RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 FOLR1P15328 257 aa19.79■□□□□ 0.76
CCS-208ENST00000533244 CDH3P22223 829 aa19.79■□□□□ 0.76
CCS-208ENST00000533244 PEBP1P30086 187 aaKnown RBP19.79■□□□□ 0.76
CCS-208ENST00000533244 CCNFP41002 786 aa19.79■□□□□ 0.76
CCS-208ENST00000533244 TGIF1Q15583 401 aa19.79■□□□□ 0.76
CCS-208ENST00000533244 KLHL38Q2WGJ6 581 aa19.79■□□□□ 0.76
CCS-208ENST00000533244 C19orf48Q6RUI8 117 aa19.79■□□□□ 0.76
CCS-208ENST00000533244 SPESP1Q6UW49 350 aa19.79■□□□□ 0.76
CCS-208ENST00000533244 RASGRP3Q8IV61 690 aa19.79■□□□□ 0.76
CCS-208ENST00000533244 LINC01555Q8NAE3 123 aa19.79■□□□□ 0.76
CCS-208ENST00000533244 RAD51AP1Q96B01 352 aa19.79■□□□□ 0.76
CCS-208ENST00000533244 OR2A14Q96R47 310 aa19.79■□□□□ 0.76
CCS-208ENST00000533244 GPR21Q99679 349 aa19.79■□□□□ 0.76
CCS-208ENST00000533244 SPHK1Q9NYA1 384 aa19.79■□□□□ 0.76
CCS-208ENST00000533244 PILRAQ9UKJ1 303 aa19.79■□□□□ 0.76
CCS-208ENST00000533244 TMEM184BQ9Y519 407 aaPredicted RBP19.79■□□□□ 0.76
CCS-208ENST00000533244 EIF3FO00303 357 aaPredicted RBP19.78■□□□□ 0.76
CCS-208ENST00000533244 RASGRF2O14827 1237 aa19.78■□□□□ 0.76
CCS-208ENST00000533244 PSIP1O75475 530 aaKnown RBP19.78■□□□□ 0.76
CCS-208ENST00000533244 EBLN1P0CF75 366 aa19.78■□□□□ 0.76
CCS-208ENST00000533244 ENO3P13929 434 aaPredicted RBP19.78■□□□□ 0.76
CCS-208ENST00000533244 ST6GAL1P15907 406 aa19.78■□□□□ 0.76
CCS-208ENST00000533244 UGT2B7P16662 529 aa19.78■□□□□ 0.76
CCS-208ENST00000533244 CD9P21926 228 aa19.78■□□□□ 0.76
CCS-208ENST00000533244 BDKRB1P46663 353 aa19.78■□□□□ 0.76
CCS-208ENST00000533244 PLTPP55058 493 aa19.78■□□□□ 0.76
CCS-208ENST00000533244 ACY1Q03154 408 aa19.78■□□□□ 0.76
CCS-208ENST00000533244 FOXM1Q08050 763 aa19.78■□□□□ 0.76
CCS-208ENST00000533244 MGAT5Q09328 741 aa19.78■□□□□ 0.76
CCS-208ENST00000533244 KCNAB1Q14722 419 aa19.78■□□□□ 0.76
CCS-208ENST00000533244 CCSMST1Q4G0I0 132 aa19.78■□□□□ 0.76
CCS-208ENST00000533244 RBM20Q5T481 1227 aaKnown RBP19.78■□□□□ 0.76
CCS-208ENST00000533244 CYB5D1Q6P9G0 228 aa19.78■□□□□ 0.76
CCS-208ENST00000533244 SPNS2Q8IVW8 549 aa19.78■□□□□ 0.76
CCS-208ENST00000533244 OR2L8Q8NGY9 312 aa19.78■□□□□ 0.76
CCS-208ENST00000533244 KIF18AQ8NI77 898 aa19.78■□□□□ 0.76
CCS-208ENST00000533244 SKA2Q8WVK7 121 aaPredicted RBP19.78■□□□□ 0.76
CCS-208ENST00000533244 INPP5DQ92835 1189 aa19.78■□□□□ 0.76
CCS-208ENST00000533244 FOPNLQ96NB1 174 aa19.78■□□□□ 0.76
CCS-208ENST00000533244 TRAPPC9Q96Q05 1148 aa19.78■□□□□ 0.76
CCS-208ENST00000533244 NDNQ99608 321 aa19.78■□□□□ 0.76
CCS-208ENST00000533244 SAYSD1Q9NPB0 183 aa19.78■□□□□ 0.76
CCS-208ENST00000533244 PPANQ9NQ55 473 aaKnown RBP19.78■□□□□ 0.76
CCS-208ENST00000533244 CORO1CQ9ULV4 474 aaPredicted RBP19.78■□□□□ 0.76
CCS-208ENST00000533244 SLC9B1P1A6NJY1 282 aa19.77■□□□□ 0.76
CCS-208ENST00000533244 VPS26AO75436 327 aa19.77■□□□□ 0.76
CCS-208ENST00000533244 DLGAP3O95886 979 aa19.77■□□□□ 0.76
CCS-208ENST00000533244 MSL3P1P0C860 447 aa19.77■□□□□ 0.76
CCS-208ENST00000533244 MPC1LP0DKB6 136 aa19.77■□□□□ 0.76
CCS-208ENST00000533244 CBSLP0DN79 551 aa19.77■□□□□ 0.76
CCS-208ENST00000533244 CBSP35520 551 aa19.77■□□□□ 0.76
CCS-208ENST00000533244 UCNP55089 124 aa19.77■□□□□ 0.76
CCS-208ENST00000533244 SLC7A5Q01650 507 aa19.77■□□□□ 0.76
CCS-208ENST00000533244 TUBB3Q13509 450 aa19.77■□□□□ 0.76
CCS-208ENST00000533244 KIR2DS3Q14952 304 aa19.77■□□□□ 0.76
CCS-208ENST00000533244 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.77■□□□□ 0.76
CCS-208ENST00000533244 TTC23LQ6PF05 361 aa19.77■□□□□ 0.76
CCS-208ENST00000533244 NOA1Q8NC60 698 aaKnown RBP19.77■□□□□ 0.76
CCS-208ENST00000533244 MNS1Q8NEH6 495 aa19.77■□□□□ 0.76
CCS-208ENST00000533244 HMGCLL1Q8TB92 370 aa19.77■□□□□ 0.76
CCS-208ENST00000533244 PYROXD1Q8WU10 500 aa19.77■□□□□ 0.76
CCS-208ENST00000533244 CRELD1Q96HD1 420 aa19.77■□□□□ 0.76
CCS-208ENST00000533244 IL17FQ96PD4 163 aa19.77■□□□□ 0.76
CCS-208ENST00000533244 RAB11FIP5Q9BXF6 653 aa19.77■□□□□ 0.76
CCS-208ENST00000533244 FGF21Q9NSA1 209 aa19.77■□□□□ 0.76
CCS-208ENST00000533244 ZFYVE26Q68DK2 2539 aa19.77■□□□□ 0.76
CCS-208ENST00000533244 ARHGEF33A8MVX0 844 aa19.76■□□□□ 0.75
CCS-208ENST00000533244 STK17BO94768 372 aa19.76■□□□□ 0.75
CCS-208ENST00000533244 ARL4DP49703 201 aa19.76■□□□□ 0.75
CCS-208ENST00000533244 CDKN2DP55273 166 aa19.76■□□□□ 0.75
CCS-208ENST00000533244 CUL1Q13616 776 aa19.76■□□□□ 0.75
CCS-208ENST00000533244 SLC5A12Q1EHB4 618 aa19.76■□□□□ 0.75
CCS-208ENST00000533244 EEF1AKMT2Q5JPI9 291 aaKnown RBP19.76■□□□□ 0.75
CCS-208ENST00000533244 BROXQ5VW32 411 aa19.76■□□□□ 0.75
CCS-208ENST00000533244 CYHR1Q6ZMK1 362 aa19.76■□□□□ 0.75
CCS-208ENST00000533244 BPHLQ86WA6 291 aaPredicted RBP19.76■□□□□ 0.75
CCS-208ENST00000533244 SLC26A11Q86WA9 606 aa19.76■□□□□ 0.75
CCS-208ENST00000533244 PPP1R3BQ86XI6 285 aa19.76■□□□□ 0.75
CCS-208ENST00000533244 FBXO15Q8NCQ5 510 aaPredicted RBP19.76■□□□□ 0.75
CCS-208ENST00000533244 MAGEC3Q8TD91 643 aa19.76■□□□□ 0.75
CCS-208ENST00000533244 DENND1AQ8TEH3 1009 aa19.76■□□□□ 0.75
CCS-208ENST00000533244 NKD1Q969G9 470 aa19.76■□□□□ 0.75
CCS-208ENST00000533244 ZNF501Q96CX3 271 aaPredicted RBP19.76■□□□□ 0.75
CCS-208ENST00000533244 FCRL4Q96PJ5 515 aa19.76■□□□□ 0.75
CCS-208ENST00000533244 CHRNA10Q9GZZ6 450 aa19.76■□□□□ 0.75
CCS-208ENST00000533244 PRORYQ9H606 182 aa19.76■□□□□ 0.75
CCS-208ENST00000533244 ZDHHC18Q9NUE0 388 aa19.76■□□□□ 0.75
CCS-208ENST00000533244 TAS2R13Q9NYV9 303 aa19.76■□□□□ 0.75
CCS-208ENST00000533244 SPATA7Q9P0W8 599 aa19.76■□□□□ 0.75
CCS-208ENST00000533244 ZFATQ9P243 1243 aa19.76■□□□□ 0.75
CCS-208ENST00000533244 CIDEBQ9UHD4 219 aa19.76■□□□□ 0.75
CCS-208ENST00000533244 PSAT1Q9Y617 370 aa19.76■□□□□ 0.75
CCS-208ENST00000533244 ESYT3A0FGR9 886 aa19.76■□□□□ 0.75
CCS-208ENST00000533244 PRICKLE3O43900 615 aaPredicted RBP19.76■□□□□ 0.75
CCS-208ENST00000533244 SNRNP200O75643 2136 aaKnown RBP19.76■□□□□ 0.75
CCS-208ENST00000533244 ERGP11308 486 aa19.76■□□□□ 0.75
CCS-208ENST00000533244 PVRP15151 417 aa19.76■□□□□ 0.75
CCS-208ENST00000533244 ZNF28P17035 718 aa19.76■□□□□ 0.75
CCS-208ENST00000533244 SKIV2L2P42285 1042 aaKnown RBP19.76■□□□□ 0.75
CCS-208ENST00000533244 TMPRSS3P57727 454 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms