RNA–Protein interactions for RNA: ENST00000529945.2

PDE4DIP-227, Transcript of phosphodiesterase 4D interacting protein, humanhuman

TSL 1 (best) BASIC

Gene PDE4DIP, Length 8,824 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4DIP-227ENST00000529945 OMDQ99983 421 aa12.46□□□□□ -0.42
PDE4DIP-227ENST00000529945 ASTN2O75129 1339 aaPredicted RBP12.46□□□□□ -0.42
PDE4DIP-227ENST00000529945 GKN3PP0CG01 181 aa12.46□□□□□ -0.42
PDE4DIP-227ENST00000529945 KELP23276 732 aa12.46□□□□□ -0.42
PDE4DIP-227ENST00000529945 POLR2JP52435 117 aaKnown RBP12.46□□□□□ -0.42
PDE4DIP-227ENST00000529945 CNKSR3Q6P9H4 555 aa12.46□□□□□ -0.42
PDE4DIP-227ENST00000529945 C16orf86Q6ZW13 317 aa12.46□□□□□ -0.42
PDE4DIP-227ENST00000529945 PSD4Q8NDX1 1056 aa12.46□□□□□ -0.42
PDE4DIP-227ENST00000529945 SH3RF3Q8TEJ3 882 aaPredicted RBP12.46□□□□□ -0.42
PDE4DIP-227ENST00000529945 NUPL2O15504 423 aaKnown RBP12.46□□□□□ -0.42
PDE4DIP-227ENST00000529945 COL6A1P12109 1028 aa12.46□□□□□ -0.42
PDE4DIP-227ENST00000529945 AGTR1P30556 359 aa12.46□□□□□ -0.42
PDE4DIP-227ENST00000529945 NPBWR1P48145 328 aa12.45□□□□□ -0.42
PDE4DIP-227ENST00000529945 RBM39Q14498 530 aaKnown RBP12.45□□□□□ -0.42
PDE4DIP-227ENST00000529945 ABRAXAS2Q15018 415 aa12.45□□□□□ -0.42
PDE4DIP-227ENST00000529945 SEC23BQ15437 767 aa12.45□□□□□ -0.42
PDE4DIP-227ENST00000529945 MCOLN2Q8IZK6 566 aa12.45□□□□□ -0.42
PDE4DIP-227ENST00000529945 TMEM39BQ9GZU3 492 aa12.45□□□□□ -0.42
PDE4DIP-227ENST00000529945 FN3KQ9H479 309 aa12.45□□□□□ -0.42
PDE4DIP-227ENST00000529945 SH3BGRL2Q9UJC5 107 aa12.45□□□□□ -0.42
PDE4DIP-227ENST00000529945 ELOVL7A1L3X0 281 aa12.45□□□□□ -0.42
PDE4DIP-227ENST00000529945 IFNW1P05000 195 aa12.45□□□□□ -0.42
PDE4DIP-227ENST00000529945 HNRNPLP14866 589 aaKnown RBP eCLIP12.45□□□□□ -0.42
PDE4DIP-227ENST00000529945 RIDAP52758 137 aaKnown RBP12.45□□□□□ -0.42
PDE4DIP-227ENST00000529945 ACTA2P62736 377 aa12.45□□□□□ -0.42
PDE4DIP-227ENST00000529945 ACTG2P63267 376 aa12.45□□□□□ -0.42
PDE4DIP-227ENST00000529945 ACTC1P68032 377 aa12.45□□□□□ -0.42
PDE4DIP-227ENST00000529945 ACTA1P68133 377 aa12.45□□□□□ -0.42
PDE4DIP-227ENST00000529945 BCL2L1Q07817 233 aa12.45□□□□□ -0.42
PDE4DIP-227ENST00000529945 TARDBPQ13148 414 aaKnown RBP eCLIP12.45□□□□□ -0.42
PDE4DIP-227ENST00000529945 GLYATQ6IB77 296 aa12.45□□□□□ -0.42
PDE4DIP-227ENST00000529945 GRIN3AQ8TCU5 1115 aa12.45□□□□□ -0.42
PDE4DIP-227ENST00000529945 PHOX2BQ99453 314 aa12.45□□□□□ -0.42
PDE4DIP-227ENST00000529945 MRI1Q9BV20 369 aa12.45□□□□□ -0.42
PDE4DIP-227ENST00000529945 SNX3O60493 162 aa12.45□□□□□ -0.42
PDE4DIP-227ENST00000529945 SLC19A2O60779 497 aa12.45□□□□□ -0.42
PDE4DIP-227ENST00000529945 RAB36O95755 333 aa12.45□□□□□ -0.42
PDE4DIP-227ENST00000529945 IGSF6O95976 241 aa12.45□□□□□ -0.42
PDE4DIP-227ENST00000529945 IL32P24001 234 aa12.45□□□□□ -0.42
PDE4DIP-227ENST00000529945 RBMXP38159 391 aaKnown RBP12.45□□□□□ -0.42
PDE4DIP-227ENST00000529945 PRPF38BQ5VTL8 546 aaKnown RBP12.45□□□□□ -0.42
PDE4DIP-227ENST00000529945 MLIPQ5VWP3 458 aa12.45□□□□□ -0.42
PDE4DIP-227ENST00000529945 KCNT2Q6UVM3 1135 aa12.45□□□□□ -0.42
PDE4DIP-227ENST00000529945 VSTM1Q6UX27 236 aa12.45□□□□□ -0.42
PDE4DIP-227ENST00000529945 GTPBP8Q8N3Z3 284 aaPredicted RBP12.45□□□□□ -0.42
PDE4DIP-227ENST00000529945 KCT2Q8NC54 265 aa12.45□□□□□ -0.42
PDE4DIP-227ENST00000529945 RCBTB1Q8NDN9 531 aa12.45□□□□□ -0.42
PDE4DIP-227ENST00000529945 PPIL3Q9H2H8 161 aaKnown RBP12.45□□□□□ -0.42
PDE4DIP-227ENST00000529945 ZDHHC6Q9H6R6 413 aa12.45□□□□□ -0.42
PDE4DIP-227ENST00000529945 SPG21Q9NZD8 308 aa12.45□□□□□ -0.42
PDE4DIP-227ENST00000529945 ADAM10O14672 748 aa12.45□□□□□ -0.42
PDE4DIP-227ENST00000529945 MTX2O75431 263 aa12.45□□□□□ -0.42
PDE4DIP-227ENST00000529945 FCER1GP30273 86 aa12.45□□□□□ -0.42
PDE4DIP-227ENST00000529945 CDH8P55286 799 aa12.45□□□□□ -0.42
PDE4DIP-227ENST00000529945 ODF4Q2M2E3 257 aa12.45□□□□□ -0.42
PDE4DIP-227ENST00000529945 HIST2H3PS2Q5TEC6 136 aa12.45□□□□□ -0.42
PDE4DIP-227ENST00000529945 SLC39A4Q6P5W5 647 aa12.45□□□□□ -0.42
PDE4DIP-227ENST00000529945 ZCCHC9Q8N567 271 aaKnown RBP12.45□□□□□ -0.42
PDE4DIP-227ENST00000529945 ALPK1Q96QP1 1244 aa12.45□□□□□ -0.42
PDE4DIP-227ENST00000529945 MTIF3Q9H2K0 278 aaKnown RBP12.45□□□□□ -0.42
PDE4DIP-227ENST00000529945 RPP14O95059 124 aaKnown RBP12.45□□□□□ -0.42
PDE4DIP-227ENST00000529945 ZACNQ401N2 412 aa12.45□□□□□ -0.42
PDE4DIP-227ENST00000529945 CHST9Q7L1S5 443 aa12.45□□□□□ -0.42
PDE4DIP-227ENST00000529945 BOLLQ8N9W6 283 aaKnown RBP12.45□□□□□ -0.42
PDE4DIP-227ENST00000529945 TMEM185AQ8NFB2 350 aa12.45□□□□□ -0.42
PDE4DIP-227ENST00000529945 ADAMTS15Q8TE58 950 aa12.45□□□□□ -0.42
PDE4DIP-227ENST00000529945 BEST1O76090 585 aa12.45□□□□□ -0.42
PDE4DIP-227ENST00000529945 SUPT20HL2P0C7V6 817 aa12.45□□□□□ -0.42
PDE4DIP-227ENST00000529945 GK5Q6ZS86 529 aa12.45□□□□□ -0.42
PDE4DIP-227ENST00000529945 USP49Q70CQ1 688 aa12.45□□□□□ -0.42
PDE4DIP-227ENST00000529945 C12orf40Q86WS4 652 aa12.45□□□□□ -0.42
PDE4DIP-227ENST00000529945 PTGR2Q8N8N7 351 aaPredicted RBP12.45□□□□□ -0.42
PDE4DIP-227ENST00000529945 SUMF2Q8NBJ7 301 aa12.45□□□□□ -0.42
PDE4DIP-227ENST00000529945 RAET1EQ8TD07 263 aa12.45□□□□□ -0.42
PDE4DIP-227ENST00000529945 MAP2K7O14733 419 aa12.45□□□□□ -0.42
PDE4DIP-227ENST00000529945 XRCC1P18887 633 aaPredicted RBP12.45□□□□□ -0.42
PDE4DIP-227ENST00000529945 HNRNPKP61978 463 aaKnown RBP eCLIP12.45□□□□□ -0.42
PDE4DIP-227ENST00000529945 CHIT1Q13231 466 aa12.45□□□□□ -0.42
PDE4DIP-227ENST00000529945 CPSF6Q16630 551 aaKnown RBP eCLIP12.45□□□□□ -0.42
PDE4DIP-227ENST00000529945 XKR3Q5GH77 459 aa12.45□□□□□ -0.42
PDE4DIP-227ENST00000529945 CLEC12AQ5QGZ9 265 aa12.45□□□□□ -0.42
PDE4DIP-227ENST00000529945 FBXL19Q6PCT2 694 aa12.45□□□□□ -0.42
PDE4DIP-227ENST00000529945 ZNF527Q8NB42 609 aa12.45□□□□□ -0.42
PDE4DIP-227ENST00000529945 KCNN1Q92952 543 aa12.45□□□□□ -0.42
PDE4DIP-227ENST00000529945 MOAP1Q96BY2 351 aa12.45□□□□□ -0.42
PDE4DIP-227ENST00000529945 KLK14Q9P0G3 267 aa12.45□□□□□ -0.42
PDE4DIP-227ENST00000529945 ANKUB1A6NFN9 424 aa12.44□□□□□ -0.42
PDE4DIP-227ENST00000529945 hCG_2039718K7EN88 272 aa12.44□□□□□ -0.42
PDE4DIP-227ENST00000529945 CDK2P24941 298 aa12.44□□□□□ -0.42
PDE4DIP-227ENST00000529945 TTPAP49638 278 aa12.44□□□□□ -0.42
PDE4DIP-227ENST00000529945 STXBP5Q5T5C0 1151 aa12.44□□□□□ -0.42
PDE4DIP-227ENST00000529945 EFCAB12Q6NXP0 572 aa12.44□□□□□ -0.42
PDE4DIP-227ENST00000529945 OR6Q1Q8NGQ2 317 aa12.44□□□□□ -0.42
PDE4DIP-227ENST00000529945 XAGE5Q8WWM1 108 aa12.44□□□□□ -0.42
PDE4DIP-227ENST00000529945 RBCK1Q9BYM8 510 aa12.44□□□□□ -0.42
PDE4DIP-227ENST00000529945 GDF3Q9NR23 364 aa12.44□□□□□ -0.42
PDE4DIP-227ENST00000529945 GPATCH2LQ9NWQ4 482 aa12.44□□□□□ -0.42
PDE4DIP-227ENST00000529945 TESMINQ9Y4I5 508 aa12.44□□□□□ -0.42
PDE4DIP-227ENST00000529945 CLUHO75153 1309 aa12.44□□□□□ -0.42
PDE4DIP-227ENST00000529945 B3GAT3O94766 335 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms