RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 VRK3Q8IV63 474 aa8.6□□□□□ -1.03
COPB1-211ENST00000534234 FLVCR1-AS1Q8TAF5 88 aa8.6□□□□□ -1.03
COPB1-211ENST00000534234 CHRNA10Q9GZZ6 450 aa8.6□□□□□ -1.03
COPB1-211ENST00000534234 MLXIPLQ9NP71 852 aa8.6□□□□□ -1.03
COPB1-211ENST00000534234 LZTFL1Q9NQ48 299 aa8.6□□□□□ -1.03
COPB1-211ENST00000534234 CATSPERZQ9NTU4 200 aa8.6□□□□□ -1.03
COPB1-211ENST00000534234 BFARQ9NZS9 450 aa8.6□□□□□ -1.03
COPB1-211ENST00000534234 MARCH4Q9P2E8 410 aaPredicted RBP8.6□□□□□ -1.03
COPB1-211ENST00000534234 CDYLQ9Y232 598 aa8.6□□□□□ -1.03
COPB1-211ENST00000534234 TTLL8A6PVC2 850 aa8.59□□□□□ -1.03
COPB1-211ENST00000534234 H3BMH7 237 aa8.59□□□□□ -1.03
COPB1-211ENST00000534234 PRMT5O14744 637 aaPredicted RBP8.59□□□□□ -1.03
COPB1-211ENST00000534234 ZNF185O15231 689 aa8.59□□□□□ -1.03
COPB1-211ENST00000534234 KLF7O75840 302 aaPredicted RBP8.59□□□□□ -1.03
COPB1-211ENST00000534234 SLCO2B1O94956 709 aa8.59□□□□□ -1.03
COPB1-211ENST00000534234 FGGP02679 453 aa8.59□□□□□ -1.03
COPB1-211ENST00000534234 RPN2P04844 631 aa8.59□□□□□ -1.03
COPB1-211ENST00000534234 CD9P21926 228 aa8.59□□□□□ -1.03
COPB1-211ENST00000534234 AOAHP28039 575 aa8.59□□□□□ -1.03
COPB1-211ENST00000534234 PEBP1P30086 187 aaKnown RBP8.59□□□□□ -1.03
COPB1-211ENST00000534234 KCNJ1P48048 391 aa8.59□□□□□ -1.03
COPB1-211ENST00000534234 TTPAP49638 278 aa8.59□□□□□ -1.03
COPB1-211ENST00000534234 RAB28P51157 221 aa8.59□□□□□ -1.03
COPB1-211ENST00000534234 CRADDP78560 199 aa8.59□□□□□ -1.03
COPB1-211ENST00000534234 BASP1P80723 227 aaKnown RBP8.59□□□□□ -1.03
COPB1-211ENST00000534234 DCDP81605 110 aaKnown RBP8.59□□□□□ -1.03
COPB1-211ENST00000534234 UBAP2LQ14157 1087 aaKnown RBP8.59□□□□□ -1.03
COPB1-211ENST00000534234 KYNUQ16719 465 aa8.59□□□□□ -1.03
COPB1-211ENST00000534234 SLC5A12Q1EHB4 618 aa8.59□□□□□ -1.03
COPB1-211ENST00000534234 C1orf189Q5VU69 101 aa8.59□□□□□ -1.03
COPB1-211ENST00000534234 PTRHD1Q6GMV3 140 aaKnown RBP8.59□□□□□ -1.03
COPB1-211ENST00000534234 RHBDD2Q6NTF9 364 aa8.59□□□□□ -1.03
COPB1-211ENST00000534234 TLDC1Q6P9B6 456 aa8.59□□□□□ -1.03
COPB1-211ENST00000534234 MED25Q71SY5 747 aa8.59□□□□□ -1.03
COPB1-211ENST00000534234 FAM20CQ8IXL6 584 aa8.59□□□□□ -1.03
COPB1-211ENST00000534234 KRT222Q8N1A0 295 aa8.59□□□□□ -1.03
COPB1-211ENST00000534234 DNAJC22Q8N4W6 341 aa8.59□□□□□ -1.03
COPB1-211ENST00000534234 C2orf73Q8N5S3 287 aaPredicted RBP8.59□□□□□ -1.03
COPB1-211ENST00000534234 ZBTB2Q8N680 514 aa8.59□□□□□ -1.03
COPB1-211ENST00000534234 ZNF655Q8N720 491 aaPredicted RBP8.59□□□□□ -1.03
COPB1-211ENST00000534234 TMEM102Q8N9M5 508 aaPredicted RBP8.59□□□□□ -1.03
COPB1-211ENST00000534234 LMNTD1Q8N9Z9 388 aa8.59□□□□□ -1.03
COPB1-211ENST00000534234 LKAAEAR1Q8TD35 194 aa8.59□□□□□ -1.03
COPB1-211ENST00000534234 MAIP1Q8WWC4 291 aa8.59□□□□□ -1.03
COPB1-211ENST00000534234 MIB2Q96AX9 1013 aa8.59□□□□□ -1.03
COPB1-211ENST00000534234 C17orf62Q9BQA9 187 aa8.59□□□□□ -1.03
COPB1-211ENST00000534234 DHRS4Q9BTZ2 278 aa8.59□□□□□ -1.03
COPB1-211ENST00000534234 IL22Q9GZX6 179 aa8.59□□□□□ -1.03
COPB1-211ENST00000534234 EIF2B3Q9NR50 452 aaKnown RBP8.59□□□□□ -1.03
COPB1-211ENST00000534234 IRAK4Q9NWZ3 460 aa8.59□□□□□ -1.03
COPB1-211ENST00000534234 CIDEBQ9UHD4 219 aa8.59□□□□□ -1.03
COPB1-211ENST00000534234 PLCL2Q9UPR0 1127 aa8.59□□□□□ -1.03
COPB1-211ENST00000534234 PADI2Q9Y2J8 665 aa8.59□□□□□ -1.03
COPB1-211ENST00000534234 ZKSCAN5Q9Y2L8 839 aa8.59□□□□□ -1.03
COPB1-211ENST00000534234 A6NL46 340 aa8.58□□□□□ -1.04
COPB1-211ENST00000534234 AP3B1O00203 1094 aa8.58□□□□□ -1.04
COPB1-211ENST00000534234 ZSCAN9O15535 394 aaPredicted RBP8.58□□□□□ -1.04
COPB1-211ENST00000534234 NDUFS3O75489 264 aa8.58□□□□□ -1.04
COPB1-211ENST00000534234 CEACAM4O75871 244 aa8.58□□□□□ -1.04
COPB1-211ENST00000534234 CTSBP07858 339 aa8.58□□□□□ -1.04
COPB1-211ENST00000534234 CCDC175P0C221 793 aa8.58□□□□□ -1.04
COPB1-211ENST00000534234 MAGP20916 626 aa8.58□□□□□ -1.04
COPB1-211ENST00000534234 NMBRP28336 390 aa8.58□□□□□ -1.04
COPB1-211ENST00000534234 PKLRP30613 574 aa8.58□□□□□ -1.04
COPB1-211ENST00000534234 RRADP55042 308 aa8.58□□□□□ -1.04
COPB1-211ENST00000534234 GRB7Q14451 532 aa8.58□□□□□ -1.04
COPB1-211ENST00000534234 SSPNQ14714 243 aa8.58□□□□□ -1.04
COPB1-211ENST00000534234 PAPD7Q5XG87 772 aaKnown RBP8.58□□□□□ -1.04
COPB1-211ENST00000534234 TTC23LQ6PF05 361 aa8.58□□□□□ -1.04
COPB1-211ENST00000534234 UNC5DQ6UXZ4 953 aa8.58□□□□□ -1.04
COPB1-211ENST00000534234 ATCAYQ86WG3 371 aa8.58□□□□□ -1.04
COPB1-211ENST00000534234 RAB43Q86YS6 212 aa8.58□□□□□ -1.04
COPB1-211ENST00000534234 LINC01555Q8NAE3 123 aa8.58□□□□□ -1.04
COPB1-211ENST00000534234 GSDMBQ8TAX9 411 aa8.58□□□□□ -1.04
COPB1-211ENST00000534234 SLC22A18Q96BI1 424 aa8.58□□□□□ -1.04
COPB1-211ENST00000534234 GBP5Q96PP8 586 aa8.58□□□□□ -1.04
COPB1-211ENST00000534234 PANX3Q96QZ0 392 aa8.58□□□□□ -1.04
COPB1-211ENST00000534234 MENTQ9BUN1 341 aa8.58□□□□□ -1.04
COPB1-211ENST00000534234 P2RY12Q9H244 342 aa8.58□□□□□ -1.04
COPB1-211ENST00000534234 TREX1Q9NSU2 369 aa8.58□□□□□ -1.04
COPB1-211ENST00000534234 TXLNGQ9NUQ3 528 aa8.58□□□□□ -1.04
COPB1-211ENST00000534234 EURLQ9NYK6 297 aa8.58□□□□□ -1.04
COPB1-211ENST00000534234 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.58□□□□□ -1.04
COPB1-211ENST00000534234 IFT80Q9P2H3 777 aaPredicted RBP8.58□□□□□ -1.04
COPB1-211ENST00000534234 DHCR7Q9UBM7 475 aaKnown RBP8.58□□□□□ -1.04
COPB1-211ENST00000534234 GPN3Q9UHW5 284 aaPredicted RBP8.58□□□□□ -1.04
COPB1-211ENST00000534234 SLC39A10Q9ULF5 831 aa8.58□□□□□ -1.04
COPB1-211ENST00000534234 G3BP2Q9UN86 482 aaKnown RBP8.58□□□□□ -1.04
COPB1-211ENST00000534234 SRPK3Q9UPE1 567 aa8.58□□□□□ -1.04
COPB1-211ENST00000534234 KLHL20Q9Y2M5 609 aa8.58□□□□□ -1.04
COPB1-211ENST00000534234 PCDHGB7Q9Y5F8 929 aa8.58□□□□□ -1.04
COPB1-211ENST00000534234 UBR5O95071 2799 aaPredicted RBP8.58□□□□□ -1.04
COPB1-211ENST00000534234 CYSRT1A8MQ03 144 aa8.57□□□□□ -1.04
COPB1-211ENST00000534234 KPNA5O15131 536 aa8.57□□□□□ -1.04
COPB1-211ENST00000534234 CEP104O60308 925 aa8.57□□□□□ -1.04
COPB1-211ENST00000534234 VAPBO95292 243 aa8.57□□□□□ -1.04
COPB1-211ENST00000534234 S1PR4O95977 384 aa8.57□□□□□ -1.04
COPB1-211ENST00000534234 CD63P08962 238 aa8.57□□□□□ -1.04
COPB1-211ENST00000534234 ALAS2P22557 587 aa8.57□□□□□ -1.04
COPB1-211ENST00000534234 OTX2P32243 289 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms