RNA–Protein interactions for RNA: ENST00000533897.1

CTSC-208, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 4,344 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-208ENST00000533897 METTL23Q86XA0 190 aa4.32□□□□□ -1.72
CTSC-208ENST00000533897 GPSM1Q86YR5 675 aa4.32□□□□□ -1.72
CTSC-208ENST00000533897 C8orf59Q8N0T1 100 aaPredicted RBP4.32□□□□□ -1.72
CTSC-208ENST00000533897 ZNF513Q8N8E2 541 aaPredicted RBP4.32□□□□□ -1.72
CTSC-208ENST00000533897 CDYL2Q8N8U2 506 aa4.32□□□□□ -1.72
CTSC-208ENST00000533897 L3MBTL4Q8NA19 623 aa4.32□□□□□ -1.72
CTSC-208ENST00000533897 OR7D4Q8NG98 312 aa4.32□□□□□ -1.72
CTSC-208ENST00000533897 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.32□□□□□ -1.72
CTSC-208ENST00000533897 ITFG1Q8TB96 612 aa4.32□□□□□ -1.72
CTSC-208ENST00000533897 INPP5KQ9BT40 448 aa4.32□□□□□ -1.72
CTSC-208ENST00000533897 TBC1D23Q9NUY8 699 aa4.32□□□□□ -1.72
CTSC-208ENST00000533897 TMEM184CQ9NVA4 438 aa4.32□□□□□ -1.72
CTSC-208ENST00000533897 QPCTLQ9NXS2 382 aa4.32□□□□□ -1.72
CTSC-208ENST00000533897 PKD2L2Q9NZM6 624 aa4.32□□□□□ -1.72
CTSC-208ENST00000533897 KLHL42Q9P2K6 505 aa4.32□□□□□ -1.72
CTSC-208ENST00000533897 POLR3HQ9Y535 204 aaPredicted RBP4.32□□□□□ -1.72
CTSC-208ENST00000533897 ZFP37Q9Y6Q3 630 aaPredicted RBP4.32□□□□□ -1.72
CTSC-208ENST00000533897 A3GALT2U3KPV4 340 aa4.32□□□□□ -1.72
CTSC-208ENST00000533897 REV3LO60673 3130 aa4.31□□□□□ -1.72
CTSC-208ENST00000533897 LAMA2P24043 3122 aaKnown RBP4.31□□□□□ -1.72
CTSC-208ENST00000533897 ZNF99A8MXY4 864 aaPredicted RBP4.31□□□□□ -1.72
CTSC-208ENST00000533897 SLC22A1O15245 554 aa4.31□□□□□ -1.72
CTSC-208ENST00000533897 MITFO75030 526 aaPredicted RBP4.31□□□□□ -1.72
CTSC-208ENST00000533897 KATNA1O75449 491 aa4.31□□□□□ -1.72
CTSC-208ENST00000533897 SOAT2O75908 522 aa4.31□□□□□ -1.72
CTSC-208ENST00000533897 RHOBTB1O94844 696 aa4.31□□□□□ -1.72
CTSC-208ENST00000533897 OLFM2O95897 454 aa4.31□□□□□ -1.72
CTSC-208ENST00000533897 NTRK1P04629 796 aa4.31□□□□□ -1.72
CTSC-208ENST00000533897 SERPINF2P08697 491 aa4.31□□□□□ -1.72
CTSC-208ENST00000533897 EBLN1P0CF75 366 aa4.31□□□□□ -1.72
CTSC-208ENST00000533897 PTPN2P17706 415 aa4.31□□□□□ -1.72
CTSC-208ENST00000533897 LPOP22079 712 aaPredicted RBP4.31□□□□□ -1.72
CTSC-208ENST00000533897 OR1E1P30953 314 aa4.31□□□□□ -1.72
CTSC-208ENST00000533897 MC4RP32245 332 aa4.31□□□□□ -1.72
CTSC-208ENST00000533897 CCR3P51677 355 aa4.31□□□□□ -1.72
CTSC-208ENST00000533897 IL2P60568 153 aa4.31□□□□□ -1.72
CTSC-208ENST00000533897 KCNJ10P78508 379 aa4.31□□□□□ -1.72
CTSC-208ENST00000533897 EEF1A2Q05639 463 aaKnown RBP4.31□□□□□ -1.72
CTSC-208ENST00000533897 TRIM32Q13049 653 aa4.31□□□□□ -1.72
CTSC-208ENST00000533897 GPR17Q13304 367 aa4.31□□□□□ -1.72
CTSC-208ENST00000533897 MAD2L1BPQ15013 274 aaPredicted RBP4.31□□□□□ -1.72
CTSC-208ENST00000533897 ZIK1Q3SY52 487 aaPredicted RBP4.31□□□□□ -1.72
CTSC-208ENST00000533897 TOR1AIP1Q5JTV8 583 aa4.31□□□□□ -1.72
CTSC-208ENST00000533897 SPANXN4Q5MJ08 99 aa4.31□□□□□ -1.72
CTSC-208ENST00000533897 TTC23Q5W5X9 447 aa4.31□□□□□ -1.72
CTSC-208ENST00000533897 ZNF605Q86T29 641 aa4.31□□□□□ -1.72
CTSC-208ENST00000533897 SLC22A15Q8IZD6 547 aa4.31□□□□□ -1.72
CTSC-208ENST00000533897 BEND7Q8N7W2 519 aaPredicted RBP4.31□□□□□ -1.72
CTSC-208ENST00000533897 FNDC5Q8NAU1 212 aa4.31□□□□□ -1.72
CTSC-208ENST00000533897 OR2T12Q8NG77 320 aa4.31□□□□□ -1.72
CTSC-208ENST00000533897 CNIH3Q8TBE1 160 aa4.31□□□□□ -1.72
CTSC-208ENST00000533897 CHTF18Q8WVB6 975 aa4.31□□□□□ -1.72
CTSC-208ENST00000533897 OVCA2Q8WZ82 227 aa4.31□□□□□ -1.72
CTSC-208ENST00000533897 POP5Q969H6 163 aaKnown RBP4.31□□□□□ -1.72
CTSC-208ENST00000533897 RNF34Q969K3 372 aa4.31□□□□□ -1.72
CTSC-208ENST00000533897 PYURFQ96I23 114 aa4.31□□□□□ -1.72
CTSC-208ENST00000533897 CASD1Q96PB1 797 aa4.31□□□□□ -1.72
CTSC-208ENST00000533897 SEPHS2Q99611 448 aa4.31□□□□□ -1.72
CTSC-208ENST00000533897 BOCQ9BWV1 1114 aa4.31□□□□□ -1.72
CTSC-208ENST00000533897 KLF16Q9BXK1 252 aaPredicted RBP4.31□□□□□ -1.72
CTSC-208ENST00000533897 NSUN3Q9H649 340 aaKnown RBP4.31□□□□□ -1.72
CTSC-208ENST00000533897 GPATCH2Q9NW75 528 aa4.31□□□□□ -1.72
CTSC-208ENST00000533897 MARCH2Q9P0N8 246 aa4.31□□□□□ -1.72
CTSC-208ENST00000533897 OPTCQ9UBM4 332 aa4.31□□□□□ -1.72
CTSC-208ENST00000533897 PCDHGA3Q9Y5H0 932 aa4.31□□□□□ -1.72
CTSC-208ENST00000533897 USP34Q70CQ2 3546 aa4.31□□□□□ -1.72
CTSC-208ENST00000533897 NUP210LQ5VU65 1888 aa4.31□□□□□ -1.72
CTSC-208ENST00000533897 RNF103-CHMP3A0A140T963 221 aa4.31□□□□□ -1.72
CTSC-208ENST00000533897 MANBAO00462 879 aa4.31□□□□□ -1.72
CTSC-208ENST00000533897 ACSL4O60488 711 aa4.31□□□□□ -1.72
CTSC-208ENST00000533897 NDUFS2O75306 463 aa4.31□□□□□ -1.72
CTSC-208ENST00000533897 SEC24DO94855 1032 aaPredicted RBP4.31□□□□□ -1.72
CTSC-208ENST00000533897 KCNK2O95069 426 aa4.31□□□□□ -1.72
CTSC-208ENST00000533897 CNPP09543 421 aaKnown RBP4.31□□□□□ -1.72
CTSC-208ENST00000533897 OCM2P0CE71 109 aa4.31□□□□□ -1.72
CTSC-208ENST00000533897 OCMP0CE72 109 aaPredicted RBP4.31□□□□□ -1.72
CTSC-208ENST00000533897 BCKDHAP12694 445 aa4.31□□□□□ -1.72
CTSC-208ENST00000533897 AKR1A1P14550 325 aa4.31□□□□□ -1.72
CTSC-208ENST00000533897 CD22P20273 847 aa4.31□□□□□ -1.72
CTSC-208ENST00000533897 ACRV1P26436 265 aa4.31□□□□□ -1.72
CTSC-208ENST00000533897 BMPR1AP36894 532 aa4.31□□□□□ -1.72
CTSC-208ENST00000533897 TGFBR1P36897 503 aa4.31□□□□□ -1.72
CTSC-208ENST00000533897 SLC15A1P46059 708 aa4.31□□□□□ -1.72
CTSC-208ENST00000533897 CSNK1DP48730 415 aa4.31□□□□□ -1.72
CTSC-208ENST00000533897 RAE1P78406 368 aaKnown RBP4.31□□□□□ -1.72
CTSC-208ENST00000533897 TSPY1Q01534 308 aa4.31□□□□□ -1.72
CTSC-208ENST00000533897 CACNG1Q06432 222 aa4.31□□□□□ -1.72
CTSC-208ENST00000533897 EFEMP1Q12805 493 aa4.31□□□□□ -1.72
CTSC-208ENST00000533897 TAF10Q12962 218 aa4.31□□□□□ -1.72
CTSC-208ENST00000533897 TMED1Q13445 227 aa4.31□□□□□ -1.72
CTSC-208ENST00000533897 NR1D2Q14995 579 aa4.31□□□□□ -1.72
CTSC-208ENST00000533897 AP5B1Q2VPB7 878 aa4.31□□□□□ -1.72
CTSC-208ENST00000533897 FAM98BQ52LJ0 330 aaKnown RBP4.31□□□□□ -1.72
CTSC-208ENST00000533897 OR4F3Q6IEY1 312 aa4.31□□□□□ -1.72
CTSC-208ENST00000533897 TTC23LQ6PF05 361 aa4.31□□□□□ -1.72
CTSC-208ENST00000533897 GLT6D1Q7Z4J2 308 aa4.31□□□□□ -1.72
CTSC-208ENST00000533897 NLRP8Q86W28 1048 aa4.31□□□□□ -1.72
CTSC-208ENST00000533897 RGL4Q8IZJ4 473 aa4.31□□□□□ -1.72
CTSC-208ENST00000533897 ABI1Q8IZP0 508 aa4.31□□□□□ -1.72
CTSC-208ENST00000533897 THEM5Q8N1Q8 247 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms