RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 RFLNAQ6ZTI6 216 aa14.99□□□□□ -0.01
USH1C-207ENST00000527720 Q6ZVU0 165 aa14.99□□□□□ -0.01
USH1C-207ENST00000527720 KLHL23Q8NBE8 558 aa14.99□□□□□ -0.01
USH1C-207ENST00000527720 OR2A12Q8NGT7 310 aa14.99□□□□□ -0.01
USH1C-207ENST00000527720 SLC22A17Q8WUG5 538 aa14.99□□□□□ -0.01
USH1C-207ENST00000527720 CLP1Q92989 425 aaKnown RBP14.99□□□□□ -0.01
USH1C-207ENST00000527720 SEPHS2Q99611 448 aa14.99□□□□□ -0.01
USH1C-207ENST00000527720 UGT2B28Q9BY64 529 aa14.99□□□□□ -0.01
USH1C-207ENST00000527720 ACPTQ9BZG2 426 aa14.99□□□□□ -0.01
USH1C-207ENST00000527720 PIF1Q9H611 641 aa14.99□□□□□ -0.01
USH1C-207ENST00000527720 SPHK2Q9NRA0 654 aa14.99□□□□□ -0.01
USH1C-207ENST00000527720 TBC1D14Q9P2M4 693 aa14.99□□□□□ -0.01
USH1C-207ENST00000527720 TRIM64A6NGJ6 449 aa14.98□□□□□ -0.01
USH1C-207ENST00000527720 QSOX1O00391 747 aa14.98□□□□□ -0.01
USH1C-207ENST00000527720 DFNA5O60443 496 aa14.98□□□□□ -0.01
USH1C-207ENST00000527720 ERN1O75460 977 aaKnown RBP14.98□□□□□ -0.01
USH1C-207ENST00000527720 PDYNP01213 254 aa14.98□□□□□ -0.01
USH1C-207ENST00000527720 HOXB6P17509 224 aaKnown RBP14.98□□□□□ -0.01
USH1C-207ENST00000527720 RPS14P62263 151 aaKnown RBP14.98□□□□□ -0.01
USH1C-207ENST00000527720 HTRA4P83105 476 aaPredicted RBP14.98□□□□□ -0.01
USH1C-207ENST00000527720 CHRNB3Q05901 458 aa14.98□□□□□ -0.01
USH1C-207ENST00000527720 ZNF33BQ06732 778 aa14.98□□□□□ -0.01
USH1C-207ENST00000527720 CPSF6Q16630 551 aaKnown RBP eCLIP14.98□□□□□ -0.01
USH1C-207ENST00000527720 AAK1Q2M2I8 961 aa14.98□□□□□ -0.01
USH1C-207ENST00000527720 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.98□□□□□ -0.01
USH1C-207ENST00000527720 RUNDC3AQ59EK9 446 aa14.98□□□□□ -0.01
USH1C-207ENST00000527720 SGO1Q5FBB7 561 aa14.98□□□□□ -0.01
USH1C-207ENST00000527720 SPANXN4Q5MJ08 99 aa14.98□□□□□ -0.01
USH1C-207ENST00000527720 SUSD1Q6UWL2 747 aa14.98□□□□□ -0.01
USH1C-207ENST00000527720 KIAA0907Q7Z7F0 614 aaPredicted RBP14.98□□□□□ -0.01
USH1C-207ENST00000527720 ADIPOR2Q86V24 386 aa14.98□□□□□ -0.01
USH1C-207ENST00000527720 DHRSXQ8N5I4 330 aa14.98□□□□□ -0.01
USH1C-207ENST00000527720 CHST14Q8NCH0 376 aa14.98□□□□□ -0.01
USH1C-207ENST00000527720 ZNF548Q8NEK5 533 aaPredicted RBP14.98□□□□□ -0.01
USH1C-207ENST00000527720 MCOLN3Q8TDD5 553 aa14.98□□□□□ -0.01
USH1C-207ENST00000527720 SELENOMQ8WWX9 145 aa14.98□□□□□ -0.01
USH1C-207ENST00000527720 TIFAQ96CG3 184 aa14.98□□□□□ -0.01
USH1C-207ENST00000527720 ELOVL6Q9H5J4 265 aa14.98□□□□□ -0.01
USH1C-207ENST00000527720 TDP1Q9NUW8 608 aa14.98□□□□□ -0.01
USH1C-207ENST00000527720 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.98□□□□□ -0.01
USH1C-207ENST00000527720 MAN2B2Q9Y2E5 1009 aa14.98□□□□□ -0.01
USH1C-207ENST00000527720 NOTCH4Q99466 2003 aa14.98□□□□□ -0.01
USH1C-207ENST00000527720 TSPAN11A1L157 253 aa14.97□□□□□ -0.01
USH1C-207ENST00000527720 KIAA0355O15063 1070 aa14.97□□□□□ -0.01
USH1C-207ENST00000527720 TYRP14679 529 aa14.97□□□□□ -0.01
USH1C-207ENST00000527720 ETS2P15036 469 aa14.97□□□□□ -0.01
USH1C-207ENST00000527720 CAPGP40121 348 aa14.97□□□□□ -0.01
USH1C-207ENST00000527720 HNRNPFP52597 415 aaKnown RBP14.97□□□□□ -0.01
USH1C-207ENST00000527720 KCNC3Q14003 757 aa14.97□□□□□ -0.01
USH1C-207ENST00000527720 ATG9BQ674R7 924 aa14.97□□□□□ -0.01
USH1C-207ENST00000527720 TTC33Q6PID6 262 aaPredicted RBP14.97□□□□□ -0.01
USH1C-207ENST00000527720 NMD3Q96D46 503 aaKnown RBP14.97□□□□□ -0.01
USH1C-207ENST00000527720 CMTM7Q96FZ5 175 aa14.97□□□□□ -0.01
USH1C-207ENST00000527720 VPS50Q96JG6 964 aa14.97□□□□□ -0.01
USH1C-207ENST00000527720 OR52E6Q96RD3 313 aa14.97□□□□□ -0.01
USH1C-207ENST00000527720 HEPHQ9BQS7 1158 aa14.97□□□□□ -0.01
USH1C-207ENST00000527720 FAM83DQ9H4H8 585 aa14.97□□□□□ -0.01
USH1C-207ENST00000527720 HCFC1R1Q9NWW0 138 aa14.97□□□□□ -0.01
USH1C-207ENST00000527720 A0A087WXM4 84 aa14.97□□□□□ -0.01
USH1C-207ENST00000527720 TRBV5-3A0A0A0MS03 114 aa14.97□□□□□ -0.01
USH1C-207ENST00000527720 H0YAE9 185 aa14.97□□□□□ -0.01
USH1C-207ENST00000527720 GSTA4O15217 222 aa14.97□□□□□ -0.01
USH1C-207ENST00000527720 SCELO95171 688 aa14.97□□□□□ -0.01
USH1C-207ENST00000527720 PTPN2P17706 415 aa14.97□□□□□ -0.01
USH1C-207ENST00000527720 LRIF1Q5T3J3 769 aa14.97□□□□□ -0.01
USH1C-207ENST00000527720 MSANTD1Q6ZTZ1 278 aa14.97□□□□□ -0.01
USH1C-207ENST00000527720 RASGRP3Q8IV61 690 aa14.97□□□□□ -0.01
USH1C-207ENST00000527720 ADAMTS16Q8TE57 1224 aa14.97□□□□□ -0.01
USH1C-207ENST00000527720 FAM83CQ9BQN1 747 aa14.97□□□□□ -0.01
USH1C-207ENST00000527720 THUMPD3Q9BV44 507 aaKnown RBP14.97□□□□□ -0.01
USH1C-207ENST00000527720 YTHDF1Q9BYJ9 559 aaKnown RBP14.97□□□□□ -0.01
USH1C-207ENST00000527720 KCNH6Q9H252 994 aa14.97□□□□□ -0.01
USH1C-207ENST00000527720 RMND5AQ9H871 391 aa14.97□□□□□ -0.01
USH1C-207ENST00000527720 ZNHIT2Q9UHR6 403 aa14.97□□□□□ -0.01
USH1C-207ENST00000527720 ERVW-1Q9UQF0 538 aa14.97□□□□□ -0.01
USH1C-207ENST00000527720 A0A1B0GTW7 788 aa14.96□□□□□ -0.01
USH1C-207ENST00000527720 TRIM43BA6NCK2 446 aa14.96□□□□□ -0.01
USH1C-207ENST00000527720 CCDC160A6NGH7 325 aa14.96□□□□□ -0.01
USH1C-207ENST00000527720 UGDHO60701 494 aa14.96□□□□□ -0.01
USH1C-207ENST00000527720 FTH1P02794 183 aa14.96□□□□□ -0.01
USH1C-207ENST00000527720 GNAO1P09471 354 aa14.96□□□□□ -0.01
USH1C-207ENST00000527720 ACRP10323 421 aa14.96□□□□□ -0.01
USH1C-207ENST00000527720 POLR2EP19388 210 aaKnown RBP14.96□□□□□ -0.01
USH1C-207ENST00000527720 CALRP27797 417 aaKnown RBP14.96□□□□□ -0.01
USH1C-207ENST00000527720 SOX11P35716 441 aa14.96□□□□□ -0.01
USH1C-207ENST00000527720 TEAD2Q15562 447 aa14.96□□□□□ -0.01
USH1C-207ENST00000527720 PTCHD3Q3KNS1 767 aa14.96□□□□□ -0.01
USH1C-207ENST00000527720 CYBRD1Q53TN4 286 aa14.96□□□□□ -0.01
USH1C-207ENST00000527720 ABRAXAS1Q6UWZ7 409 aa14.96□□□□□ -0.01
USH1C-207ENST00000527720 PATL1Q86TB9 770 aaKnown RBP14.96□□□□□ -0.01
USH1C-207ENST00000527720 TRAM1L1Q8N609 369 aa14.96□□□□□ -0.01
USH1C-207ENST00000527720 KRTCAP2Q8N6L1 136 aa14.96□□□□□ -0.01
USH1C-207ENST00000527720 NUDT8Q8WV74 236 aa14.96□□□□□ -0.01
USH1C-207ENST00000527720 SKA2Q8WVK7 121 aaPredicted RBP14.96□□□□□ -0.01
USH1C-207ENST00000527720 ASZ1Q8WWH4 475 aa14.96□□□□□ -0.01
USH1C-207ENST00000527720 TRIM43Q96BQ3 446 aaPredicted RBP14.96□□□□□ -0.01
USH1C-207ENST00000527720 TESCQ96BS2 214 aa14.96□□□□□ -0.01
USH1C-207ENST00000527720 OTUB2Q96DC9 234 aa14.96□□□□□ -0.01
USH1C-207ENST00000527720 TCF25Q9BQ70 676 aa14.96□□□□□ -0.01
USH1C-207ENST00000527720 ABCG8Q9H221 673 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms