RNA–Protein interactions for RNA: ENST00000534149.5

CTSB-230, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-230ENST00000534149 RANBP10Q6VN20 620 aa14.37□□□□□ -0.11
CTSB-230ENST00000534149 FAM20CQ8IXL6 584 aa14.37□□□□□ -0.11
CTSB-230ENST00000534149 PARP9Q8IXQ6 854 aa14.37□□□□□ -0.11
CTSB-230ENST00000534149 DNAJC22Q8N4W6 341 aa14.37□□□□□ -0.11
CTSB-230ENST00000534149 CLDN19Q8N6F1 224 aa14.37□□□□□ -0.11
CTSB-230ENST00000534149 COG1Q8WTW3 980 aa14.37□□□□□ -0.11
CTSB-230ENST00000534149 SPTLC3Q9NUV7 552 aa14.37□□□□□ -0.11
CTSB-230ENST00000534149 IFNKQ9P0W0 207 aa14.37□□□□□ -0.11
CTSB-230ENST00000534149 PLAGL1Q9UM63 463 aa14.37□□□□□ -0.11
CTSB-230ENST00000534149 PLCL2Q9UPR0 1127 aa14.37□□□□□ -0.11
CTSB-230ENST00000534149 ASF1AQ9Y294 204 aa14.37□□□□□ -0.11
CTSB-230ENST00000534149 TDRKHQ9Y2W6 561 aaKnown RBP14.37□□□□□ -0.11
CTSB-230ENST00000534149 PKDREJQ9NTG1 2253 aa14.37□□□□□ -0.11
CTSB-230ENST00000534149 HACD1B0YJ81 288 aa14.36□□□□□ -0.11
CTSB-230ENST00000534149 TPBGLP0DKB5 382 aa14.36□□□□□ -0.11
CTSB-230ENST00000534149 PSMB4P28070 264 aa14.36□□□□□ -0.11
CTSB-230ENST00000534149 PEBP1P30086 187 aaKnown RBP14.36□□□□□ -0.11
CTSB-230ENST00000534149 BRD3Q15059 726 aa14.36□□□□□ -0.11
CTSB-230ENST00000534149 TFDP3Q5H9I0 405 aa14.36□□□□□ -0.11
CTSB-230ENST00000534149 B3GNTL1Q67FW5 361 aaPredicted RBP14.36□□□□□ -0.11
CTSB-230ENST00000534149 CAVIN1Q6NZI2 390 aaKnown RBP14.36□□□□□ -0.11
CTSB-230ENST00000534149 FAM180AQ6UWF9 173 aa14.36□□□□□ -0.11
CTSB-230ENST00000534149 SHISA6Q6ZSJ9 500 aa14.36□□□□□ -0.11
CTSB-230ENST00000534149 TTLL10Q6ZVT0 673 aa14.36□□□□□ -0.11
CTSB-230ENST00000534149 SERPINA9Q86WD7 417 aa14.36□□□□□ -0.11
CTSB-230ENST00000534149 FKBP10Q96AY3 582 aa14.36□□□□□ -0.11
CTSB-230ENST00000534149 NACC2Q96BF6 587 aa14.36□□□□□ -0.11
CTSB-230ENST00000534149 DNAJC1Q96KC8 554 aaKnown RBP14.36□□□□□ -0.11
CTSB-230ENST00000534149 SLX1AQ9BQ83 275 aa14.36□□□□□ -0.11
CTSB-230ENST00000534149 EPS8L2Q9H6S3 715 aa14.36□□□□□ -0.11
CTSB-230ENST00000534149 EURLQ9NYK6 297 aa14.36□□□□□ -0.11
CTSB-230ENST00000534149 COPG2Q9UBF2 871 aa14.36□□□□□ -0.11
CTSB-230ENST00000534149 KLHL20Q9Y2M5 609 aa14.36□□□□□ -0.11
CTSB-230ENST00000534149 HS3ST3B1Q9Y662 390 aa14.36□□□□□ -0.11
CTSB-230ENST00000534149 TRBV5-4A0A0C4DH59 114 aa14.35□□□□□ -0.11
CTSB-230ENST00000534149 A0A1B0GUH1 482 aa14.35□□□□□ -0.11
CTSB-230ENST00000534149 A0A1B0GX78 115 aa14.35□□□□□ -0.11
CTSB-230ENST00000534149 ISM1B1AKI9 464 aa14.35□□□□□ -0.11
CTSB-230ENST00000534149 H7C0C1 242 aa14.35□□□□□ -0.11
CTSB-230ENST00000534149 PSTPIP1O43586 416 aa14.35□□□□□ -0.11
CTSB-230ENST00000534149 GCGRP47871 477 aa14.35□□□□□ -0.11
CTSB-230ENST00000534149 ATP5OP48047 213 aa14.35□□□□□ -0.11
CTSB-230ENST00000534149 TLR1Q15399 786 aa14.35□□□□□ -0.11
CTSB-230ENST00000534149 NKG7Q16617 165 aa14.35□□□□□ -0.11
CTSB-230ENST00000534149 SLC5A12Q1EHB4 618 aa14.35□□□□□ -0.11
CTSB-230ENST00000534149 TUBB8Q3ZCM7 444 aa14.35□□□□□ -0.11
CTSB-230ENST00000534149 GPR33Q49SQ1 333 aa14.35□□□□□ -0.11
CTSB-230ENST00000534149 ITPRIPL1Q6GPH6 555 aa14.35□□□□□ -0.11
CTSB-230ENST00000534149 KIRREL2Q6UWL6 708 aa14.35□□□□□ -0.11
CTSB-230ENST00000534149 LINC00696Q6ZRV3 163 aa14.35□□□□□ -0.11
CTSB-230ENST00000534149 COX15Q7KZN9 410 aa14.35□□□□□ -0.11
CTSB-230ENST00000534149 TAS2R42Q7RTR8 314 aa14.35□□□□□ -0.11
CTSB-230ENST00000534149 OVCH1Q7RTY7 1134 aa14.35□□□□□ -0.11
CTSB-230ENST00000534149 CCDC50Q8IVM0 306 aa14.35□□□□□ -0.11
CTSB-230ENST00000534149 CATSPER1Q8NEC5 780 aa14.35□□□□□ -0.11
CTSB-230ENST00000534149 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.35□□□□□ -0.11
CTSB-230ENST00000534149 DLG3Q92796 817 aa14.35□□□□□ -0.11
CTSB-230ENST00000534149 SPSB2Q99619 263 aa14.35□□□□□ -0.11
CTSB-230ENST00000534149 ANP32EQ9BTT0 268 aa14.35□□□□□ -0.11
CTSB-230ENST00000534149 LHPPQ9H008 270 aa14.35□□□□□ -0.11
CTSB-230ENST00000534149 GOLPH3Q9H4A6 298 aa14.35□□□□□ -0.11
CTSB-230ENST00000534149 SOX17Q9H6I2 414 aaPredicted RBP14.35□□□□□ -0.11
CTSB-230ENST00000534149 OLAHQ9NV23 265 aa14.35□□□□□ -0.11
CTSB-230ENST00000534149 OR6C2Q9NZP2 312 aa14.35□□□□□ -0.11
CTSB-230ENST00000534149 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.35□□□□□ -0.11
CTSB-230ENST00000534149 JRKO75564 520 aa14.34□□□□□ -0.11
CTSB-230ENST00000534149 MAGP20916 626 aa14.34□□□□□ -0.11
CTSB-230ENST00000534149 ACADLP28330 430 aa14.34□□□□□ -0.11
CTSB-230ENST00000534149 MARCKSL1P49006 195 aa14.34□□□□□ -0.11
CTSB-230ENST00000534149 KCNK10P57789 538 aa14.34□□□□□ -0.11
CTSB-230ENST00000534149 OTUD4Q01804 1114 aaKnown RBP14.34□□□□□ -0.11
CTSB-230ENST00000534149 Q0VFX4 171 aa14.34□□□□□ -0.11
CTSB-230ENST00000534149 SPARCL1Q14515 664 aa14.34□□□□□ -0.11
CTSB-230ENST00000534149 RBBP7Q16576 425 aa14.34□□□□□ -0.11
CTSB-230ENST00000534149 DBN1Q16643 649 aa14.34□□□□□ -0.11
CTSB-230ENST00000534149 DENND5AQ6IQ26 1287 aa14.34□□□□□ -0.11
CTSB-230ENST00000534149 NAPRTQ6XQN6 538 aa14.34□□□□□ -0.11
CTSB-230ENST00000534149 PIANPQ8IYJ0 282 aa14.34□□□□□ -0.11
CTSB-230ENST00000534149 TBC1D21Q8IYX1 336 aa14.34□□□□□ -0.11
CTSB-230ENST00000534149 BCORP1Q8N888 145 aa14.34□□□□□ -0.11
CTSB-230ENST00000534149 OR8K1Q8NGG5 319 aa14.34□□□□□ -0.11
CTSB-230ENST00000534149 OR5K2Q8NHB8 316 aa14.34□□□□□ -0.11
CTSB-230ENST00000534149 ELMO1Q92556 727 aa14.34□□□□□ -0.11
CTSB-230ENST00000534149 THOC3Q96J01 351 aaKnown RBP14.34□□□□□ -0.11
CTSB-230ENST00000534149 MAGEB10Q96LZ2 347 aaPredicted RBP14.34□□□□□ -0.11
CTSB-230ENST00000534149 DNAJC7Q99615 494 aa14.34□□□□□ -0.11
CTSB-230ENST00000534149 CHP1Q99653 195 aa14.34□□□□□ -0.11
CTSB-230ENST00000534149 TBL1YQ9BQ87 522 aa14.34□□□□□ -0.11
CTSB-230ENST00000534149 MESP1Q9BRJ9 268 aa14.34□□□□□ -0.11
CTSB-230ENST00000534149 HEMGNQ9BXL5 484 aa14.34□□□□□ -0.11
CTSB-230ENST00000534149 RUBCNLQ9H714 662 aa14.34□□□□□ -0.11
CTSB-230ENST00000534149 WDR54Q9H977 334 aa14.34□□□□□ -0.11
CTSB-230ENST00000534149 SMARCAL1Q9NZC9 954 aa14.34□□□□□ -0.11
CTSB-230ENST00000534149 CTSFQ9UBX1 484 aa14.34□□□□□ -0.11
CTSB-230ENST00000534149 POLG2Q9UHN1 485 aa14.34□□□□□ -0.11
CTSB-230ENST00000534149 AAR2Q9Y312 384 aaKnown RBP14.34□□□□□ -0.11
CTSB-230ENST00000534149 PRSS21Q9Y6M0 314 aa14.34□□□□□ -0.11
CTSB-230ENST00000534149 CCDC168Q8NDH2 2452 aa14.34□□□□□ -0.11
CTSB-230ENST00000534149 HEATR9A2RTY3 570 aa14.33□□□□□ -0.12
CTSB-230ENST00000534149 LIN7AO14910 233 aaPredicted RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms