RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 MRM3Q9HC36 420 aaKnown RBP8.47□□□□□ -1.05
COPB1-210ENST00000533533 MLXIPLQ9NP71 852 aa8.47□□□□□ -1.05
COPB1-210ENST00000533533 IMP3Q9NV31 184 aaKnown RBP8.47□□□□□ -1.05
COPB1-210ENST00000533533 IL1RAPL1Q9NZN1 696 aa8.47□□□□□ -1.05
COPB1-210ENST00000533533 SEMA5BQ9P283 1151 aa8.47□□□□□ -1.05
COPB1-210ENST00000533533 MARCH4Q9P2E8 410 aaPredicted RBP8.47□□□□□ -1.05
COPB1-210ENST00000533533 CDC23Q9UJX2 597 aa8.47□□□□□ -1.05
COPB1-210ENST00000533533 RARRES3Q9UL19 164 aa8.47□□□□□ -1.05
COPB1-210ENST00000533533 RIMKLBQ9ULI2 386 aa8.47□□□□□ -1.05
COPB1-210ENST00000533533 PCDHGA9Q9Y5G4 932 aaKnown RBP8.47□□□□□ -1.05
COPB1-210ENST00000533533 CFAP20Q9Y6A4 193 aaKnown RBP8.47□□□□□ -1.05
COPB1-210ENST00000533533 DNMT3AQ9Y6K1 912 aaPredicted RBP8.47□□□□□ -1.05
COPB1-210ENST00000533533 FER1L5A0AVI2 2057 aa8.47□□□□□ -1.05
COPB1-210ENST00000533533 IGHV5-51A0A0C4DH38 117 aa8.46□□□□□ -1.06
COPB1-210ENST00000533533 MAGEB16A2A368 324 aa8.46□□□□□ -1.06
COPB1-210ENST00000533533 C2orf72A6NCS6 295 aa8.46□□□□□ -1.06
COPB1-210ENST00000533533 FAM187AA6NFU0 413 aa8.46□□□□□ -1.06
COPB1-210ENST00000533533 PFDN6O15212 129 aa8.46□□□□□ -1.06
COPB1-210ENST00000533533 RAD51CO43502 376 aa8.46□□□□□ -1.06
COPB1-210ENST00000533533 FTH1P02794 183 aa8.46□□□□□ -1.06
COPB1-210ENST00000533533 SLC35G4P0C7Q5 338 aa8.46□□□□□ -1.06
COPB1-210ENST00000533533 FOLR1P15328 257 aa8.46□□□□□ -1.06
COPB1-210ENST00000533533 PTPN4P29074 926 aa8.46□□□□□ -1.06
COPB1-210ENST00000533533 TTPAP49638 278 aa8.46□□□□□ -1.06
COPB1-210ENST00000533533 PRLHRP49683 370 aa8.46□□□□□ -1.06
COPB1-210ENST00000533533 PGDP52209 483 aa8.46□□□□□ -1.06
COPB1-210ENST00000533533 ARL4CP56559 192 aa8.46□□□□□ -1.06
COPB1-210ENST00000533533 PPP1CAP62136 330 aa8.46□□□□□ -1.06
COPB1-210ENST00000533533 ACVR1Q04771 509 aa8.46□□□□□ -1.06
COPB1-210ENST00000533533 DHX9Q08211 1270 aaKnown RBP8.46□□□□□ -1.06
COPB1-210ENST00000533533 CALCOCO2Q13137 446 aa8.46□□□□□ -1.06
COPB1-210ENST00000533533 BOP1Q14137 746 aaKnown RBP8.46□□□□□ -1.06
COPB1-210ENST00000533533 SEMA3AQ14563 771 aa8.46□□□□□ -1.06
COPB1-210ENST00000533533 ITIH4Q14624 930 aa8.46□□□□□ -1.06
COPB1-210ENST00000533533 KCNAB1Q14722 419 aa8.46□□□□□ -1.06
COPB1-210ENST00000533533 MORF4L2Q15014 288 aa8.46□□□□□ -1.06
COPB1-210ENST00000533533 PLCL1Q15111 1095 aa8.46□□□□□ -1.06
COPB1-210ENST00000533533 UGT8Q16880 541 aa8.46□□□□□ -1.06
COPB1-210ENST00000533533 WHAMMP3Q1A5X7 153 aa8.46□□□□□ -1.06
COPB1-210ENST00000533533 NADK2Q4G0N4 442 aa8.46□□□□□ -1.06
COPB1-210ENST00000533533 ANKRD20A4Q4UJ75 823 aa8.46□□□□□ -1.06
COPB1-210ENST00000533533 BCL7AQ4VC05 210 aa8.46□□□□□ -1.06
COPB1-210ENST00000533533 CPZQ66K79 652 aa8.46□□□□□ -1.06
COPB1-210ENST00000533533 PTRHD1Q6GMV3 140 aaKnown RBP8.46□□□□□ -1.06
COPB1-210ENST00000533533 MRNIPQ6NTE8 343 aa8.46□□□□□ -1.06
COPB1-210ENST00000533533 FAM199XQ6PEV8 388 aaPredicted RBP8.46□□□□□ -1.06
COPB1-210ENST00000533533 NAPRTQ6XQN6 538 aa8.46□□□□□ -1.06
COPB1-210ENST00000533533 CERS6Q6ZMG9 384 aa8.46□□□□□ -1.06
COPB1-210ENST00000533533 C11orf96Q7Z7L8 435 aa8.46□□□□□ -1.06
COPB1-210ENST00000533533 SYVN1Q86TM6 617 aa8.46□□□□□ -1.06
COPB1-210ENST00000533533 HOOK3Q86VS8 718 aa8.46□□□□□ -1.06
COPB1-210ENST00000533533 BPHLQ86WA6 291 aaPredicted RBP8.46□□□□□ -1.06
COPB1-210ENST00000533533 PDIK1LQ8N165 341 aa8.46□□□□□ -1.06
COPB1-210ENST00000533533 LILRA3Q8N6C8 439 aaPredicted RBP8.46□□□□□ -1.06
COPB1-210ENST00000533533 SIDT2Q8NBJ9 832 aaKnown RBP8.46□□□□□ -1.06
COPB1-210ENST00000533533 OR2L2Q8NH16 312 aa8.46□□□□□ -1.06
COPB1-210ENST00000533533 KIF18AQ8NI77 898 aa8.46□□□□□ -1.06
COPB1-210ENST00000533533 HM13Q8TCT9 377 aa8.46□□□□□ -1.06
COPB1-210ENST00000533533 SSC4DQ8WTU2 575 aa8.46□□□□□ -1.06
COPB1-210ENST00000533533 ELMO1Q92556 727 aa8.46□□□□□ -1.06
COPB1-210ENST00000533533 UBXN4Q92575 508 aa8.46□□□□□ -1.06
COPB1-210ENST00000533533 CFAP36Q96G28 342 aa8.46□□□□□ -1.06
COPB1-210ENST00000533533 SLC41A2Q96JW4 573 aa8.46□□□□□ -1.06
COPB1-210ENST00000533533 C12orf66Q96MD2 445 aa8.46□□□□□ -1.06
COPB1-210ENST00000533533 PWWP2AQ96N64 755 aa8.46□□□□□ -1.06
COPB1-210ENST00000533533 RUFY1Q96T51 708 aa8.46□□□□□ -1.06
COPB1-210ENST00000533533 CCM2Q9BSQ5 444 aa8.46□□□□□ -1.06
COPB1-210ENST00000533533 WWP1Q9H0M0 922 aa8.46□□□□□ -1.06
COPB1-210ENST00000533533 PPANQ9NQ55 473 aaKnown RBP8.46□□□□□ -1.06
COPB1-210ENST00000533533 TREX1Q9NSU2 369 aa8.46□□□□□ -1.06
COPB1-210ENST00000533533 C20orf96Q9NUD7 363 aaPredicted RBP8.46□□□□□ -1.06
COPB1-210ENST00000533533 WDR37Q9Y2I8 494 aa8.46□□□□□ -1.06
COPB1-210ENST00000533533 UTP11Q9Y3A2 253 aaKnown RBP8.46□□□□□ -1.06
COPB1-210ENST00000533533 MAP4K5Q9Y4K4 846 aa8.46□□□□□ -1.06
COPB1-210ENST00000533533 PRSS21Q9Y6M0 314 aa8.46□□□□□ -1.06
COPB1-210ENST00000533533 DOCK10Q96BY6 2186 aa8.46□□□□□ -1.06
COPB1-210ENST00000533533 C2CD3Q4AC94 2353 aa8.46□□□□□ -1.06
COPB1-210ENST00000533533 ANKRD17O75179 2603 aaKnown RBP8.45□□□□□ -1.06
COPB1-210ENST00000533533 PCNX1Q96RV3 2341 aa8.45□□□□□ -1.06
COPB1-210ENST00000533533 IGLV3-16A0A075B6K0 115 aa8.45□□□□□ -1.06
COPB1-210ENST00000533533 FAM237BA0A1B0GVD1 139 aa8.45□□□□□ -1.06
COPB1-210ENST00000533533 QSOX1O00391 747 aa8.45□□□□□ -1.06
COPB1-210ENST00000533533 IFRD1O00458 451 aaPredicted RBP8.45□□□□□ -1.06
COPB1-210ENST00000533533 NDC80O14777 642 aa8.45□□□□□ -1.06
COPB1-210ENST00000533533 SGTAO43765 313 aa8.45□□□□□ -1.06
COPB1-210ENST00000533533 SEMA7AO75326 666 aa8.45□□□□□ -1.06
COPB1-210ENST00000533533 SORBS2O94875 1100 aaKnown RBP8.45□□□□□ -1.06
COPB1-210ENST00000533533 AP2A2O94973 939 aa8.45□□□□□ -1.06
COPB1-210ENST00000533533 SEC31AO94979 1220 aaKnown RBP8.45□□□□□ -1.06
COPB1-210ENST00000533533 TUBB4AP04350 444 aa8.45□□□□□ -1.06
COPB1-210ENST00000533533 RNF224P0DH78 156 aa8.45□□□□□ -1.06
COPB1-210ENST00000533533 PGAM1P18669 254 aa8.45□□□□□ -1.06
COPB1-210ENST00000533533 PSMA3P25788 255 aa8.45□□□□□ -1.06
COPB1-210ENST00000533533 FMO4P31512 558 aa8.45□□□□□ -1.06
COPB1-210ENST00000533533 RPL21P46778 160 aaKnown RBP8.45□□□□□ -1.06
COPB1-210ENST00000533533 PREPP48147 710 aa8.45□□□□□ -1.06
COPB1-210ENST00000533533 CCL11P51671 97 aa8.45□□□□□ -1.06
COPB1-210ENST00000533533 EIF3BP55884 814 aaKnown RBP8.45□□□□□ -1.06
COPB1-210ENST00000533533 RPS18P62269 152 aaKnown RBP8.45□□□□□ -1.06
COPB1-210ENST00000533533 RPS15P62841 145 aaKnown RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms