51-216ENST00000534591 MAGEB10Q96LZ2 347 aaPredicted RBP16.62■□□□□ 0.25
VPS51-216ENST00000534591 C3orf30Q96M34 536 aa16.62■□□□□ 0.25
VPS51-216ENST00000534591 CATSPER2Q96P56 530 aa16.62■□□□□ 0.25
VPS51-216ENST00000534591 RAB3IPQ96QF0 476 aaPredicted RBP16.62■□□□□ 0.25
VPS51-216ENST00000534591 SLC29A3Q9BZD2 475 aa16.62■□□□□ 0.25
VPS51-216ENST00000534591 CHRDQ9H2X0 955 aa16.62■□□□□ 0.25
VPS51-216ENST00000534591 DNAJC11Q9NVH1 559 aa16.62■□□□□ 0.25
VPS51-216ENST00000534591 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.62■□□□□ 0.25
VPS51-216ENST00000534591 SLC17A4Q9Y2C5 497 aa16.62■□□□□ 0.25
VPS51-216ENST00000534591 TIMM22Q9Y584 194 aa16.62■□□□□ 0.25
VPS51-216ENST00000534591 DOCK9Q9BZ29 2069 aa16.61■□□□□ 0.25
VPS51-216ENST00000534591 ZFC3H1O60293 1989 aaKnown RBP16.61■□□□□ 0.25
VPS51-216ENST00000534591 WDR47O94967 919 aa16.61■□□□□ 0.25
VPS51-216ENST00000534591 ACSL1P33121 698 aa16.61■□□□□ 0.25
VPS51-216ENST00000534591 KIAA1024LP59773 190 aa16.61■□□□□ 0.25
VPS51-216ENST00000534591 DMPKQ09013 629 aa16.61■□□□□ 0.25
VPS51-216ENST00000534591 SQLEQ14534 574 aa16.61■□□□□ 0.25
VPS51-216ENST00000534591 HERC3Q15034 1050 aa16.61■□□□□ 0.25
VPS51-216ENST00000534591 XKR7Q5GH72 579 aa16.61■□□□□ 0.25
VPS51-216ENST00000534591 METRNLQ641Q3 311 aa16.61■□□□□ 0.25
VPS51-216ENST00000534591 TMEM198Q66K66 360 aa16.61■□□□□ 0.25
VPS51-216ENST00000534591 PDZD3Q86UT5 571 aa16.61■□□□□ 0.25
VPS51-216ENST00000534591 SNX31Q8N9S9 440 aa16.61■□□□□ 0.25
VPS51-216ENST00000534591 TIMM29Q9BSF4 260 aa16.61■□□□□ 0.25
VPS51-216ENST00000534591 BTBD10Q9BSF8 475 aa16.61■□□□□ 0.25
VPS51-216ENST00000534591 OR52A5Q9H2C5 316 aa16.61■□□□□ 0.25
VPS51-216ENST00000534591 AKTIPQ9H8T0 292 aa16.61■□□□□ 0.25
VPS51-216ENST00000534591 RIC8BQ9NVN3 520 aa16.61■□□□□ 0.25
VPS51-216ENST00000534591 ZNHIT2Q9UHR6 403 aa16.61■□□□□ 0.25
VPS51-216ENST00000534591 ACSL5Q9ULC5 683 aa16.61■□□□□ 0.25
VPS51-216ENST00000534591 FPGTO14772 594 aa16.6■□□□□ 0.25
VPS51-216ENST00000534591 CAPN1P07384 714 aa16.6■□□□□ 0.25
VPS51-216ENST00000534591 LINC00032P0C843 101 aa16.6■□□□□ 0.25
VPS51-216ENST00000534591 SP9P0CG40 484 aa16.6■□□□□ 0.25
VPS51-216ENST00000534591 THRAP10827 490 aa16.6■□□□□ 0.25
VPS51-216ENST00000534591 EZRP15311 586 aaKnown RBP16.6■□□□□ 0.25
VPS51-216ENST00000534591 LBPP18428 481 aa16.6■□□□□ 0.25
VPS51-216ENST00000534591 PIK3R1P27986 724 aa16.6■□□□□ 0.25
VPS51-216ENST00000534591 HMOX2P30519 316 aa16.6■□□□□ 0.25
VPS51-216ENST00000534591 BDKRB1P46663 353 aa16.6■□□□□ 0.25
VPS51-216ENST00000534591 PLA2G4EQ3MJ16 856 aa16.6■□□□□ 0.25
VPS51-216ENST00000534591 OGFOD2Q6N063 350 aa16.6■□□□□ 0.25
VPS51-216ENST00000534591 FAM83HQ6ZRV2 1179 aaPredicted RBP16.6■□□□□ 0.25
VPS51-216ENST00000534591 PGBD3Q8N328 593 aa16.6■□□□□ 0.25
VPS51-216ENST00000534591 TUBGCP3Q96CW5 907 aa16.6■□□□□ 0.25
VPS51-216ENST00000534591 SCARF2Q96GP6 870 aaPredicted RBP16.6■□□□□ 0.25
VPS51-216ENST00000534591 CDK15Q96Q40 435 aa16.6■□□□□ 0.25
VPS51-216ENST00000534591 PKP4Q99569 1192 aa16.6■□□□□ 0.25
VPS51-216ENST00000534591 STOX2Q9P2F5 926 aaPredicted RBP16.6■□□□□ 0.25
VPS51-216ENST00000534591 SLC23A2Q9UGH3 650 aa16.6■□□□□ 0.25
VPS51-216ENST00000534591 EBF1Q9UH73 591 aa16.6■□□□□ 0.25
VPS51-216ENST00000534591 G3BP2Q9UN86 482 aaKnown RBP16.6■□□□□ 0.25
VPS51-216ENST00000534591 BTRCQ9Y297 605 aa16.6■□□□□ 0.25
VPS51-216ENST00000534591 PRKAB1Q9Y478 270 aa16.6■□□□□ 0.25
VPS51-216ENST00000534591 PCYT1BQ9Y5K3 369 aaPredicted RBP16.6■□□□□ 0.25
VPS51-216ENST00000534591 COPG1Q9Y678 874 aaKnown RBP16.6■□□□□ 0.25
VPS51-216ENST00000534591 R4GN57 208 aa16.6■□□□□ 0.25
VPS51-216ENST00000534591 B2RBV5 119 aa16.6■□□□□ 0.25
VPS51-216ENST00000534591 C10orf142B7Z368 130 aa16.6■□□□□ 0.25
VPS51-216ENST00000534591 GYG2O15488 501 aa16.6■□□□□ 0.25
VPS51-216ENST00000534591 LATO43561 262 aa16.6■□□□□ 0.25
VPS51-216ENST00000534591 CLDN9O95484 217 aa16.6■□□□□ 0.25
VPS51-216ENST00000534591 SEMA4FO95754 770 aa16.6■□□□□ 0.25
VPS51-216ENST00000534591 RPN2P04844 631 aa16.6■□□□□ 0.25
VPS51-216ENST00000534591 CEACAM5P06731 702 aa16.6■□□□□ 0.25
VPS51-216ENST00000534591 COX4I1P13073 169 aa16.6■□□□□ 0.25
VPS51-216ENST00000534591 HNRNPA2B1P22626 353 aaKnown RBP16.6■□□□□ 0.25
VPS51-216ENST00000534591 KELP23276 732 aa16.6■□□□□ 0.25
VPS51-216ENST00000534591 OXTRP30559 389 aa16.6■□□□□ 0.25
VPS51-216ENST00000534591 CCR5P51681 352 aa16.6■□□□□ 0.25
VPS51-216ENST00000534591 PFN3P60673 137 aa16.6■□□□□ 0.25
VPS51-216ENST00000534591 KCNJ2P63252 427 aa16.6■□□□□ 0.25
VPS51-216ENST00000534591 ZXDCQ2QGD7 858 aaPredicted RBP16.6■□□□□ 0.25
VPS51-216ENST00000534591 GGTA1PQ4G0N0 100 aa16.6■□□□□ 0.25
VPS51-216ENST00000534591 AGTRAPQ6RW13 159 aa16.6■□□□□ 0.25
VPS51-216ENST00000534591 SPATA19Q7Z5L4 167 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms