RNA–Protein interactions for RNA: ENST00000532820.5

CAPRIN1-212, Transcript of cell cycle associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CAPRIN1, Length 3,438 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-212ENST00000532820 SPDYE1Q8NFV5 336 aaPredicted RBP13.06□□□□□ -0.32
CAPRIN1-212ENST00000532820 CHFRQ96EP1 664 aa13.06□□□□□ -0.32
CAPRIN1-212ENST00000532820 EGLN2Q96KS0 407 aa13.06□□□□□ -0.32
CAPRIN1-212ENST00000532820 PPP3R2Q96LZ3 170 aa13.06□□□□□ -0.32
CAPRIN1-212ENST00000532820 FAM83CQ9BQN1 747 aa13.06□□□□□ -0.32
CAPRIN1-212ENST00000532820 CXorf56Q9H5V9 222 aa13.06□□□□□ -0.32
CAPRIN1-212ENST00000532820 ABCD2Q9UBJ2 740 aa13.06□□□□□ -0.32
CAPRIN1-212ENST00000532820 CNOT6Q9ULM6 557 aaKnown RBP13.06□□□□□ -0.32
CAPRIN1-212ENST00000532820 EIF3LQ9Y262 564 aaKnown RBP13.06□□□□□ -0.32
CAPRIN1-212ENST00000532820 GFYI3L273 518 aa13.06□□□□□ -0.32
CAPRIN1-212ENST00000532820 SMNDC1O75940 238 aaKnown RBP eCLIP13.06□□□□□ -0.321e-7■■□□□ 13.3
CAPRIN1-212ENST00000532820 FTH1P02794 183 aa13.06□□□□□ -0.32
CAPRIN1-212ENST00000532820 C6P13671 934 aa13.06□□□□□ -0.32
CAPRIN1-212ENST00000532820 UQCRBP14927 111 aa13.06□□□□□ -0.32
CAPRIN1-212ENST00000532820 GPR1P46091 355 aa13.06□□□□□ -0.32
CAPRIN1-212ENST00000532820 SOX9P48436 509 aa13.06□□□□□ -0.32
CAPRIN1-212ENST00000532820 CMPK2Q5EBM0 449 aa13.06□□□□□ -0.32
CAPRIN1-212ENST00000532820 PLEKHS1Q5SXH7 462 aa13.06□□□□□ -0.32
CAPRIN1-212ENST00000532820 C2orf73Q8N5S3 287 aaPredicted RBP13.06□□□□□ -0.32
CAPRIN1-212ENST00000532820 OR2T34Q8NGX1 318 aa13.06□□□□□ -0.32
CAPRIN1-212ENST00000532820 OR2T3Q8NH03 318 aa13.06□□□□□ -0.32
CAPRIN1-212ENST00000532820 GATA6Q92908 595 aa13.06□□□□□ -0.32
CAPRIN1-212ENST00000532820 CNBD2Q96M20 576 aa13.06□□□□□ -0.32
CAPRIN1-212ENST00000532820 FAM129BQ96TA1 746 aa13.06□□□□□ -0.32
CAPRIN1-212ENST00000532820 CCT7Q99832 543 aa13.06□□□□□ -0.32
CAPRIN1-212ENST00000532820 RPP25Q9BUL9 199 aaKnown RBP13.06□□□□□ -0.32
CAPRIN1-212ENST00000532820 DPY30Q9C005 99 aa13.06□□□□□ -0.32
CAPRIN1-212ENST00000532820 NKX2-4Q9H2Z4 354 aa13.06□□□□□ -0.32
CAPRIN1-212ENST00000532820 SMOXQ9NWM0 555 aa13.06□□□□□ -0.32
CAPRIN1-212ENST00000532820 TMEM98Q9Y2Y6 226 aa13.06□□□□□ -0.32
CAPRIN1-212ENST00000532820 C2orf16Q68DN1 1984 aa13.05□□□□□ -0.32
CAPRIN1-212ENST00000532820 USP34Q70CQ2 3546 aa13.05□□□□□ -0.32
CAPRIN1-212ENST00000532820 PRR23AA6NEV1 266 aa13.05□□□□□ -0.32
CAPRIN1-212ENST00000532820 DFNA5O60443 496 aa13.05□□□□□ -0.32
CAPRIN1-212ENST00000532820 SLC16A8O95907 504 aa13.05□□□□□ -0.32
CAPRIN1-212ENST00000532820 PRNPP04156 253 aa13.05□□□□□ -0.32
CAPRIN1-212ENST00000532820 ASLP04424 464 aa13.05□□□□□ -0.32
CAPRIN1-212ENST00000532820 GSNP06396 782 aa13.05□□□□□ -0.32
CAPRIN1-212ENST00000532820 C8BP07358 591 aa13.05□□□□□ -0.32
CAPRIN1-212ENST00000532820 LYNP07948 512 aa13.05□□□□□ -0.32
CAPRIN1-212ENST00000532820 PFN3P60673 137 aa13.05□□□□□ -0.32
CAPRIN1-212ENST00000532820 CDKL1Q00532 357 aa13.05□□□□□ -0.32
CAPRIN1-212ENST00000532820 TRAP1Q12931 704 aaKnown RBP13.05□□□□□ -0.32
CAPRIN1-212ENST00000532820 GTDC1Q4AE62 458 aa13.05□□□□□ -0.32
CAPRIN1-212ENST00000532820 VITQ6UXI7 678 aa13.05□□□□□ -0.32
CAPRIN1-212ENST00000532820 PHC3Q8NDX5 983 aa13.05□□□□□ -0.32
CAPRIN1-212ENST00000532820 UBTD2Q8WUN7 234 aa13.05□□□□□ -0.32
CAPRIN1-212ENST00000532820 OR8D1Q8WZ84 308 aa13.05□□□□□ -0.32
CAPRIN1-212ENST00000532820 APIPQ96GX9 242 aa13.05□□□□□ -0.32
CAPRIN1-212ENST00000532820 SEPHS2Q99611 448 aa13.05□□□□□ -0.32
CAPRIN1-212ENST00000532820 NRTNQ99748 197 aa13.05□□□□□ -0.32
CAPRIN1-212ENST00000532820 COQ10BQ9H8M1 238 aa13.05□□□□□ -0.32
CAPRIN1-212ENST00000532820 GULP1Q9UBP9 304 aa13.05□□□□□ -0.32
CAPRIN1-212ENST00000532820 SLC27A6Q9Y2P4 619 aa13.05□□□□□ -0.32
CAPRIN1-212ENST00000532820 MYOCOSA0A1B0GUC4 107 aa13.05□□□□□ -0.32
CAPRIN1-212ENST00000532820 TCRBV3S1A0A5B6 114 aa13.05□□□□□ -0.32
CAPRIN1-212ENST00000532820 E7EQ34 232 aa13.05□□□□□ -0.32
CAPRIN1-212ENST00000532820 ATG13O75143 517 aa13.05□□□□□ -0.32
CAPRIN1-212ENST00000532820 SOD1P00441 154 aa13.05□□□□□ -0.32
CAPRIN1-212ENST00000532820 KRT6AP02538 564 aa13.05□□□□□ -0.32
CAPRIN1-212ENST00000532820 KRT6BP04259 564 aa13.05□□□□□ -0.32
CAPRIN1-212ENST00000532820 ADRB3P13945 408 aa13.05□□□□□ -0.32
CAPRIN1-212ENST00000532820 VARSP26640 1264 aaKnown RBP13.05□□□□□ -0.32
CAPRIN1-212ENST00000532820 KRT6CP48668 564 aa13.05□□□□□ -0.32
CAPRIN1-212ENST00000532820 OR4D2P58180 307 aa13.05□□□□□ -0.32
CAPRIN1-212ENST00000532820 ERVK-21P61565 698 aa13.05□□□□□ -0.32
CAPRIN1-212ENST00000532820 GBX1Q14549 363 aa13.05□□□□□ -0.32
CAPRIN1-212ENST00000532820 DUSP6Q16828 381 aa13.05□□□□□ -0.32
CAPRIN1-212ENST00000532820 CYP51A1Q16850 503 aa13.05□□□□□ -0.32
CAPRIN1-212ENST00000532820 HMBOX1Q6NT76 420 aa13.05□□□□□ -0.32
CAPRIN1-212ENST00000532820 APOLD1Q96LR9 279 aa13.05□□□□□ -0.32
CAPRIN1-212ENST00000532820 BATF3Q9NR55 127 aa13.05□□□□□ -0.32
CAPRIN1-212ENST00000532820 VAPAQ9P0L0 249 aa13.05□□□□□ -0.32
CAPRIN1-212ENST00000532820 TRPS1Q9UHF7 1281 aa13.05□□□□□ -0.32
CAPRIN1-212ENST00000532820 SCOCQ9UIL1 159 aa13.05□□□□□ -0.32
CAPRIN1-212ENST00000532820 PCYT1BQ9Y5K3 369 aaPredicted RBP13.05□□□□□ -0.32
CAPRIN1-212ENST00000532820 TSPAN11A1L157 253 aa13.04□□□□□ -0.32
CAPRIN1-212ENST00000532820 SAC3D1A6NKF1 404 aa13.04□□□□□ -0.32
CAPRIN1-212ENST00000532820 BCKDHAP12694 445 aa13.04□□□□□ -0.32
CAPRIN1-212ENST00000532820 DCDC1P59894 354 aa13.04□□□□□ -0.32
CAPRIN1-212ENST00000532820 XKR6Q5GH73 641 aa13.04□□□□□ -0.32
CAPRIN1-212ENST00000532820 TBCELQ5QJ74 424 aa13.04□□□□□ -0.32
CAPRIN1-212ENST00000532820 DLEU7Q6UYE1 221 aa13.04□□□□□ -0.32
CAPRIN1-212ENST00000532820 TERB1Q8NA31 727 aa13.04□□□□□ -0.32
CAPRIN1-212ENST00000532820 WFIKKN2Q8TEU8 576 aa13.04□□□□□ -0.32
CAPRIN1-212ENST00000532820 DTD2Q96FN9 168 aa13.04□□□□□ -0.32
CAPRIN1-212ENST00000532820 SLC29A1Q99808 456 aa13.04□□□□□ -0.32
CAPRIN1-212ENST00000532820 DYRK4Q9NR20 520 aa13.04□□□□□ -0.32
CAPRIN1-212ENST00000532820 DNAJC11Q9NVH1 559 aa13.04□□□□□ -0.32
CAPRIN1-212ENST00000532820 DKK3Q9UBP4 350 aa13.04□□□□□ -0.32
CAPRIN1-212ENST00000532820 KANSL1LA0AUZ9 987 aa13.04□□□□□ -0.32
CAPRIN1-212ENST00000532820 SLC28A1O00337 649 aa13.04□□□□□ -0.32
CAPRIN1-212ENST00000532820 MAP3K13O43283 966 aa13.04□□□□□ -0.32
CAPRIN1-212ENST00000532820 NELFEP18615 380 aaKnown RBP13.04□□□□□ -0.32
CAPRIN1-212ENST00000532820 CD22P20273 847 aa13.04□□□□□ -0.32
CAPRIN1-212ENST00000532820 NFKBIAP25963 317 aa13.04□□□□□ -0.32
CAPRIN1-212ENST00000532820 SLC6A12P48065 614 aa13.04□□□□□ -0.32
CAPRIN1-212ENST00000532820 MRPS35P82673 323 aaKnown RBP13.04□□□□□ -0.32
CAPRIN1-212ENST00000532820 IRF8Q02556 426 aa13.04□□□□□ -0.32
CAPRIN1-212ENST00000532820 RNF220Q5VTB9 566 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 250.3 ms