RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 DCUN1D1Q96GG9 259 aa13.74□□□□□ -0.21
CPSF1-201ENST00000526271 PIH1D1Q9NWS0 290 aaKnown RBP13.74□□□□□ -0.21
CPSF1-201ENST00000526271 NOVA2Q9UNW9 492 aaKnown RBP13.74□□□□□ -0.21
CPSF1-201ENST00000526271 HS3ST3B1Q9Y662 390 aa13.74□□□□□ -0.21
CPSF1-201ENST00000526271 HIVEP1P15822 2718 aa13.74□□□□□ -0.21
CPSF1-201ENST00000526271 H7C0C1 242 aa13.73□□□□□ -0.21
CPSF1-201ENST00000526271 ZSCAN9O15535 394 aaPredicted RBP13.73□□□□□ -0.21
CPSF1-201ENST00000526271 PJA2O43164 708 aa13.73□□□□□ -0.21
CPSF1-201ENST00000526271 NRP2O60462 931 aa13.73□□□□□ -0.21
CPSF1-201ENST00000526271 ANXA9O76027 345 aa13.73□□□□□ -0.21
CPSF1-201ENST00000526271 METTL18O95568 372 aa13.73□□□□□ -0.21
CPSF1-201ENST00000526271 ONECUT2O95948 504 aa13.73□□□□□ -0.21
CPSF1-201ENST00000526271 PYGMP11217 842 aa13.73□□□□□ -0.21
CPSF1-201ENST00000526271 ITGALP20701 1170 aa13.73□□□□□ -0.21
CPSF1-201ENST00000526271 TNFRSF8P28908 595 aa13.73□□□□□ -0.21
CPSF1-201ENST00000526271 FOLR3P41439 243 aa13.73□□□□□ -0.21
CPSF1-201ENST00000526271 ATP5OP48047 213 aa13.73□□□□□ -0.21
CPSF1-201ENST00000526271 DCDP81605 110 aaKnown RBP13.73□□□□□ -0.21
CPSF1-201ENST00000526271 RPA4Q13156 261 aa13.73□□□□□ -0.21
CPSF1-201ENST00000526271 KRT33BQ14525 404 aa13.73□□□□□ -0.21
CPSF1-201ENST00000526271 NKAIN1Q4KMZ8 207 aa13.73□□□□□ -0.21
CPSF1-201ENST00000526271 TMTC1Q8IUR5 882 aa13.73□□□□□ -0.21
CPSF1-201ENST00000526271 TMEM139Q8IV31 216 aa13.73□□□□□ -0.21
CPSF1-201ENST00000526271 VRK3Q8IV63 474 aa13.73□□□□□ -0.21
CPSF1-201ENST00000526271 PROKR1Q8TCW9 393 aa13.73□□□□□ -0.21
CPSF1-201ENST00000526271 LKAAEAR1Q8TD35 194 aa13.73□□□□□ -0.21
CPSF1-201ENST00000526271 CDKN2AIPNLQ96HQ2 116 aa13.73□□□□□ -0.21
CPSF1-201ENST00000526271 CCDC42Q96M95 316 aa13.73□□□□□ -0.21
CPSF1-201ENST00000526271 C5orf34Q96MH7 638 aa13.73□□□□□ -0.21
CPSF1-201ENST00000526271 SPATA13Q96N96 652 aa13.73□□□□□ -0.21
CPSF1-201ENST00000526271 C19orf43Q9BQ61 176 aa13.73□□□□□ -0.21
CPSF1-201ENST00000526271 TBL1YQ9BQ87 522 aa13.73□□□□□ -0.21
CPSF1-201ENST00000526271 SYNPO2LQ9H987 977 aa13.73□□□□□ -0.21
CPSF1-201ENST00000526271 NLE1Q9NVX2 485 aaPredicted RBP13.73□□□□□ -0.21
CPSF1-201ENST00000526271 CIDEBQ9UHD4 219 aa13.73□□□□□ -0.21
CPSF1-201ENST00000526271 COPG1Q9Y678 874 aaKnown RBP13.73□□□□□ -0.21
CPSF1-201ENST00000526271 CPAMD8Q8IZJ3 1885 aa13.73□□□□□ -0.21
CPSF1-201ENST00000526271 C2CD3Q4AC94 2353 aa13.72□□□□□ -0.21
CPSF1-201ENST00000526271 A0A0J9YY10 115 aa13.72□□□□□ -0.21
CPSF1-201ENST00000526271 KRT87PA6NCN2 255 aa13.72□□□□□ -0.21
CPSF1-201ENST00000526271 AGPSO00116 658 aa13.72□□□□□ -0.21
CPSF1-201ENST00000526271 HBQ1P09105 142 aa13.72□□□□□ -0.21
CPSF1-201ENST00000526271 AGXTP21549 392 aa13.72□□□□□ -0.21
CPSF1-201ENST00000526271 FOXN2P32314 431 aa13.72□□□□□ -0.21
CPSF1-201ENST00000526271 GLRBP48167 497 aa13.72□□□□□ -0.21
CPSF1-201ENST00000526271 BRD3Q15059 726 aa13.72□□□□□ -0.21
CPSF1-201ENST00000526271 GPR33Q49SQ1 333 aa13.72□□□□□ -0.21
CPSF1-201ENST00000526271 KIRREL2Q6UWL6 708 aa13.72□□□□□ -0.21
CPSF1-201ENST00000526271 LRRC8AQ8IWT6 810 aa13.72□□□□□ -0.21
CPSF1-201ENST00000526271 SRRM1Q8IYB3 904 aaKnown RBP13.72□□□□□ -0.21
CPSF1-201ENST00000526271 CCDC170Q8IYT3 715 aa13.72□□□□□ -0.21
CPSF1-201ENST00000526271 ST6GALNAC3Q8NDV1 305 aa13.72□□□□□ -0.21
CPSF1-201ENST00000526271 ALG3Q92685 438 aa13.72□□□□□ -0.21
CPSF1-201ENST00000526271 PTERQ96BW5 349 aa13.72□□□□□ -0.21
CPSF1-201ENST00000526271 FER1L6-AS2Q96M78 137 aa13.72□□□□□ -0.21
CPSF1-201ENST00000526271 BAG1Q99933 345 aaPredicted RBP13.72□□□□□ -0.21
CPSF1-201ENST00000526271 IFT80Q9P2H3 777 aaPredicted RBP13.72□□□□□ -0.21
CPSF1-201ENST00000526271 FBXL4Q9UKA2 621 aa13.72□□□□□ -0.21
CPSF1-201ENST00000526271 PADI2Q9Y2J8 665 aa13.72□□□□□ -0.21
CPSF1-201ENST00000526271 HEATR5BQ9P2D3 2071 aa13.71□□□□□ -0.21
CPSF1-201ENST00000526271 CCDC168Q8NDH2 2452 aa13.71□□□□□ -0.21
CPSF1-201ENST00000526271 ENO4A6NNW6 628 aa13.71□□□□□ -0.21
CPSF1-201ENST00000526271 IFRD1O00458 451 aaPredicted RBP13.71□□□□□ -0.21
CPSF1-201ENST00000526271 KCNN4O15554 427 aa13.71□□□□□ -0.21
CPSF1-201ENST00000526271 OR1I1O60431 355 aa13.71□□□□□ -0.21
CPSF1-201ENST00000526271 WISP2O76076 250 aa13.71□□□□□ -0.21
CPSF1-201ENST00000526271 KLHL18O94889 574 aa13.71□□□□□ -0.21
CPSF1-201ENST00000526271 CRTAMO95727 393 aa13.71□□□□□ -0.21
CPSF1-201ENST00000526271 RBP3P10745 1247 aa13.71□□□□□ -0.21
CPSF1-201ENST00000526271 MAGP20916 626 aa13.71□□□□□ -0.21
CPSF1-201ENST00000526271 VARSP26640 1264 aaKnown RBP13.71□□□□□ -0.21
CPSF1-201ENST00000526271 GDF10P55107 478 aa13.71□□□□□ -0.21
CPSF1-201ENST00000526271 SRSF11Q05519 484 aaKnown RBP13.71□□□□□ -0.21
CPSF1-201ENST00000526271 SEMA3AQ14563 771 aa13.71□□□□□ -0.21
CPSF1-201ENST00000526271 NKG7Q16617 165 aa13.71□□□□□ -0.21
CPSF1-201ENST00000526271 FCRL6Q6DN72 434 aa13.71□□□□□ -0.21
CPSF1-201ENST00000526271 C11orf63Q6NUN7 778 aa13.71□□□□□ -0.21
CPSF1-201ENST00000526271 SHISA6Q6ZSJ9 500 aa13.71□□□□□ -0.21
CPSF1-201ENST00000526271 GPR135Q8IZ08 494 aa13.71□□□□□ -0.21
CPSF1-201ENST00000526271 GRHL3Q8TE85 626 aa13.71□□□□□ -0.21
CPSF1-201ENST00000526271 ZNF285Q96NJ3 590 aa13.71□□□□□ -0.21
CPSF1-201ENST00000526271 IL17FQ96PD4 163 aa13.71□□□□□ -0.21
CPSF1-201ENST00000526271 WDR77Q9BQA1 342 aaPredicted RBP13.71□□□□□ -0.21
CPSF1-201ENST00000526271 ILKAPQ9H0C8 392 aaPredicted RBP13.71□□□□□ -0.21
CPSF1-201ENST00000526271 EURLQ9NYK6 297 aa13.71□□□□□ -0.21
CPSF1-201ENST00000526271 CTSFQ9UBX1 484 aa13.71□□□□□ -0.21
CPSF1-201ENST00000526271 AP1M2Q9Y6Q5 423 aa13.71□□□□□ -0.21
CPSF1-201ENST00000526271 CCDC162PA2VCL2 907 aa13.7□□□□□ -0.22
CPSF1-201ENST00000526271 MROH6A6NGR9 719 aa13.7□□□□□ -0.22
CPSF1-201ENST00000526271 CFAP99D6REC4 459 aa13.7□□□□□ -0.22
CPSF1-201ENST00000526271 LRRTM2O43300 516 aa13.7□□□□□ -0.22
CPSF1-201ENST00000526271 ZG16O60844 167 aa13.7□□□□□ -0.22
CPSF1-201ENST00000526271 RALBP11234 206 aa13.7□□□□□ -0.22
CPSF1-201ENST00000526271 MMP11P24347 488 aa13.7□□□□□ -0.22
CPSF1-201ENST00000526271 PKLRP30613 574 aa13.7□□□□□ -0.22
CPSF1-201ENST00000526271 SHMT2P34897 504 aa13.7□□□□□ -0.22
CPSF1-201ENST00000526271 CTNNA1P35221 906 aaKnown RBP13.7□□□□□ -0.22
CPSF1-201ENST00000526271 MAGEA1P43355 309 aa13.7□□□□□ -0.22
CPSF1-201ENST00000526271 EFNA3P52797 238 aa13.7□□□□□ -0.22
CPSF1-201ENST00000526271 EIF3EP60228 445 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms