RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 FXYD1O00168 92 aa14.4□□□□□ -0.1
ECHDC1-220ENST00000528402 ANKRD28O15084 1053 aa14.4□□□□□ -0.1
ECHDC1-220ENST00000528402 TSPAN6O43657 245 aa14.4□□□□□ -0.1
ECHDC1-220ENST00000528402 AP1G1O43747 822 aa14.4□□□□□ -0.1
ECHDC1-220ENST00000528402 RNASEH1O60930 286 aaKnown RBP14.4□□□□□ -0.1
ECHDC1-220ENST00000528402 SEC22BO75396 215 aa14.4□□□□□ -0.1
ECHDC1-220ENST00000528402 UMPSP11172 480 aa14.4□□□□□ -0.1
ECHDC1-220ENST00000528402 C6P13671 934 aa14.4□□□□□ -0.1
ECHDC1-220ENST00000528402 HLA-EP13747 358 aa14.4□□□□□ -0.1
ECHDC1-220ENST00000528402 HSD3B1P14060 373 aa14.4□□□□□ -0.1
ECHDC1-220ENST00000528402 TCN1P20061 433 aaPredicted RBP14.4□□□□□ -0.1
ECHDC1-220ENST00000528402 HSD3B2P26439 372 aa14.4□□□□□ -0.1
ECHDC1-220ENST00000528402 VARSP26640 1264 aaKnown RBP14.4□□□□□ -0.1
ECHDC1-220ENST00000528402 HNF4AP41235 474 aa14.4□□□□□ -0.1
ECHDC1-220ENST00000528402 HSPA13P48723 471 aa14.4□□□□□ -0.1
ECHDC1-220ENST00000528402 RFTN2Q52LD8 501 aaPredicted RBP14.4□□□□□ -0.1
ECHDC1-220ENST00000528402 CES5AQ6NT32 575 aa14.4□□□□□ -0.1
ECHDC1-220ENST00000528402 PROSER1Q86XN7 944 aa14.4□□□□□ -0.1
ECHDC1-220ENST00000528402 APLFQ8IW19 511 aaPredicted RBP14.4□□□□□ -0.1
ECHDC1-220ENST00000528402 RGL4Q8IZJ4 473 aa14.4□□□□□ -0.1
ECHDC1-220ENST00000528402 ICA1LQ8NDH6 482 aa14.4□□□□□ -0.1
ECHDC1-220ENST00000528402 OR2T34Q8NGX1 318 aa14.4□□□□□ -0.1
ECHDC1-220ENST00000528402 OR2T3Q8NH03 318 aa14.4□□□□□ -0.1
ECHDC1-220ENST00000528402 TMEM125Q96AQ2 219 aa14.4□□□□□ -0.1
ECHDC1-220ENST00000528402 WRAP53Q9BUR4 548 aaKnown RBP14.4□□□□□ -0.1
ECHDC1-220ENST00000528402 OSBPL6Q9BZF3 934 aa14.4□□□□□ -0.1
ECHDC1-220ENST00000528402 DPY30Q9C005 99 aa14.4□□□□□ -0.1
ECHDC1-220ENST00000528402 DPEP2Q9H4A9 486 aa14.4□□□□□ -0.1
ECHDC1-220ENST00000528402 IGFLR1Q9H665 355 aa14.4□□□□□ -0.1
ECHDC1-220ENST00000528402 PRSS16Q9NQE7 514 aa14.4□□□□□ -0.1
ECHDC1-220ENST00000528402 ARMC1Q9NVT9 282 aa14.4□□□□□ -0.1
ECHDC1-220ENST00000528402 MAPRE3Q9UPY8 281 aa14.4□□□□□ -0.1
ECHDC1-220ENST00000528402 PRRC2BQ5JSZ5 2229 aaKnown RBP14.39□□□□□ -0.11
ECHDC1-220ENST00000528402 H3BM21 787 aa14.39□□□□□ -0.11
ECHDC1-220ENST00000528402 NME4O00746 187 aa14.39□□□□□ -0.11
ECHDC1-220ENST00000528402 CLGNO14967 610 aa14.39□□□□□ -0.11
ECHDC1-220ENST00000528402 SPINT1O43278 529 aa14.39□□□□□ -0.11
ECHDC1-220ENST00000528402 EPHX1P07099 455 aa14.39□□□□□ -0.11
ECHDC1-220ENST00000528402 EPORP19235 508 aa14.39□□□□□ -0.11
ECHDC1-220ENST00000528402 TEAD1P28347 426 aa14.39□□□□□ -0.11
ECHDC1-220ENST00000528402 HTR1EP28566 365 aa14.39□□□□□ -0.11
ECHDC1-220ENST00000528402 IL12AP29459 219 aa14.39□□□□□ -0.11
ECHDC1-220ENST00000528402 PBX2P40425 430 aa14.39□□□□□ -0.11
ECHDC1-220ENST00000528402 CASP2P42575 452 aa14.39□□□□□ -0.11
ECHDC1-220ENST00000528402 TNFRSF4P43489 277 aa14.39□□□□□ -0.11
ECHDC1-220ENST00000528402 ERFP50548 548 aa14.39□□□□□ -0.11
ECHDC1-220ENST00000528402 CLCN2P51788 898 aa14.39□□□□□ -0.11
ECHDC1-220ENST00000528402 HNRNPFP52597 415 aaKnown RBP14.39□□□□□ -0.11
ECHDC1-220ENST00000528402 CTSCP53634 463 aa14.39□□□□□ -0.11
ECHDC1-220ENST00000528402 PFN3P60673 137 aa14.39□□□□□ -0.11
ECHDC1-220ENST00000528402 RPL38P63173 70 aaKnown RBP14.39□□□□□ -0.11
ECHDC1-220ENST00000528402 ABRQ12979 859 aa14.39□□□□□ -0.11
ECHDC1-220ENST00000528402 CSTF3Q12996 717 aaKnown RBP14.39□□□□□ -0.11
ECHDC1-220ENST00000528402 PWP1Q13610 501 aa14.39□□□□□ -0.11
ECHDC1-220ENST00000528402 ENPP2Q13822 863 aa14.39□□□□□ -0.11
ECHDC1-220ENST00000528402 ITPRIPL2Q3MIP1 535 aa14.39□□□□□ -0.11
ECHDC1-220ENST00000528402 POM121L1PQ3SYA9 428 aa14.39□□□□□ -0.11
ECHDC1-220ENST00000528402 RAET1GQ6H3X3 334 aa14.39□□□□□ -0.11
ECHDC1-220ENST00000528402 LCN8Q6JVE9 175 aa14.39□□□□□ -0.11
ECHDC1-220ENST00000528402 SYCE2Q6PIF2 218 aa14.39□□□□□ -0.11
ECHDC1-220ENST00000528402 ADAMTSL4Q6UY14 1074 aa14.39□□□□□ -0.11
ECHDC1-220ENST00000528402 MBOAT1Q6ZNC8 495 aa14.39□□□□□ -0.11
ECHDC1-220ENST00000528402 PTRH1Q86Y79 214 aaKnown RBP14.39□□□□□ -0.11
ECHDC1-220ENST00000528402 TEX37Q96LM6 180 aa14.39□□□□□ -0.11
ECHDC1-220ENST00000528402 UHRF1Q96T88 793 aaPredicted RBP14.39□□□□□ -0.11
ECHDC1-220ENST00000528402 Q9H521 79 aa14.39□□□□□ -0.11
ECHDC1-220ENST00000528402 CMTM6Q9NX76 183 aa14.39□□□□□ -0.11
ECHDC1-220ENST00000528402 MBD1Q9UIS9 605 aaPredicted RBP14.39□□□□□ -0.11
ECHDC1-220ENST00000528402 SLC22A14Q9Y267 594 aa14.39□□□□□ -0.11
ECHDC1-220ENST00000528402 FADS3Q9Y5Q0 445 aa14.39□□□□□ -0.11
ECHDC1-220ENST00000528402 LRRK1Q38SD2 2015 aa14.38□□□□□ -0.11
ECHDC1-220ENST00000528402 ARHGEF33A8MVX0 844 aa14.38□□□□□ -0.11
ECHDC1-220ENST00000528402 FFAR3O14843 346 aa14.38□□□□□ -0.11
ECHDC1-220ENST00000528402 GPR42O15529 346 aa14.38□□□□□ -0.11
ECHDC1-220ENST00000528402 HNRNPRO43390 633 aaKnown RBP14.38□□□□□ -0.11
ECHDC1-220ENST00000528402 MMP20O60882 483 aa14.38□□□□□ -0.11
ECHDC1-220ENST00000528402 ADH1BP00325 375 aa14.38□□□□□ -0.11
ECHDC1-220ENST00000528402 SOD1P00441 154 aa14.38□□□□□ -0.11
ECHDC1-220ENST00000528402 PDYNP01213 254 aa14.38□□□□□ -0.11
ECHDC1-220ENST00000528402 IL10P22301 178 aa14.38□□□□□ -0.11
ECHDC1-220ENST00000528402 MSX2P35548 267 aaPredicted RBP14.38□□□□□ -0.11
ECHDC1-220ENST00000528402 IL12RB1P42701 662 aa14.38□□□□□ -0.11
ECHDC1-220ENST00000528402 CLDN8P56748 225 aa14.38□□□□□ -0.11
ECHDC1-220ENST00000528402 IRF8Q02556 426 aa14.38□□□□□ -0.11
ECHDC1-220ENST00000528402 RPA4Q13156 261 aa14.38□□□□□ -0.11
ECHDC1-220ENST00000528402 BLMHQ13867 455 aa14.38□□□□□ -0.11
ECHDC1-220ENST00000528402 AGERQ15109 404 aa14.38□□□□□ -0.11
ECHDC1-220ENST00000528402 CPSF6Q16630 551 aaKnown RBP eCLIP14.38□□□□□ -0.11
ECHDC1-220ENST00000528402 ZNF658BQ4V348 819 aaPredicted RBP14.38□□□□□ -0.11
ECHDC1-220ENST00000528402 C6orf10Q5SRN2 563 aa14.38□□□□□ -0.11
ECHDC1-220ENST00000528402 FRG2Q64ET8 278 aa14.38□□□□□ -0.11
ECHDC1-220ENST00000528402 NEK5Q6P3R8 708 aa14.38□□□□□ -0.11
ECHDC1-220ENST00000528402 AGTRAPQ6RW13 159 aa14.38□□□□□ -0.11
ECHDC1-220ENST00000528402 MSANTD1Q6ZTZ1 278 aa14.38□□□□□ -0.11
ECHDC1-220ENST00000528402 THOC6Q86W42 341 aaKnown RBP14.38□□□□□ -0.11
ECHDC1-220ENST00000528402 BEND7Q8N7W2 519 aaPredicted RBP14.38□□□□□ -0.11
ECHDC1-220ENST00000528402 TNIP2Q8NFZ5 429 aa14.38□□□□□ -0.11
ECHDC1-220ENST00000528402 OR8J3Q8NGG0 315 aa14.38□□□□□ -0.11
ECHDC1-220ENST00000528402 OR56A3Q8NH54 315 aa14.38□□□□□ -0.11
ECHDC1-220ENST00000528402 N4BP2L2Q92802 583 aaPredicted RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms