RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 ZNF77Q15935 545 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 FXNQ16595 210 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 FUT11Q495W5 492 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 DGKKQ5KSL6 1271 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 IL23RQ5VWK5 629 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 TRIM68Q6AZZ1 485 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 ANO7Q6IWH7 933 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 GTF2H2CQ6P1K8 395 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 CRTC1Q6UUV9 634 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 FAM151BQ6UXP7 276 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 GDPD4Q6W3E5 623 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 MSANTD1Q6ZTZ1 278 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 LRRC70Q7Z2Q7 622 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 SYVN1Q86TM6 617 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 NRSN1Q8IZ57 195 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 PACRGLQ8N7B6 248 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 BHLHE22Q8NFJ8 381 aaPredicted RBP5.45□□□□□ -1.54
PCF11-205ENST00000530906 TNIP2Q8NFZ5 429 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 HMGCLL1Q8TB92 370 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 GDPD5Q8WTR4 605 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 PYDC1Q8WXC3 89 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 ATL1Q8WXF7 558 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 HERVK_113Q902F9 699 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 EID2BQ96D98 161 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 SPDL1Q96EA4 605 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 DCUN1D1Q96GG9 259 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 SLC45A3Q96JT2 553 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 PPP1R36Q96LQ0 422 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 VPS35Q96QK1 796 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 ZBTB18Q99592 522 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 NPAS2Q99743 824 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 SH3GL1Q99961 368 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 HEPHQ9BQS7 1158 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 ZSCAN5AQ9BUG6 496 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 BBS2Q9BXC9 721 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 CD244Q9BZW8 370 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 UNKQ9C0B0 810 aaKnown RBP5.45□□□□□ -1.54
PCF11-205ENST00000530906 TUBB1Q9H4B7 451 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 EPHX3Q9H6B9 360 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 BRD9Q9H8M2 597 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 BPIFA1Q9NP55 256 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 TNFRSF12AQ9NP84 129 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 SEMA4BQ9NPR2 832 aaPredicted RBP5.45□□□□□ -1.54
PCF11-205ENST00000530906 TLR9Q9NR96 1032 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 ARMC1Q9NVT9 282 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 GEMIN8Q9NWZ8 242 aaKnown RBP5.45□□□□□ -1.54
PCF11-205ENST00000530906 ACTR3BQ9P1U1 418 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 OPTCQ9UBM4 332 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 EIF2B4Q9UI10 523 aaKnown RBP5.45□□□□□ -1.54
PCF11-205ENST00000530906 FBXO10Q9UK96 956 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 INTS6Q9UL03 887 aaKnown RBP5.45□□□□□ -1.54
PCF11-205ENST00000530906 G3BP2Q9UN86 482 aaKnown RBP5.45□□□□□ -1.54
PCF11-205ENST00000530906 SLC27A6Q9Y2P4 619 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 TMED5Q9Y3A6 229 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 FIS1Q9Y3D6 152 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 DTNAQ9Y4J8 743 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 AP4S1Q9Y587 144 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 ANGPTL3Q9Y5C1 460 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 ACTL7AQ9Y615 435 aa5.45□□□□□ -1.54
PCF11-205ENST00000530906 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.45□□□□□ -1.54
PCF11-205ENST00000530906 NPIPB15A6NHN6 443 aaPredicted RBP5.44□□□□□ -1.54
PCF11-205ENST00000530906 CCDC154A6NI56 674 aa5.44□□□□□ -1.54
PCF11-205ENST00000530906 UPK3BL1B0FP48 263 aa5.44□□□□□ -1.54
PCF11-205ENST00000530906 UPK3BL2E5RIL1 263 aa5.44□□□□□ -1.54
PCF11-205ENST00000530906 E7ENX8 843 aa5.44□□□□□ -1.54
PCF11-205ENST00000530906 H0Y858 1186 aa5.44□□□□□ -1.54
PCF11-205ENST00000530906 NR5A2O00482 541 aa5.44□□□□□ -1.54
PCF11-205ENST00000530906 HNRNPRO43390 633 aaKnown RBP5.44□□□□□ -1.54
PCF11-205ENST00000530906 DENRO43583 198 aaKnown RBP5.44□□□□□ -1.54
PCF11-205ENST00000530906 KIF1CO43896 1103 aaKnown RBP5.44□□□□□ -1.54
PCF11-205ENST00000530906 SYNCRIPO60506 623 aaKnown RBP5.44□□□□□ -1.54
PCF11-205ENST00000530906 ICMTO60725 284 aa5.44□□□□□ -1.54
PCF11-205ENST00000530906 PLXNA2O75051 1894 aa5.44□□□□□ -1.54
PCF11-205ENST00000530906 STK16O75716 305 aa5.44□□□□□ -1.54
PCF11-205ENST00000530906 CLDN7O95471 211 aa5.44□□□□□ -1.54
PCF11-205ENST00000530906 RHOP08100 348 aa5.44□□□□□ -1.54
PCF11-205ENST00000530906 ALPIP09923 528 aa5.44□□□□□ -1.54
PCF11-205ENST00000530906 HIST1H2AGP0C0S8 130 aaPredicted RBP5.44□□□□□ -1.54
PCF11-205ENST00000530906 LINC00032P0C843 101 aa5.44□□□□□ -1.54
PCF11-205ENST00000530906 PRSS56P0CW18 603 aa5.44□□□□□ -1.54
PCF11-205ENST00000530906 TYRP14679 529 aa5.44□□□□□ -1.54
PCF11-205ENST00000530906 HIST1H2ADP20671 130 aa5.44□□□□□ -1.54
PCF11-205ENST00000530906 CYP2A7P20853 494 aa5.44□□□□□ -1.54
PCF11-205ENST00000530906 PRPH2P23942 346 aa5.44□□□□□ -1.54
PCF11-205ENST00000530906 AOAHP28039 575 aa5.44□□□□□ -1.54
PCF11-205ENST00000530906 HMOX2P30519 316 aa5.44□□□□□ -1.54
PCF11-205ENST00000530906 CA8P35219 290 aa5.44□□□□□ -1.54
PCF11-205ENST00000530906 CTNNB1P35222 781 aa5.44□□□□□ -1.54
PCF11-205ENST00000530906 CDKN1CP49918 316 aaPredicted RBP5.44□□□□□ -1.54
PCF11-205ENST00000530906 POLR2JP52435 117 aaKnown RBP5.44□□□□□ -1.54
PCF11-205ENST00000530906 HK3P52790 923 aa5.44□□□□□ -1.54
PCF11-205ENST00000530906 MRPS22P82650 360 aaKnown RBP5.44□□□□□ -1.54
PCF11-205ENST00000530906 PLOD1Q02809 727 aaPredicted RBP5.44□□□□□ -1.54
PCF11-205ENST00000530906 TRAF3Q13114 568 aa5.44□□□□□ -1.54
PCF11-205ENST00000530906 BOP1Q14137 746 aaKnown RBP5.44□□□□□ -1.54
PCF11-205ENST00000530906 ADRM1Q16186 407 aa5.44□□□□□ -1.54
PCF11-205ENST00000530906 DPY19L1Q2PZI1 675 aa5.44□□□□□ -1.54
PCF11-205ENST00000530906 GRAMD1BQ3KR37 738 aa5.44□□□□□ -1.54
PCF11-205ENST00000530906 C6orf136Q5SQH8 315 aa5.44□□□□□ -1.54
PCF11-205ENST00000530906 LDLRAP1Q5SW96 308 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms