RNA–Protein interactions for RNA: ENST00000529265.5

BEST1-206, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 1,421 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-206ENST00000529265 SPRED1Q7Z699 444 aa13.51□□□□□ -0.25
BEST1-206ENST00000529265 AMIGO1Q86WK6 493 aa13.51□□□□□ -0.25
BEST1-206ENST00000529265 SRRM1Q8IYB3 904 aaKnown RBP13.51□□□□□ -0.25
BEST1-206ENST00000529265 CENPLQ8N0S6 344 aaPredicted RBP13.51□□□□□ -0.25
BEST1-206ENST00000529265 PLD6Q8N2A8 252 aaKnown RBP13.51□□□□□ -0.25
BEST1-206ENST00000529265 STAG3L4Q8TBR4 150 aa13.51□□□□□ -0.25
BEST1-206ENST00000529265 EXT2Q93063 718 aa13.51□□□□□ -0.25
BEST1-206ENST00000529265 PKP4Q99569 1192 aa13.51□□□□□ -0.25
BEST1-206ENST00000529265 RAB11FIP5Q9BXF6 653 aa13.51□□□□□ -0.25
BEST1-206ENST00000529265 TFB2MQ9H5Q4 396 aaKnown RBP13.51□□□□□ -0.25
BEST1-206ENST00000529265 ALG9Q9H6U8 611 aa13.51□□□□□ -0.25
BEST1-206ENST00000529265 ARL15Q9NXU5 204 aa13.51□□□□□ -0.25
BEST1-206ENST00000529265 IKZF3Q9UKT9 509 aa13.51□□□□□ -0.25
BEST1-206ENST00000529265 RNF112Q9ULX5 631 aa13.51□□□□□ -0.25
BEST1-206ENST00000529265 PDE10AQ9Y233 779 aa13.51□□□□□ -0.25
BEST1-206ENST00000529265 KRT87PA6NCN2 255 aa13.5□□□□□ -0.25
BEST1-206ENST00000529265 OR6C74A6NCV1 312 aa13.5□□□□□ -0.25
BEST1-206ENST00000529265 B4GAT1O43505 415 aa13.5□□□□□ -0.25
BEST1-206ENST00000529265 DUX1O43812 170 aa13.5□□□□□ -0.25
BEST1-206ENST00000529265 S100BP04271 92 aaPredicted RBP13.5□□□□□ -0.25
BEST1-206ENST00000529265 RPLP0P05388 317 aaKnown RBP13.5□□□□□ -0.25
BEST1-206ENST00000529265 PROS1P07225 676 aa13.5□□□□□ -0.25
BEST1-206ENST00000529265 KRT4P19013 534 aa13.5□□□□□ -0.25
BEST1-206ENST00000529265 RAB28P51157 221 aa13.5□□□□□ -0.25
BEST1-206ENST00000529265 CCL7P80098 99 aa13.5□□□□□ -0.25
BEST1-206ENST00000529265 GPLD1P80108 840 aa13.5□□□□□ -0.25
BEST1-206ENST00000529265 SIM1P81133 766 aaPredicted RBP13.5□□□□□ -0.25
BEST1-206ENST00000529265 E2F1Q01094 437 aa13.5□□□□□ -0.25
BEST1-206ENST00000529265 PRKAA1Q13131 559 aa13.5□□□□□ -0.25
BEST1-206ENST00000529265 ILKQ13418 452 aa13.5□□□□□ -0.25
BEST1-206ENST00000529265 TSTA3Q13630 321 aaPredicted RBP13.5□□□□□ -0.25
BEST1-206ENST00000529265 NR1D2Q14995 579 aa13.5□□□□□ -0.25
BEST1-206ENST00000529265 ACAP2Q15057 778 aa13.5□□□□□ -0.25
BEST1-206ENST00000529265 PHKG1Q16816 387 aa13.5□□□□□ -0.25
BEST1-206ENST00000529265 NKAIN2Q5VXU1 208 aa13.5□□□□□ -0.25
BEST1-206ENST00000529265 SBSNQ6UWP8 590 aa13.5□□□□□ -0.25
BEST1-206ENST00000529265 GLRX5Q86SX6 157 aa13.5□□□□□ -0.25
BEST1-206ENST00000529265 TRABD2AQ86V40 505 aa13.5□□□□□ -0.25
BEST1-206ENST00000529265 OOSP2Q86WS3 158 aa13.5□□□□□ -0.25
BEST1-206ENST00000529265 GPSM1Q86YR5 675 aa13.5□□□□□ -0.25
BEST1-206ENST00000529265 C4orf33Q8N1A6 199 aa13.5□□□□□ -0.25
BEST1-206ENST00000529265 FBXO15Q8NCQ5 510 aaPredicted RBP13.5□□□□□ -0.25
BEST1-206ENST00000529265 NCSTNQ92542 709 aa13.5□□□□□ -0.25
BEST1-206ENST00000529265 DLG3Q92796 817 aa13.5□□□□□ -0.25
BEST1-206ENST00000529265 KIAA1191Q96A73 305 aa13.5□□□□□ -0.25
BEST1-206ENST00000529265 PTERQ96BW5 349 aa13.5□□□□□ -0.25
BEST1-206ENST00000529265 CCDC138Q96M89 665 aa13.5□□□□□ -0.25
BEST1-206ENST00000529265 IL17FQ96PD4 163 aa13.5□□□□□ -0.25
BEST1-206ENST00000529265 EGFL8Q99944 293 aa13.5□□□□□ -0.25
BEST1-206ENST00000529265 STMN4Q9H169 189 aaPredicted RBP13.5□□□□□ -0.25
BEST1-206ENST00000529265 LRRN3Q9H3W5 708 aa13.5□□□□□ -0.25
BEST1-206ENST00000529265 EPB41L1Q9H4G0 881 aa13.5□□□□□ -0.25
BEST1-206ENST00000529265 ZNF358Q9NW07 568 aa13.5□□□□□ -0.25
BEST1-206ENST00000529265 SPATA7Q9P0W8 599 aa13.5□□□□□ -0.25
BEST1-206ENST00000529265 DCDC2Q9UHG0 476 aa13.5□□□□□ -0.25
BEST1-206ENST00000529265 NOVA2Q9UNW9 492 aaKnown RBP13.5□□□□□ -0.25
BEST1-206ENST00000529265 ICKQ9UPZ9 632 aa13.5□□□□□ -0.25
BEST1-206ENST00000529265 PIEZO1Q92508 2521 aa13.5□□□□□ -0.25
BEST1-206ENST00000529265 IGHV1OR21-1A0A087WYE8 117 aa13.49□□□□□ -0.25
BEST1-206ENST00000529265 GSAPA4D1B5 854 aa13.49□□□□□ -0.25
BEST1-206ENST00000529265 NCF1BA6NI72 391 aaPredicted RBP13.49□□□□□ -0.25
BEST1-206ENST00000529265 ZNF839A8K0R7 811 aa13.49□□□□□ -0.25
BEST1-206ENST00000529265 NCF1CA8MVU1 366 aaPredicted RBP13.49□□□□□ -0.25
BEST1-206ENST00000529265 MYO1CO00159 1063 aa13.49□□□□□ -0.25
BEST1-206ENST00000529265 COPEO14579 308 aa13.49□□□□□ -0.25
BEST1-206ENST00000529265 ANXA5P08758 320 aa13.49□□□□□ -0.25
BEST1-206ENST00000529265 RBP1P09455 135 aa13.49□□□□□ -0.25
BEST1-206ENST00000529265 NCF1P14598 390 aaPredicted RBP13.49□□□□□ -0.25
BEST1-206ENST00000529265 CCT5P48643 541 aa13.49□□□□□ -0.25
BEST1-206ENST00000529265 AP1S2P56377 157 aa13.49□□□□□ -0.25
BEST1-206ENST00000529265 GRB7Q14451 532 aa13.49□□□□□ -0.25
BEST1-206ENST00000529265 OR4D1Q15615 310 aa13.49□□□□□ -0.25
BEST1-206ENST00000529265 USP53Q70EK8 1073 aa13.49□□□□□ -0.25
BEST1-206ENST00000529265 ISCA2Q86U28 154 aa13.49□□□□□ -0.25
BEST1-206ENST00000529265 SYTL1Q8IYJ3 562 aa13.49□□□□□ -0.25
BEST1-206ENST00000529265 C2orf73Q8N5S3 287 aaPredicted RBP13.49□□□□□ -0.25
BEST1-206ENST00000529265 GOLGA6L1Q8N7Z2 621 aa13.49□□□□□ -0.25
BEST1-206ENST00000529265 GFM1Q96RP9 751 aaKnown RBP13.49□□□□□ -0.25
BEST1-206ENST00000529265 SMC6Q96SB8 1091 aa13.49□□□□□ -0.25
BEST1-206ENST00000529265 NRTNQ99748 197 aa13.49□□□□□ -0.25
BEST1-206ENST00000529265 IQCGQ9H095 443 aaKnown RBP13.49□□□□□ -0.25
BEST1-206ENST00000529265 ACBD3Q9H3P7 528 aa13.49□□□□□ -0.25
BEST1-206ENST00000529265 VIPAS39Q9H9C1 493 aa13.49□□□□□ -0.25
BEST1-206ENST00000529265 HRASLS2Q9NWW9 162 aa13.49□□□□□ -0.25
BEST1-206ENST00000529265 CD274Q9NZQ7 290 aa13.49□□□□□ -0.25
BEST1-206ENST00000529265 APOBEC2Q9Y235 224 aaKnown RBP13.49□□□□□ -0.25
BEST1-206ENST00000529265 OARD1Q9Y530 152 aa13.49□□□□□ -0.25
BEST1-206ENST00000529265 PCDHGA1Q9Y5H4 931 aa13.49□□□□□ -0.25
BEST1-206ENST00000529265 SNRNP200O75643 2136 aaKnown RBP13.49□□□□□ -0.25
BEST1-206ENST00000529265 DCDC2BA2VCK2 349 aa13.48□□□□□ -0.25
BEST1-206ENST00000529265 FAM221BA6H8Z2 402 aa13.48□□□□□ -0.25
BEST1-206ENST00000529265 SYCE1LA8MT33 242 aa13.48□□□□□ -0.25
BEST1-206ENST00000529265 SUPT3HB4E1H0 165 aa13.48□□□□□ -0.25
BEST1-206ENST00000529265 GIPC1O14908 333 aa13.48□□□□□ -0.25
BEST1-206ENST00000529265 KERAO60938 352 aa13.48□□□□□ -0.25
BEST1-206ENST00000529265 GLRA3O75311 464 aa13.48□□□□□ -0.25
BEST1-206ENST00000529265 SUPT3HO75486 399 aa13.48□□□□□ -0.25
BEST1-206ENST00000529265 KCNK5O95279 499 aa13.48□□□□□ -0.25
BEST1-206ENST00000529265 TOP3BO95985 862 aaKnown RBP13.48□□□□□ -0.25
BEST1-206ENST00000529265 GSTA1P08263 222 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms