RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 TDRKHQ9Y2W6 561 aaKnown RBP13.5□□□□□ -0.25
TSPAN4-220ENST00000532375 TCRBV9S1A1TA0A576 114 aa13.49□□□□□ -0.25
TSPAN4-220ENST00000532375 E5RI56 91 aa13.49□□□□□ -0.25
TSPAN4-220ENST00000532375 CHRM5P08912 532 aaPredicted RBP13.49□□□□□ -0.25
TSPAN4-220ENST00000532375 MPC1LP0DKB6 136 aa13.49□□□□□ -0.25
TSPAN4-220ENST00000532375 FOLR1P15328 257 aa13.49□□□□□ -0.25
TSPAN4-220ENST00000532375 SHMT2P34897 504 aa13.49□□□□□ -0.25
TSPAN4-220ENST00000532375 RAB28P51157 221 aa13.49□□□□□ -0.25
TSPAN4-220ENST00000532375 PCBP4P57723 403 aaKnown RBP13.49□□□□□ -0.25
TSPAN4-220ENST00000532375 CUL1Q13616 776 aa13.49□□□□□ -0.25
TSPAN4-220ENST00000532375 GLE1Q53GS7 698 aaKnown RBP13.49□□□□□ -0.25
TSPAN4-220ENST00000532375 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.49□□□□□ -0.25
TSPAN4-220ENST00000532375 C3orf62Q6ZUJ4 267 aa13.49□□□□□ -0.25
TSPAN4-220ENST00000532375 ZC3HC1Q86WB0 502 aaKnown RBP13.49□□□□□ -0.25
TSPAN4-220ENST00000532375 ZFAND4Q86XD8 727 aa13.49□□□□□ -0.25
TSPAN4-220ENST00000532375 FAM129CQ86XR2 697 aa13.49□□□□□ -0.25
TSPAN4-220ENST00000532375 KMT5CQ86Y97 462 aa13.49□□□□□ -0.25
TSPAN4-220ENST00000532375 LRRN4CLQ8ND94 238 aa13.49□□□□□ -0.25
TSPAN4-220ENST00000532375 ZNF248Q8NDW4 579 aa13.49□□□□□ -0.25
TSPAN4-220ENST00000532375 HMGCLL1Q8TB92 370 aa13.49□□□□□ -0.25
TSPAN4-220ENST00000532375 ASB11Q8WXH4 323 aa13.49□□□□□ -0.25
TSPAN4-220ENST00000532375 DLG3Q92796 817 aa13.49□□□□□ -0.25
TSPAN4-220ENST00000532375 RAD51AP1Q96B01 352 aa13.49□□□□□ -0.25
TSPAN4-220ENST00000532375 OLFM1Q99784 485 aa13.49□□□□□ -0.25
TSPAN4-220ENST00000532375 CTRCQ99895 268 aa13.49□□□□□ -0.25
TSPAN4-220ENST00000532375 ZMYND15Q9H091 742 aa13.49□□□□□ -0.25
TSPAN4-220ENST00000532375 CCDC68Q9H2F9 335 aa13.49□□□□□ -0.25
TSPAN4-220ENST00000532375 L2HGDHQ9H9P8 463 aa13.49□□□□□ -0.25
TSPAN4-220ENST00000532375 PPANQ9NQ55 473 aaKnown RBP13.49□□□□□ -0.25
TSPAN4-220ENST00000532375 C1GALT1Q9NS00 363 aa13.49□□□□□ -0.25
TSPAN4-220ENST00000532375 ACTR10Q9NZ32 417 aa13.49□□□□□ -0.25
TSPAN4-220ENST00000532375 SLC9B1P1A6NJY1 282 aa13.48□□□□□ -0.25
TSPAN4-220ENST00000532375 FAM159BA6NKW6 160 aa13.48□□□□□ -0.25
TSPAN4-220ENST00000532375 ARHGEF33A8MVX0 844 aa13.48□□□□□ -0.25
TSPAN4-220ENST00000532375 EIF3FO00303 357 aaPredicted RBP13.48□□□□□ -0.25
TSPAN4-220ENST00000532375 MATN2O00339 956 aa13.48□□□□□ -0.25
TSPAN4-220ENST00000532375 RASGRF2O14827 1237 aa13.48□□□□□ -0.25
TSPAN4-220ENST00000532375 RASSF9O75901 435 aa13.48□□□□□ -0.25
TSPAN4-220ENST00000532375 TSPAN12O95859 305 aa13.48□□□□□ -0.25
TSPAN4-220ENST00000532375 CBSLP0DN79 551 aa13.48□□□□□ -0.25
TSPAN4-220ENST00000532375 ERGP11308 486 aa13.48□□□□□ -0.25
TSPAN4-220ENST00000532375 FGF5P12034 268 aa13.48□□□□□ -0.25
TSPAN4-220ENST00000532375 PVRP15151 417 aa13.48□□□□□ -0.25
TSPAN4-220ENST00000532375 ST6GAL1P15907 406 aa13.48□□□□□ -0.25
TSPAN4-220ENST00000532375 UGT2B7P16662 529 aa13.48□□□□□ -0.25
TSPAN4-220ENST00000532375 FDXRP22570 491 aa13.48□□□□□ -0.25
TSPAN4-220ENST00000532375 CBSP35520 551 aa13.48□□□□□ -0.25
TSPAN4-220ENST00000532375 BDKRB1P46663 353 aa13.48□□□□□ -0.25
TSPAN4-220ENST00000532375 TLE3Q04726 772 aa13.48□□□□□ -0.25
TSPAN4-220ENST00000532375 CLN3Q13286 438 aa13.48□□□□□ -0.25
TSPAN4-220ENST00000532375 KCNAB1Q14722 419 aa13.48□□□□□ -0.25
TSPAN4-220ENST00000532375 TGIF1Q15583 401 aa13.48□□□□□ -0.25
TSPAN4-220ENST00000532375 ZIC1Q15915 447 aa13.48□□□□□ -0.25
TSPAN4-220ENST00000532375 UBAP2Q5T6F2 1119 aaKnown RBP13.48□□□□□ -0.25
TSPAN4-220ENST00000532375 HECTD2Q5U5R9 776 aa13.48□□□□□ -0.25
TSPAN4-220ENST00000532375 PAQR3Q6TCH7 311 aa13.48□□□□□ -0.25
TSPAN4-220ENST00000532375 SPESP1Q6UW49 350 aa13.48□□□□□ -0.25
TSPAN4-220ENST00000532375 TMEM207Q6UWW9 146 aa13.48□□□□□ -0.25
TSPAN4-220ENST00000532375 CAPN12Q6ZSI9 719 aa13.48□□□□□ -0.25
TSPAN4-220ENST00000532375 SLC26A11Q86WA9 606 aa13.48□□□□□ -0.25
TSPAN4-220ENST00000532375 SPACA3Q8IXA5 215 aa13.48□□□□□ -0.25
TSPAN4-220ENST00000532375 PALM2Q8IXS6 379 aa13.48□□□□□ -0.25
TSPAN4-220ENST00000532375 CPNE9Q8IYJ1 553 aa13.48□□□□□ -0.25
TSPAN4-220ENST00000532375 CEP112Q8N8E3 955 aa13.48□□□□□ -0.25
TSPAN4-220ENST00000532375 FBXO15Q8NCQ5 510 aaPredicted RBP13.48□□□□□ -0.25
TSPAN4-220ENST00000532375 OR2L8Q8NGY9 312 aa13.48□□□□□ -0.25
TSPAN4-220ENST00000532375 EEF1AKMT1Q8WVE0 214 aa13.48□□□□□ -0.25
TSPAN4-220ENST00000532375 TRAPPC9Q96Q05 1148 aa13.48□□□□□ -0.25
TSPAN4-220ENST00000532375 FAM114A2Q9NRY5 505 aa13.48□□□□□ -0.25
TSPAN4-220ENST00000532375 ZFATQ9P243 1243 aa13.48□□□□□ -0.25
TSPAN4-220ENST00000532375 TSR3Q9UJK0 312 aaKnown RBP13.48□□□□□ -0.25
TSPAN4-220ENST00000532375 CORO1CQ9ULV4 474 aaPredicted RBP13.48□□□□□ -0.25
TSPAN4-220ENST00000532375 VWA7Q9Y334 891 aa13.48□□□□□ -0.25
TSPAN4-220ENST00000532375 HEATR5BQ9P2D3 2071 aa13.48□□□□□ -0.25
TSPAN4-220ENST00000532375 A0A1W2PPV9 198 aa13.47□□□□□ -0.25
TSPAN4-220ENST00000532375 PIPSLA2A3N6 862 aa13.47□□□□□ -0.25
TSPAN4-220ENST00000532375 GSAPA4D1B5 854 aa13.47□□□□□ -0.25
TSPAN4-220ENST00000532375 C2orf74A8MZ97 194 aa13.47□□□□□ -0.25
TSPAN4-220ENST00000532375 MYO1CO00159 1063 aa13.47□□□□□ -0.25
TSPAN4-220ENST00000532375 POLR1CO15160 346 aaPredicted RBP13.47□□□□□ -0.25
TSPAN4-220ENST00000532375 EFSO43281 561 aa13.47□□□□□ -0.25
TSPAN4-220ENST00000532375 VPS26AO75436 327 aa13.47□□□□□ -0.25
TSPAN4-220ENST00000532375 WISP3O95389 354 aaPredicted RBP13.47□□□□□ -0.25
TSPAN4-220ENST00000532375 ZBTB11O95625 1053 aaPredicted RBP13.47□□□□□ -0.25
TSPAN4-220ENST00000532375 RPN2P04844 631 aa13.47□□□□□ -0.25
TSPAN4-220ENST00000532375 GSTA2P09210 222 aa13.47□□□□□ -0.25
TSPAN4-220ENST00000532375 ENO3P13929 434 aaPredicted RBP13.47□□□□□ -0.25
TSPAN4-220ENST00000532375 ZNF28P17035 718 aa13.47□□□□□ -0.25
TSPAN4-220ENST00000532375 MCM3P25205 808 aa13.47□□□□□ -0.25
TSPAN4-220ENST00000532375 SKIV2L2P42285 1042 aaKnown RBP13.47□□□□□ -0.25
TSPAN4-220ENST00000532375 GABRA4P48169 554 aa13.47□□□□□ -0.25
TSPAN4-220ENST00000532375 RAB15P59190 212 aa13.47□□□□□ -0.25
TSPAN4-220ENST00000532375 HSD11B2P80365 405 aa13.47□□□□□ -0.25
TSPAN4-220ENST00000532375 PRKAA1Q13131 559 aa13.47□□□□□ -0.25
TSPAN4-220ENST00000532375 CYP2A13Q16696 494 aa13.47□□□□□ -0.25
TSPAN4-220ENST00000532375 TTLL9Q3SXZ7 439 aa13.47□□□□□ -0.25
TSPAN4-220ENST00000532375 DCAF12Q5T6F0 453 aa13.47□□□□□ -0.25
TSPAN4-220ENST00000532375 ARMC6Q6NXE6 501 aa13.47□□□□□ -0.25
TSPAN4-220ENST00000532375 TIPARPQ7Z3E1 657 aaKnown RBP13.47□□□□□ -0.25
TSPAN4-220ENST00000532375 PIWIL4Q7Z3Z4 852 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms