RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 LINC01555Q8NAE3 123 aa14.03□□□□□ -0.16
CPSF1-206ENST00000531480 OR4E2Q8NGC2 313 aa14.03□□□□□ -0.16
CPSF1-206ENST00000531480 FLVCR1-AS1Q8TAF5 88 aa14.03□□□□□ -0.16
CPSF1-206ENST00000531480 DENND1AQ8TEH3 1009 aa14.03□□□□□ -0.16
CPSF1-206ENST00000531480 ANKRD49Q8WVL7 239 aa14.03□□□□□ -0.16
CPSF1-206ENST00000531480 NCSTNQ92542 709 aa14.03□□□□□ -0.16
CPSF1-206ENST00000531480 DLG3Q92796 817 aa14.03□□□□□ -0.16
CPSF1-206ENST00000531480 LINGO1Q96FE5 620 aa14.03□□□□□ -0.16
CPSF1-206ENST00000531480 CD180Q99467 661 aa14.03□□□□□ -0.16
CPSF1-206ENST00000531480 NRTNQ99748 197 aa14.03□□□□□ -0.16
CPSF1-206ENST00000531480 CCDC77Q9BR77 488 aa14.03□□□□□ -0.16
CPSF1-206ENST00000531480 RAB11FIP5Q9BXF6 653 aa14.03□□□□□ -0.16
CPSF1-206ENST00000531480 SLC12A9Q9BXP2 914 aa14.03□□□□□ -0.16
CPSF1-206ENST00000531480 SEMA6CQ9H3T2 930 aa14.03□□□□□ -0.16
CPSF1-206ENST00000531480 SRMSQ9H3Y6 488 aa14.03□□□□□ -0.16
CPSF1-206ENST00000531480 SYTL2Q9HCH5 934 aa14.03□□□□□ -0.16
CPSF1-206ENST00000531480 TMEM9Q9P0T7 183 aa14.03□□□□□ -0.16
CPSF1-206ENST00000531480 SPATA7Q9P0W8 599 aa14.03□□□□□ -0.16
CPSF1-206ENST00000531480 KLK13Q9UKR3 277 aa14.03□□□□□ -0.16
CPSF1-206ENST00000531480 SLC39A10Q9ULF5 831 aa14.03□□□□□ -0.16
CPSF1-206ENST00000531480 ANKRD12Q6UB98 2062 aa14.02□□□□□ -0.16
CPSF1-206ENST00000531480 PCM1Q15154 2024 aa14.02□□□□□ -0.16
CPSF1-206ENST00000531480 A0A1W2PNU3 283 aaPredicted RBP14.02□□□□□ -0.17
CPSF1-206ENST00000531480 OR6C74A6NCV1 312 aa14.02□□□□□ -0.17
CPSF1-206ENST00000531480 C1QTNF9BB2RNN3 333 aa14.02□□□□□ -0.17
CPSF1-206ENST00000531480 BTN3A3O00478 584 aa14.02□□□□□ -0.17
CPSF1-206ENST00000531480 BTN3A1O00481 513 aa14.02□□□□□ -0.17
CPSF1-206ENST00000531480 CAPN5O15484 640 aaPredicted RBP14.02□□□□□ -0.17
CPSF1-206ENST00000531480 PRICKLE3O43900 615 aaPredicted RBP14.02□□□□□ -0.17
CPSF1-206ENST00000531480 CATP04040 527 aaKnown RBP14.02□□□□□ -0.17
CPSF1-206ENST00000531480 C1QTNF9P0C862 333 aa14.02□□□□□ -0.17
CPSF1-206ENST00000531480 SLC35E2BP0CK96 405 aa14.02□□□□□ -0.17
CPSF1-206ENST00000531480 STMN1P16949 149 aa14.02□□□□□ -0.17
CPSF1-206ENST00000531480 AMD1P17707 334 aa14.02□□□□□ -0.17
CPSF1-206ENST00000531480 CNTFP26441 200 aa14.02□□□□□ -0.17
CPSF1-206ENST00000531480 BDKRB1P46663 353 aa14.02□□□□□ -0.17
CPSF1-206ENST00000531480 SERPINB9P50453 376 aa14.02□□□□□ -0.17
CPSF1-206ENST00000531480 INHBCP55103 352 aa14.02□□□□□ -0.17
CPSF1-206ENST00000531480 GFERP55789 205 aa14.02□□□□□ -0.17
CPSF1-206ENST00000531480 RAB10P61026 200 aa14.02□□□□□ -0.17
CPSF1-206ENST00000531480 EIF3IQ13347 325 aaKnown RBP14.02□□□□□ -0.17
CPSF1-206ENST00000531480 ZNF460Q14592 562 aa14.02□□□□□ -0.17
CPSF1-206ENST00000531480 USP10Q14694 798 aaKnown RBP14.02□□□□□ -0.17
CPSF1-206ENST00000531480 ARHGAP19Q14CB8 494 aa14.02□□□□□ -0.17
CPSF1-206ENST00000531480 RASA2Q15283 850 aa14.02□□□□□ -0.17
CPSF1-206ENST00000531480 CYP2A13Q16696 494 aa14.02□□□□□ -0.17
CPSF1-206ENST00000531480 IGF2-ASQ6U949 168 aa14.02□□□□□ -0.17
CPSF1-206ENST00000531480 SBSNQ6UWP8 590 aa14.02□□□□□ -0.17
CPSF1-206ENST00000531480 MYO1HQ8N1T3 1032 aa14.02□□□□□ -0.17
CPSF1-206ENST00000531480 MREGQ8N565 214 aa14.02□□□□□ -0.17
CPSF1-206ENST00000531480 OR2L8Q8NGY9 312 aa14.02□□□□□ -0.17
CPSF1-206ENST00000531480 CFAP61Q8NHU2 1237 aa14.02□□□□□ -0.17
CPSF1-206ENST00000531480 JPH3Q8WXH2 748 aaPredicted RBP14.02□□□□□ -0.17
CPSF1-206ENST00000531480 ZDHHC12Q96GR4 267 aa14.02□□□□□ -0.17
CPSF1-206ENST00000531480 PITPNM3Q9BZ71 974 aa14.02□□□□□ -0.17
CPSF1-206ENST00000531480 NRSN2Q9GZP1 204 aa14.02□□□□□ -0.17
CPSF1-206ENST00000531480 DERL2Q9GZP9 239 aa14.02□□□□□ -0.17
CPSF1-206ENST00000531480 VIPAS39Q9H9C1 493 aa14.02□□□□□ -0.17
CPSF1-206ENST00000531480 CAB39LQ9H9S4 337 aa14.02□□□□□ -0.17
CPSF1-206ENST00000531480 PPCSQ9HAB8 311 aa14.02□□□□□ -0.17
CPSF1-206ENST00000531480 GPAMQ9HCL2 828 aa14.02□□□□□ -0.17
CPSF1-206ENST00000531480 HRASLS2Q9NWW9 162 aa14.02□□□□□ -0.17
CPSF1-206ENST00000531480 ADAMTS6Q9UKP5 1117 aa14.02□□□□□ -0.17
CPSF1-206ENST00000531480 POMT2Q9UKY4 750 aa14.02□□□□□ -0.17
CPSF1-206ENST00000531480 NOVA2Q9UNW9 492 aaKnown RBP14.02□□□□□ -0.17
CPSF1-206ENST00000531480 EXOC1LA0A1B0GW35 172 aa14.01□□□□□ -0.17
CPSF1-206ENST00000531480 FAM149AA5PLN7 773 aa14.01□□□□□ -0.17
CPSF1-206ENST00000531480 ZBTB14O43829 449 aa14.01□□□□□ -0.17
CPSF1-206ENST00000531480 ALDOAP04075 364 aaKnown RBP14.01□□□□□ -0.17
CPSF1-206ENST00000531480 INHBAP08476 426 aa14.01□□□□□ -0.17
CPSF1-206ENST00000531480 ENO2P09104 434 aaPredicted RBP14.01□□□□□ -0.17
CPSF1-206ENST00000531480 CRABP2P29373 138 aa14.01□□□□□ -0.17
CPSF1-206ENST00000531480 PPP1CAP62136 330 aa14.01□□□□□ -0.17
CPSF1-206ENST00000531480 NAA30Q147X3 362 aaPredicted RBP14.01□□□□□ -0.17
CPSF1-206ENST00000531480 PPP1R3AQ16821 1122 aa14.01□□□□□ -0.17
CPSF1-206ENST00000531480 MROH9Q5TGP6 573 aa14.01□□□□□ -0.17
CPSF1-206ENST00000531480 TTC23LQ6PF05 361 aa14.01□□□□□ -0.17
CPSF1-206ENST00000531480 OR9A1PQ8NGU1 263 aa14.01□□□□□ -0.17
CPSF1-206ENST00000531480 UHMK1Q8TAS1 419 aaKnown RBP14.01□□□□□ -0.17
CPSF1-206ENST00000531480 SKA2Q8WVK7 121 aaPredicted RBP14.01□□□□□ -0.17
CPSF1-206ENST00000531480 KLHL6Q8WZ60 621 aa14.01□□□□□ -0.17
CPSF1-206ENST00000531480 CCDC74BQ96LY2 380 aa14.01□□□□□ -0.17
CPSF1-206ENST00000531480 TMEM121BQ9BXQ6 578 aaPredicted RBP14.01□□□□□ -0.17
CPSF1-206ENST00000531480 ZNF768Q9H5H4 540 aaKnown RBP14.01□□□□□ -0.17
CPSF1-206ENST00000531480 XKR8Q9H6D3 395 aa14.01□□□□□ -0.17
CPSF1-206ENST00000531480 PARVBQ9HBI1 364 aa14.01□□□□□ -0.17
CPSF1-206ENST00000531480 EURLQ9NYK6 297 aa14.01□□□□□ -0.17
CPSF1-206ENST00000531480 IKZF3Q9UKT9 509 aa14.01□□□□□ -0.17
CPSF1-206ENST00000531480 PDE10AQ9Y233 779 aa14.01□□□□□ -0.17
CPSF1-206ENST00000531480 TDRKHQ9Y2W6 561 aaKnown RBP14.01□□□□□ -0.17
CPSF1-206ENST00000531480 ASPMQ8IZT6 3477 aa14.01□□□□□ -0.17
CPSF1-206ENST00000531480 CCDC187A0A096LP49 1063 aa14□□□□□ -0.17
CPSF1-206ENST00000531480 CCDC189A1A4V9 331 aa14□□□□□ -0.17
CPSF1-206ENST00000531480 TLCD2A6NGC4 264 aa14□□□□□ -0.17
CPSF1-206ENST00000531480 GOLGA6L10A6NI86 522 aa14□□□□□ -0.17
CPSF1-206ENST00000531480 C2orf74A8MZ97 194 aa14□□□□□ -0.17
CPSF1-206ENST00000531480 PHGDHO43175 533 aaKnown RBP14□□□□□ -0.17
CPSF1-206ENST00000531480 CHRM5P08912 532 aaPredicted RBP14□□□□□ -0.17
CPSF1-206ENST00000531480 NUDT17P0C025 328 aa14□□□□□ -0.17
CPSF1-206ENST00000531480 POLR2CP19387 275 aaPredicted RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms