RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	KAT7	O95251	611 aa		15.42	■□□□□ 0.06
NCAPD3-213	ENST00000534532	PTX3	P26022	381 aa	Predicted RBP	15.42	■□□□□ 0.06
NCAPD3-213	ENST00000534532	CAPG	P40121	348 aa		15.42	■□□□□ 0.06
NCAPD3-213	ENST00000534532	ADGRG6	Q86SQ4	1221 aa		15.42	■□□□□ 0.06
NCAPD3-213	ENST00000534532	ZDHHC12	Q96GR4	267 aa		15.42	■□□□□ 0.06
NCAPD3-213	ENST00000534532	NPY6R	Q99463	290 aa		15.42	■□□□□ 0.06
NCAPD3-213	ENST00000534532	TRIM8	Q9BZR9	551 aa		15.42	■□□□□ 0.06
NCAPD3-213	ENST00000534532	RNPEPL1	Q9HAU8	725 aa		15.42	■□□□□ 0.06
NCAPD3-213	ENST00000534532	VPS29	Q9UBQ0	182 aa		15.42	■□□□□ 0.06
NCAPD3-213	ENST00000534532	B4GALT6	Q9UBX8	382 aa		15.42	■□□□□ 0.06
NCAPD3-213	ENST00000534532	CA14	Q9ULX7	337 aa		15.42	■□□□□ 0.06
NCAPD3-213	ENST00000534532	TMEM98	Q9Y2Y6	226 aa		15.42	■□□□□ 0.06
NCAPD3-213	ENST00000534532	STX16-NPEPL1	H3BU86	382 aa		15.42	■□□□□ 0.06
NCAPD3-213	ENST00000534532		M0R2N6	131 aa		15.42	■□□□□ 0.06
NCAPD3-213	ENST00000534532	STX16	O14662	325 aa		15.42	■□□□□ 0.06
NCAPD3-213	ENST00000534532	CHST10	O43529	356 aa		15.42	■□□□□ 0.06
NCAPD3-213	ENST00000534532	TSPAN6	O43657	245 aa		15.42	■□□□□ 0.06
NCAPD3-213	ENST00000534532	ZNF805	Q5CZA5	627 aa		15.42	■□□□□ 0.06
NCAPD3-213	ENST00000534532	KLHL17	Q6TDP4	642 aa		15.42	■□□□□ 0.06
NCAPD3-213	ENST00000534532	DCUN1D3	Q8IWE4	304 aa		15.42	■□□□□ 0.06
NCAPD3-213	ENST00000534532	RASGEF1A	Q8N9B8	481 aa		15.42	■□□□□ 0.06
NCAPD3-213	ENST00000534532	SNX33	Q8WV41	574 aa		15.42	■□□□□ 0.06
NCAPD3-213	ENST00000534532	CLCC1	Q96S66	551 aa		15.42	■□□□□ 0.06
NCAPD3-213	ENST00000534532	OSBPL11	Q9BXB4	747 aa		15.42	■□□□□ 0.06
NCAPD3-213	ENST00000534532	SSU72	Q9NP77	194 aa	Known RBP	15.42	■□□□□ 0.06
NCAPD3-213	ENST00000534532	C8orf4	Q9NR00	106 aa		15.42	■□□□□ 0.06
NCAPD3-213	ENST00000534532	ACSS2	Q9NR19	701 aa		15.42	■□□□□ 0.06
NCAPD3-213	ENST00000534532	GNE	Q9Y223	722 aa	Known RBP	15.42	■□□□□ 0.06
NCAPD3-213	ENST00000534532	KCNJ5	P48544	419 aa		15.41	■□□□□ 0.06
NCAPD3-213	ENST00000534532	RING1	Q06587	406 aa		15.41	■□□□□ 0.06
NCAPD3-213	ENST00000534532	MED22	Q15528	200 aa		15.41	■□□□□ 0.06
NCAPD3-213	ENST00000534532	NIPAL1	Q6NVV3	410 aa		15.41	■□□□□ 0.06
NCAPD3-213	ENST00000534532	ANKRD46	Q86W74	232 aa		15.41	■□□□□ 0.06
NCAPD3-213	ENST00000534532	OR4K17	Q8NGC6	315 aa		15.41	■□□□□ 0.06
NCAPD3-213	ENST00000534532	FAR1	Q8WVX9	515 aa		15.41	■□□□□ 0.06
NCAPD3-213	ENST00000534532	PYCR2	Q96C36	320 aa		15.41	■□□□□ 0.06
NCAPD3-213	ENST00000534532	PCYT2	Q99447	389 aa		15.41	■□□□□ 0.06
NCAPD3-213	ENST00000534532	MKKS	Q9NPJ1	570 aa	Predicted RBP	15.41	■□□□□ 0.06
NCAPD3-213	ENST00000534532	MOCS1	Q9NZB8	636 aa		15.41	■□□□□ 0.06
NCAPD3-213	ENST00000534532	ACSL5	Q9ULC5	683 aa		15.41	■□□□□ 0.06
NCAPD3-213	ENST00000534532	STYXL1	Q9Y6J8	313 aa		15.41	■□□□□ 0.06
NCAPD3-213	ENST00000534532	LTN1	O94822	1766 aa		15.41	■□□□□ 0.06
NCAPD3-213	ENST00000534532	TPD52L2	O43399	206 aa	Known RBP	15.41	■□□□□ 0.06
NCAPD3-213	ENST00000534532	CYP4B1	P13584	511 aa		15.41	■□□□□ 0.06
NCAPD3-213	ENST00000534532	BTN3A2	P78410	334 aa		15.41	■□□□□ 0.06
NCAPD3-213	ENST00000534532	NFKB2	Q00653	900 aa		15.41	■□□□□ 0.06
NCAPD3-213	ENST00000534532	MYBPC3	Q14896	1274 aa		15.41	■□□□□ 0.06
NCAPD3-213	ENST00000534532	FAM214A	Q32MH5	1076 aa		15.41	■□□□□ 0.06
NCAPD3-213	ENST00000534532	KLHL6	Q8WZ60	621 aa		15.41	■□□□□ 0.06
NCAPD3-213	ENST00000534532	FCRL4	Q96PJ5	515 aa		15.41	■□□□□ 0.06
NCAPD3-213	ENST00000534532	SLC2A11	Q9BYW1	496 aa		15.41	■□□□□ 0.06
NCAPD3-213	ENST00000534532	UBE2QL1	A1L167	161 aa		15.41	■□□□□ 0.06
NCAPD3-213	ENST00000534532	TTC24	A2A3L6	582 aa	Predicted RBP	15.41	■□□□□ 0.06
NCAPD3-213	ENST00000534532	ELOA3D	A6NLF2	546 aa	Predicted RBP	15.41	■□□□□ 0.06
NCAPD3-213	ENST00000534532	OR5K4	A6NMS3	321 aa		15.41	■□□□□ 0.06
NCAPD3-213	ENST00000534532	SOCS5	O75159	536 aa		15.41	■□□□□ 0.06
NCAPD3-213	ENST00000534532	TIPRL	O75663	272 aa		15.41	■□□□□ 0.06
NCAPD3-213	ENST00000534532	MAPK10	P53779	464 aa		15.41	■□□□□ 0.06
NCAPD3-213	ENST00000534532	LIPE	Q05469	1076 aa		15.41	■□□□□ 0.06
NCAPD3-213	ENST00000534532	ELOA3B	Q3SY89	546 aa		15.41	■□□□□ 0.06
NCAPD3-213	ENST00000534532	AAGAB	Q6PD74	315 aa		15.41	■□□□□ 0.06
NCAPD3-213	ENST00000534532	SLC34A3	Q8N130	599 aa		15.41	■□□□□ 0.06
NCAPD3-213	ENST00000534532	ELOA3	Q8NG57	546 aa		15.41	■□□□□ 0.06
NCAPD3-213	ENST00000534532	OR2AJ1	Q8NGZ0	328 aa		15.41	■□□□□ 0.06
NCAPD3-213	ENST00000534532	FOXJ1	Q92949	421 aa		15.41	■□□□□ 0.06
NCAPD3-213	ENST00000534532	C1orf74	Q96LT6	269 aa		15.41	■□□□□ 0.06
NCAPD3-213	ENST00000534532	DMTF1	Q9Y222	760 aa		15.41	■□□□□ 0.06
NCAPD3-213	ENST00000534532	NPC1	O15118	1278 aa		15.41	■□□□□ 0.06
NCAPD3-213	ENST00000534532	SERPINA1	P01009	418 aa		15.41	■□□□□ 0.06
NCAPD3-213	ENST00000534532	TGFB1	P01137	390 aa		15.41	■□□□□ 0.06
NCAPD3-213	ENST00000534532	SRPRA	P08240	638 aa	Known RBP	15.41	■□□□□ 0.06
NCAPD3-213	ENST00000534532	DRD4	P21917	467 aa		15.41	■□□□□ 0.06
NCAPD3-213	ENST00000534532	PAFAH1B3	Q15102	231 aa	Known RBP	15.41	■□□□□ 0.06
NCAPD3-213	ENST00000534532	OR4C6	Q8NH72	309 aa		15.41	■□□□□ 0.06
NCAPD3-213	ENST00000534532	WDR92	Q96MX6	357 aa		15.41	■□□□□ 0.06
NCAPD3-213	ENST00000534532	OR2M4	Q96R27	311 aa		15.41	■□□□□ 0.06
NCAPD3-213	ENST00000534532	SIX4	Q9UIU6	781 aa		15.41	■□□□□ 0.06
NCAPD3-213	ENST00000534532	ZNF726	A6NNF4	738 aa		15.4	■□□□□ 0.06
NCAPD3-213	ENST00000534532	SAP18	O00422	153 aa	Known RBP	15.4	■□□□□ 0.06
NCAPD3-213	ENST00000534532	AP2A2	O94973	939 aa		15.4	■□□□□ 0.06
NCAPD3-213	ENST00000534532	EDNRB	P24530	442 aa		15.4	■□□□□ 0.06
NCAPD3-213	ENST00000534532	IL1R2	P27930	398 aa		15.4	■□□□□ 0.06
NCAPD3-213	ENST00000534532	MNDA	P41218	407 aa		15.4	■□□□□ 0.06
NCAPD3-213	ENST00000534532	SPIN4	Q56A73	249 aa		15.4	■□□□□ 0.06
NCAPD3-213	ENST00000534532	NAPRT	Q6XQN6	538 aa		15.4	■□□□□ 0.06
NCAPD3-213	ENST00000534532	TSEN15	Q8WW01	171 aa	Known RBP	15.4	■□□□□ 0.06
NCAPD3-213	ENST00000534532	GPR174	Q9BXC1	333 aa		15.4	■□□□□ 0.06
NCAPD3-213	ENST00000534532	RGS17	Q9UGC6	210 aa	Predicted RBP	15.4	■□□□□ 0.06
NCAPD3-213	ENST00000534532	AFDN	P55196	1824 aa	Known RBP	15.4	■□□□□ 0.06
NCAPD3-213	ENST00000534532		A8MUI8	341 aa		15.4	■□□□□ 0.06
NCAPD3-213	ENST00000534532	HTRA3	P83110	453 aa		15.4	■□□□□ 0.06
NCAPD3-213	ENST00000534532	LCN1P1	Q5VSP4	162 aa		15.4	■□□□□ 0.06
NCAPD3-213	ENST00000534532	IFT80	Q9P2H3	777 aa	Predicted RBP	15.4	■□□□□ 0.06
NCAPD3-213	ENST00000534532	RAPGEFL1	Q9UHV5	662 aa		15.4	■□□□□ 0.06
NCAPD3-213	ENST00000534532	C10orf71	Q711Q0	1435 aa		15.4	■□□□□ 0.06
NCAPD3-213	ENST00000534532	CDC7	O00311	574 aa		15.4	■□□□□ 0.06
NCAPD3-213	ENST00000534532	HCRT	O43612	131 aa		15.4	■□□□□ 0.06
NCAPD3-213	ENST00000534532	SYP	P08247	313 aa		15.4	■□□□□ 0.06
NCAPD3-213	ENST00000534532	TYRP1	P17643	537 aa		15.4	■□□□□ 0.06
NCAPD3-213	ENST00000534532	PRPS1L1	P21108	318 aa		15.4	■□□□□ 0.06

Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms