RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 RPLP2P05387 115 aaKnown RBP6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 MTHFD1P11586 935 aaKnown RBP6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 ERCC2P18074 760 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 IGFBP5P24593 272 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 PRKCHP24723 683 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 AKT1P31749 480 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 IDH2P48735 452 aaKnown RBP6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 NTHL1P78549 312 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 RPA4Q13156 261 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 MED22Q15528 200 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 TIGD6Q17RP2 521 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 CORO6Q6QEF8 472 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 KCNMB4Q86W47 210 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 IGDCC3Q8IVU1 814 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 ZC3H3Q8IXZ2 948 aaKnown RBP6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 CELF2-AS1Q8N7Q2 184 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 OR6P1Q8NGX9 317 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 RIT1Q92963 219 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 TMBIM1Q969X1 311 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 OTUB1Q96FW1 271 aaPredicted RBP6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 VAT1Q99536 393 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 OMDQ99983 421 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 HERPUD2Q9BSE4 406 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 CCDC32Q9BV29 185 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 ITPAQ9BY32 194 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 CYP3A43Q9HB55 503 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 ZNF358Q9NW07 568 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 GLS2Q9UI32 602 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 NENFQ9UMX5 172 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 FARP1Q9Y4F1 1045 aaPredicted RBP6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 PCDHB3Q9Y5E6 796 aa6.67□□□□□ -1.34
TGFBR3-209ENST00000532540 STMND1H3BQB6 276 aa6.66□□□□□ -1.34
TGFBR3-209ENST00000532540 EPHB3P54753 998 aa6.66□□□□□ -1.34
TGFBR3-209ENST00000532540 TWF1Q12792 350 aa6.66□□□□□ -1.34
TGFBR3-209ENST00000532540 TSNQ15631 228 aaKnown RBP6.66□□□□□ -1.34
TGFBR3-209ENST00000532540 VPS26BQ4G0F5 336 aa6.66□□□□□ -1.34
TGFBR3-209ENST00000532540 TIFABQ6ZNK6 161 aa6.66□□□□□ -1.34
TGFBR3-209ENST00000532540 CFAP77Q6ZQR2 320 aa6.66□□□□□ -1.34
TGFBR3-209ENST00000532540 FAM92BQ6ZTR7 304 aa6.66□□□□□ -1.34
TGFBR3-209ENST00000532540 CHMP1BQ7LBR1 199 aa6.66□□□□□ -1.34
TGFBR3-209ENST00000532540 SNX20Q7Z614 316 aa6.66□□□□□ -1.34
TGFBR3-209ENST00000532540 GALNT5Q7Z7M9 940 aa6.66□□□□□ -1.34
TGFBR3-209ENST00000532540 OSTM1Q86WC4 334 aa6.66□□□□□ -1.34
TGFBR3-209ENST00000532540 YAF2Q8IY57 180 aa6.66□□□□□ -1.34
TGFBR3-209ENST00000532540 SVOPLQ8N434 492 aa6.66□□□□□ -1.34
TGFBR3-209ENST00000532540 SLC37A3Q8NCC5 494 aa6.66□□□□□ -1.34
TGFBR3-209ENST00000532540 BCL7CQ8WUZ0 217 aaPredicted RBP6.66□□□□□ -1.34
TGFBR3-209ENST00000532540 MRPS31Q92665 395 aaKnown RBP6.66□□□□□ -1.34
TGFBR3-209ENST00000532540 CENPIQ92674 756 aaPredicted RBP6.66□□□□□ -1.34
TGFBR3-209ENST00000532540 FAM120BQ96EK7 910 aaKnown RBP6.66□□□□□ -1.34
TGFBR3-209ENST00000532540 RDH12Q96NR8 316 aa6.66□□□□□ -1.34
TGFBR3-209ENST00000532540 CYP2S1Q96SQ9 504 aa6.66□□□□□ -1.34
TGFBR3-209ENST00000532540 RAD9AQ99638 391 aa6.66□□□□□ -1.34
TGFBR3-209ENST00000532540 DHRS4Q9BTZ2 278 aa6.66□□□□□ -1.34
TGFBR3-209ENST00000532540 CEP41Q9BYV8 373 aa6.66□□□□□ -1.34
TGFBR3-209ENST00000532540 SDCBP2Q9H190 292 aa6.66□□□□□ -1.34
TGFBR3-209ENST00000532540 RANGRFQ9HD47 186 aaPredicted RBP6.66□□□□□ -1.34
TGFBR3-209ENST00000532540 DMAC2Q9NW81 257 aa6.66□□□□□ -1.34
TGFBR3-209ENST00000532540 B3GNT2Q9NY97 397 aa6.66□□□□□ -1.34
TGFBR3-209ENST00000532540 TMEM181Q9P2C4 612 aa6.66□□□□□ -1.34
TGFBR3-209ENST00000532540 RAB23Q9ULC3 237 aa6.66□□□□□ -1.34
TGFBR3-209ENST00000532540 RNF6Q9Y252 685 aa6.66□□□□□ -1.34
TGFBR3-209ENST00000532540 SLC9A8Q9Y2E8 581 aa6.66□□□□□ -1.34
TGFBR3-209ENST00000532540 C3orf70A6NLC5 250 aaPredicted RBP6.66□□□□□ -1.34
TGFBR3-209ENST00000532540 A8MUA0 341 aa6.66□□□□□ -1.34
TGFBR3-209ENST00000532540 ADAM12O43184 909 aa6.66□□□□□ -1.34
TGFBR3-209ENST00000532540 DFNA5O60443 496 aa6.66□□□□□ -1.34
TGFBR3-209ENST00000532540 EOMESO95936 686 aa6.66□□□□□ -1.34
TGFBR3-209ENST00000532540 C8AP07357 584 aa6.66□□□□□ -1.34
TGFBR3-209ENST00000532540 CD72P21854 359 aa6.66□□□□□ -1.34
TGFBR3-209ENST00000532540 EVI2BP34910 448 aa6.66□□□□□ -1.34
TGFBR3-209ENST00000532540 DDOSTP39656 456 aa6.66□□□□□ -1.34
TGFBR3-209ENST00000532540 TPMTP51580 245 aa6.66□□□□□ -1.34
TGFBR3-209ENST00000532540 MAZP56270 477 aaKnown RBP6.66□□□□□ -1.34
TGFBR3-209ENST00000532540 ERVK-8P63133 956 aa6.66□□□□□ -1.34
TGFBR3-209ENST00000532540 CYP4F8P98187 520 aa6.66□□□□□ -1.34
TGFBR3-209ENST00000532540 TAF10Q12962 218 aa6.66□□□□□ -1.34
TGFBR3-209ENST00000532540 NOMO1Q15155 1222 aa6.66□□□□□ -1.34
TGFBR3-209ENST00000532540 ATP6AP1Q15904 470 aa6.66□□□□□ -1.34
TGFBR3-209ENST00000532540 RBBP7Q16576 425 aa6.66□□□□□ -1.34
TGFBR3-209ENST00000532540 DUSP7Q16829 419 aa6.66□□□□□ -1.34
TGFBR3-209ENST00000532540 C16orf59Q7L2K0 433 aa6.66□□□□□ -1.34
TGFBR3-209ENST00000532540 ADGRD2Q7Z7M1 963 aa6.66□□□□□ -1.34
TGFBR3-209ENST00000532540 LSMEM2Q8N112 164 aa6.66□□□□□ -1.34
TGFBR3-209ENST00000532540 SRFBP1Q8NEF9 429 aaKnown RBP6.66□□□□□ -1.34
TGFBR3-209ENST00000532540 PPHLN1Q8NEY8 458 aaKnown RBP6.66□□□□□ -1.34
TGFBR3-209ENST00000532540 RNASE11Q8TAA1 199 aaKnown RBP6.66□□□□□ -1.34
TGFBR3-209ENST00000532540 HCAR2Q8TDS4 363 aa6.66□□□□□ -1.34
TGFBR3-209ENST00000532540 IPCEF1Q8WWN9 437 aaPredicted RBP6.66□□□□□ -1.34
TGFBR3-209ENST00000532540 SMG7Q92540 1137 aaKnown RBP6.66□□□□□ -1.34
TGFBR3-209ENST00000532540 ERMAPQ96PL5 475 aaPredicted RBP6.66□□□□□ -1.34
TGFBR3-209ENST00000532540 GAS2L1Q99501 681 aaPredicted RBP6.66□□□□□ -1.34
TGFBR3-209ENST00000532540 NARFLQ9H6Q4 476 aa6.66□□□□□ -1.34
TGFBR3-209ENST00000532540 ABCB9Q9NP78 766 aa6.66□□□□□ -1.34
TGFBR3-209ENST00000532540 ERVK13-1Q9NX77 482 aa6.66□□□□□ -1.34
TGFBR3-209ENST00000532540 KIAA1522Q9P206 1035 aaPredicted RBP6.66□□□□□ -1.34
TGFBR3-209ENST00000532540 EIF3KQ9UBQ5 218 aaKnown RBP6.66□□□□□ -1.34
TGFBR3-209ENST00000532540 IKZF3Q9UKT9 509 aa6.66□□□□□ -1.34
TGFBR3-209ENST00000532540 MYH9P35579 1960 aaKnown RBP6.66□□□□□ -1.34
TGFBR3-209ENST00000532540 A0A1W2PRU2 124 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms