RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 FNTAP49354 379 aa16.65■□□□□ 0.26
PHRF1-204ENST00000532550 RAB28P51157 221 aa16.65■□□□□ 0.26
PHRF1-204ENST00000532550 ITGA1P56199 1179 aa16.65■□□□□ 0.26
PHRF1-204ENST00000532550 GPS2Q13227 327 aa16.65■□□□□ 0.26
PHRF1-204ENST00000532550 DHX34Q14147 1143 aaKnown RBP16.65■□□□□ 0.26
PHRF1-204ENST00000532550 KIR2DS3Q14952 304 aa16.65■□□□□ 0.26
PHRF1-204ENST00000532550 PLEKHS1Q5SXH7 462 aa16.65■□□□□ 0.26
PHRF1-204ENST00000532550 PRAMEF17Q5VTA0 474 aa16.65■□□□□ 0.26
PHRF1-204ENST00000532550 NEPROQ6NW34 567 aa16.65■□□□□ 0.26
PHRF1-204ENST00000532550 CDHR3Q6ZTQ4 885 aa16.65■□□□□ 0.26
PHRF1-204ENST00000532550 TRIM73Q86UV7 250 aa16.65■□□□□ 0.26
PHRF1-204ENST00000532550 DCUN1D3Q8IWE4 304 aa16.65■□□□□ 0.26
PHRF1-204ENST00000532550 GPR135Q8IZ08 494 aa16.65■□□□□ 0.26
PHRF1-204ENST00000532550 C19orf47Q8N9M1 422 aaKnown RBP16.65■□□□□ 0.26
PHRF1-204ENST00000532550 SLC38A9Q8NBW4 561 aa16.65■□□□□ 0.26
PHRF1-204ENST00000532550 SEC14L1Q92503 715 aa16.65■□□□□ 0.26
PHRF1-204ENST00000532550 SLC22A18Q96BI1 424 aa16.65■□□□□ 0.26
PHRF1-204ENST00000532550 FOPNLQ96NB1 174 aa16.65■□□□□ 0.26
PHRF1-204ENST00000532550 LRFN5Q96NI6 719 aa16.65■□□□□ 0.26
PHRF1-204ENST00000532550 BIRC8Q96P09 236 aa16.65■□□□□ 0.26
PHRF1-204ENST00000532550 ACTR5Q9H9F9 607 aaPredicted RBP16.65■□□□□ 0.26
PHRF1-204ENST00000532550 TUBD1Q9UJT1 453 aa16.65■□□□□ 0.26
PHRF1-204ENST00000532550 FARSAQ9Y285 508 aaKnown RBP16.65■□□□□ 0.26
PHRF1-204ENST00000532550 VPS9D1Q9Y2B5 631 aa16.65■□□□□ 0.26
PHRF1-204ENST00000532550 CRYL1Q9Y2S2 319 aa16.65■□□□□ 0.26
PHRF1-204ENST00000532550 NEU2Q9Y3R4 380 aa16.65■□□□□ 0.26
PHRF1-204ENST00000532550 MRFAP1Q9Y605 127 aa16.65■□□□□ 0.26
PHRF1-204ENST00000532550 HELZ2Q9BYK8 2649 aaKnown RBP16.65■□□□□ 0.26
PHRF1-204ENST00000532550 CDC14CA4D256 554 aa16.64■□□□□ 0.25
PHRF1-204ENST00000532550 MEN1O00255 615 aa16.64■□□□□ 0.25
PHRF1-204ENST00000532550 ZNF185O15231 689 aa16.64■□□□□ 0.25
PHRF1-204ENST00000532550 TMEM63AO94886 807 aa16.64■□□□□ 0.25
PHRF1-204ENST00000532550 ESR1P03372 595 aa16.64■□□□□ 0.25
PHRF1-204ENST00000532550 HBQ1P09105 142 aa16.64■□□□□ 0.25
PHRF1-204ENST00000532550 CHRM3P20309 590 aa16.64■□□□□ 0.25
PHRF1-204ENST00000532550 OGNP20774 298 aaKnown RBP16.64■□□□□ 0.25
PHRF1-204ENST00000532550 CD9P21926 228 aa16.64■□□□□ 0.25
PHRF1-204ENST00000532550 PTPN4P29074 926 aa16.64■□□□□ 0.25
PHRF1-204ENST00000532550 THOC5Q13769 683 aaKnown RBP16.64■□□□□ 0.25
PHRF1-204ENST00000532550 PPP1R7Q15435 360 aa16.64■□□□□ 0.25
PHRF1-204ENST00000532550 SLC5A12Q1EHB4 618 aa16.64■□□□□ 0.25
PHRF1-204ENST00000532550 TYSND1Q2T9J0 566 aa16.64■□□□□ 0.25
PHRF1-204ENST00000532550 ANKRD20A4Q4UJ75 823 aa16.64■□□□□ 0.25
PHRF1-204ENST00000532550 CTSL3PQ5NE16 218 aa16.64■□□□□ 0.25
PHRF1-204ENST00000532550 DSELQ8IZU8 1212 aa16.64■□□□□ 0.25
PHRF1-204ENST00000532550 LPGAT1Q92604 370 aa16.64■□□□□ 0.25
PHRF1-204ENST00000532550 RAD51AP1Q96B01 352 aa16.64■□□□□ 0.25
PHRF1-204ENST00000532550 ZNF669Q96BR6 464 aaPredicted RBP16.64■□□□□ 0.25
PHRF1-204ENST00000532550 SERPINB12Q96P63 405 aa16.64■□□□□ 0.25
PHRF1-204ENST00000532550 ACTL8Q9H568 366 aa16.64■□□□□ 0.25
PHRF1-204ENST00000532550 FAM60AQ9NP50 221 aa16.64■□□□□ 0.25
PHRF1-204ENST00000532550 POLHQ9Y253 713 aa16.64■□□□□ 0.25
PHRF1-204ENST00000532550 GCN1Q92616 2671 aaKnown RBP16.63■□□□□ 0.25
PHRF1-204ENST00000532550 CTAGE9A4FU28 777 aa16.63■□□□□ 0.25
PHRF1-204ENST00000532550 SLC28A2O43868 658 aa16.63■□□□□ 0.25
PHRF1-204ENST00000532550 TCP1P17987 556 aaKnown RBP16.63■□□□□ 0.25
PHRF1-204ENST00000532550 PKLRP30613 574 aa16.63■□□□□ 0.25
PHRF1-204ENST00000532550 ADARP55265 1226 aaKnown RBP16.63■□□□□ 0.25
PHRF1-204ENST00000532550 ZNF517Q6ZMY9 492 aaPredicted RBP16.63■□□□□ 0.25
PHRF1-204ENST00000532550 CILP2Q8IUL8 1156 aa16.63■□□□□ 0.25
PHRF1-204ENST00000532550 PPIL6Q8IXY8 311 aa16.63■□□□□ 0.25
PHRF1-204ENST00000532550 RAB42Q8N4Z0 105 aa16.63■□□□□ 0.25
PHRF1-204ENST00000532550 C2orf73Q8N5S3 287 aaPredicted RBP16.63■□□□□ 0.25
PHRF1-204ENST00000532550 NAT8LQ8N9F0 302 aa16.63■□□□□ 0.25
PHRF1-204ENST00000532550 FLVCR1-AS1Q8TAF5 88 aa16.63■□□□□ 0.25
PHRF1-204ENST00000532550 MAGEC3Q8TD91 643 aa16.63■□□□□ 0.25
PHRF1-204ENST00000532550 CHRNA10Q9GZZ6 450 aa16.63■□□□□ 0.25
PHRF1-204ENST00000532550 CHST8Q9H2A9 424 aa16.63■□□□□ 0.25
PHRF1-204ENST00000532550 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.63■□□□□ 0.25
PHRF1-204ENST00000532550 CIDEBQ9UHD4 219 aa16.63■□□□□ 0.25
PHRF1-204ENST00000532550 MAD1L1Q9Y6D9 718 aa16.63■□□□□ 0.25
PHRF1-204ENST00000532550 SNRNP200O75643 2136 aaKnown RBP16.63■□□□□ 0.25
PHRF1-204ENST00000532550 E5RI56 91 aa16.62■□□□□ 0.25
PHRF1-204ENST00000532550 J3QKU1 62 aa16.62■□□□□ 0.25
PHRF1-204ENST00000532550 RASGRF2O14827 1237 aa16.62■□□□□ 0.25
PHRF1-204ENST00000532550 ZNF749O43361 778 aa16.62■□□□□ 0.25
PHRF1-204ENST00000532550 NIPSNAP2O75323 286 aa16.62■□□□□ 0.25
PHRF1-204ENST00000532550 OR2B3O76000 313 aa16.62■□□□□ 0.25
PHRF1-204ENST00000532550 FURINP09958 794 aa16.62■□□□□ 0.25
PHRF1-204ENST00000532550 PKMP14618 531 aaKnown RBP16.62■□□□□ 0.25
PHRF1-204ENST00000532550 CCNFP41002 786 aa16.62■□□□□ 0.25
PHRF1-204ENST00000532550 GRB7Q14451 532 aa16.62■□□□□ 0.25
PHRF1-204ENST00000532550 SF1Q15637 639 aaKnown RBP16.62■□□□□ 0.25
PHRF1-204ENST00000532550 ZIC1Q15915 447 aa16.62■□□□□ 0.25
PHRF1-204ENST00000532550 ZNF789Q5FWF6 425 aa16.62■□□□□ 0.25
PHRF1-204ENST00000532550 IZUMO3Q5VZ72 239 aa16.62■□□□□ 0.25
PHRF1-204ENST00000532550 CENPUQ71F23 418 aa16.62■□□□□ 0.25
PHRF1-204ENST00000532550 PRICKLE2Q7Z3G6 844 aa16.62■□□□□ 0.25
PHRF1-204ENST00000532550 SYVN1Q86TM6 617 aa16.62■□□□□ 0.25
PHRF1-204ENST00000532550 TMEM135Q86UB9 458 aa16.62■□□□□ 0.25
PHRF1-204ENST00000532550 OR2L8Q8NGY9 312 aa16.62■□□□□ 0.25
PHRF1-204ENST00000532550 IL17FQ96PD4 163 aa16.62■□□□□ 0.25
PHRF1-204ENST00000532550 RUFY1Q96T51 708 aa16.62■□□□□ 0.25
PHRF1-204ENST00000532550 TRIM56Q9BRZ2 755 aaKnown RBP16.62■□□□□ 0.25
PHRF1-204ENST00000532550 RAB11FIP5Q9BXF6 653 aa16.62■□□□□ 0.25
PHRF1-204ENST00000532550 PCMTD2Q9NV79 361 aa16.62■□□□□ 0.25
PHRF1-204ENST00000532550 INTS10Q9NVR2 710 aaKnown RBP16.62■□□□□ 0.25
PHRF1-204ENST00000532550 IRAK4Q9NWZ3 460 aa16.62■□□□□ 0.25
PHRF1-204ENST00000532550 IL1RAPL1Q9NZN1 696 aa16.62■□□□□ 0.25
PHRF1-204ENST00000532550 KCNMB2Q9Y691 235 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms