RNA–Protein interactions for RNA: ENST00000525688.5

CD44-220, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 560 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-220ENST00000525688 HSD17B2P37059 387 aa4.67□□□□□ -1.66
CD44-220ENST00000525688 PITPNBP48739 271 aa4.67□□□□□ -1.66
CD44-220ENST00000525688 ALDH7A1P49419 539 aaKnown RBP4.67□□□□□ -1.66
CD44-220ENST00000525688 BMXP51813 675 aa4.67□□□□□ -1.66
CD44-220ENST00000525688 RAD23BP54727 409 aa4.67□□□□□ -1.66
CD44-220ENST00000525688 GALCP54803 685 aa4.67□□□□□ -1.66
CD44-220ENST00000525688 SELENOVP59797 346 aa4.67□□□□□ -1.66
CD44-220ENST00000525688 STX1BP61266 288 aa4.67□□□□□ -1.66
CD44-220ENST00000525688 ACSM2AQ08AH3 577 aa4.67□□□□□ -1.66
CD44-220ENST00000525688 ELP6Q0PNE2 266 aa4.67□□□□□ -1.66
CD44-220ENST00000525688 TEFQ10587 303 aa4.67□□□□□ -1.66
CD44-220ENST00000525688 IKQ13123 557 aaPredicted RBP4.67□□□□□ -1.66
CD44-220ENST00000525688 NAE1Q13564 534 aa4.67□□□□□ -1.66
CD44-220ENST00000525688 ALCAMQ13740 583 aa4.67□□□□□ -1.66
CD44-220ENST00000525688 LAMB3Q13751 1172 aa4.67□□□□□ -1.66
CD44-220ENST00000525688 BAATQ14032 418 aaPredicted RBP4.67□□□□□ -1.66
CD44-220ENST00000525688 RPS6KA1Q15418 735 aa4.67□□□□□ -1.66
CD44-220ENST00000525688 C15orf59Q2T9L4 293 aaPredicted RBP4.67□□□□□ -1.66
CD44-220ENST00000525688 TWISTNBQ3B726 338 aaPredicted RBP4.67□□□□□ -1.66
CD44-220ENST00000525688 KRT71Q3SY84 523 aa4.67□□□□□ -1.66
CD44-220ENST00000525688 Q4G0T1 1027 aa4.67□□□□□ -1.66
CD44-220ENST00000525688 SPDYCQ5MJ68 293 aa4.67□□□□□ -1.66
CD44-220ENST00000525688 AADACL4Q5VUY2 407 aa4.67□□□□□ -1.66
CD44-220ENST00000525688 ACSM2BQ68CK6 577 aa4.67□□□□□ -1.66
CD44-220ENST00000525688 PPP1R21Q6ZMI0 780 aa4.67□□□□□ -1.66
CD44-220ENST00000525688 MTSS1LQ765P7 747 aa4.67□□□□□ -1.66
CD44-220ENST00000525688 ATG9AQ7Z3C6 839 aa4.67□□□□□ -1.66
CD44-220ENST00000525688 TLK2Q86UE8 772 aa4.67□□□□□ -1.66
CD44-220ENST00000525688 HAPLN4Q86UW8 402 aa4.67□□□□□ -1.66
CD44-220ENST00000525688 HOOK3Q86VS8 718 aa4.67□□□□□ -1.66
CD44-220ENST00000525688 CCDC13Q8IYE1 715 aa4.67□□□□□ -1.66
CD44-220ENST00000525688 MYOCDQ8IZQ8 938 aa4.67□□□□□ -1.66
CD44-220ENST00000525688 PDCL2Q8N4E4 241 aa4.67□□□□□ -1.66
CD44-220ENST00000525688 IL17RCQ8NAC3 791 aa4.67□□□□□ -1.66
CD44-220ENST00000525688 ATAD1Q8NBU5 361 aa4.67□□□□□ -1.66
CD44-220ENST00000525688 SCCPDHQ8NBX0 429 aa4.67□□□□□ -1.66
CD44-220ENST00000525688 PRSS3P2Q8NHM4 247 aa4.67□□□□□ -1.66
CD44-220ENST00000525688 URGCPQ8TCY9 931 aa4.67□□□□□ -1.66
CD44-220ENST00000525688 IGSF8Q969P0 613 aa4.67□□□□□ -1.66
CD44-220ENST00000525688 SAT2Q96F10 170 aaPredicted RBP4.67□□□□□ -1.66
CD44-220ENST00000525688 ELMOD3Q96FG2 381 aa4.67□□□□□ -1.66
CD44-220ENST00000525688 NAF1Q96HR8 494 aaKnown RBP4.67□□□□□ -1.66
CD44-220ENST00000525688 VCPIP1Q96JH7 1222 aa4.67□□□□□ -1.66
CD44-220ENST00000525688 ZNF570Q96NI8 536 aa4.67□□□□□ -1.66
CD44-220ENST00000525688 KCNK16Q96T55 309 aa4.67□□□□□ -1.66
CD44-220ENST00000525688 ERP44Q9BS26 406 aa4.67□□□□□ -1.66
CD44-220ENST00000525688 MRIQ9BWK5 157 aa4.67□□□□□ -1.66
CD44-220ENST00000525688 IFIH1Q9BYX4 1025 aaKnown RBP4.67□□□□□ -1.66
CD44-220ENST00000525688 PLK3Q9H4B4 646 aa4.67□□□□□ -1.66
CD44-220ENST00000525688 SETD4Q9NVD3 440 aa4.67□□□□□ -1.66
CD44-220ENST00000525688 TUBA8Q9NY65 449 aaPredicted RBP4.67□□□□□ -1.66
CD44-220ENST00000525688 WSB2Q9NYS7 404 aaPredicted RBP4.67□□□□□ -1.66
CD44-220ENST00000525688 TMOD2Q9NZR1 351 aa4.67□□□□□ -1.66
CD44-220ENST00000525688 CNIH4Q9P003 139 aa4.67□□□□□ -1.66
CD44-220ENST00000525688 TEKT2Q9UIF3 430 aa4.67□□□□□ -1.66
CD44-220ENST00000525688 MTUS1Q9ULD2 1270 aa4.67□□□□□ -1.66
CD44-220ENST00000525688 EXO1Q9UQ84 846 aaKnown RBP4.67□□□□□ -1.66
CD44-220ENST00000525688 ERVK-11Q9UQG0 969 aa4.67□□□□□ -1.66
CD44-220ENST00000525688 PTRH2Q9Y3E5 179 aaKnown RBP4.67□□□□□ -1.66
CD44-220ENST00000525688 STON1Q9Y6Q2 735 aa4.67□□□□□ -1.66
CD44-220ENST00000525688 TTC41PQ6P2S7 1318 aa4.67□□□□□ -1.66
CD44-220ENST00000525688 FAM205AQ6ZU69 1335 aa4.67□□□□□ -1.66
CD44-220ENST00000525688 MEGF6O75095 1541 aa4.67□□□□□ -1.66
CD44-220ENST00000525688 RGPD2P0DJD1 1756 aa4.66□□□□□ -1.66
CD44-220ENST00000525688 WNT9BO14905 357 aa4.66□□□□□ -1.66
CD44-220ENST00000525688 PAPSS1O43252 624 aaPredicted RBP4.66□□□□□ -1.66
CD44-220ENST00000525688 LDB2O43679 373 aa4.66□□□□□ -1.66
CD44-220ENST00000525688 SPOPO43791 374 aa4.66□□□□□ -1.66
CD44-220ENST00000525688 CYP1A2P05177 515 aa4.66□□□□□ -1.66
CD44-220ENST00000525688 FGF2P09038 288 aa4.66□□□□□ -1.66
CD44-220ENST00000525688 CBSLP0DN79 551 aa4.66□□□□□ -1.66
CD44-220ENST00000525688 KRT5P13647 590 aa4.66□□□□□ -1.66
CD44-220ENST00000525688 ERCC2P18074 760 aa4.66□□□□□ -1.66
CD44-220ENST00000525688 RPA1P27694 616 aa4.66□□□□□ -1.66
CD44-220ENST00000525688 ACADLP28330 430 aa4.66□□□□□ -1.66
CD44-220ENST00000525688 CBSP35520 551 aa4.66□□□□□ -1.66
CD44-220ENST00000525688 KHKP50053 298 aa4.66□□□□□ -1.66
CD44-220ENST00000525688 CLCN3P51790 818 aa4.66□□□□□ -1.66
CD44-220ENST00000525688 STAT2P52630 851 aa4.66□□□□□ -1.66
CD44-220ENST00000525688 MFAP4P55083 255 aa4.66□□□□□ -1.66
CD44-220ENST00000525688 ADARP55265 1226 aaKnown RBP4.66□□□□□ -1.66
CD44-220ENST00000525688 SORDQ00796 357 aa4.66□□□□□ -1.66
CD44-220ENST00000525688 PRKCEQ02156 737 aa4.66□□□□□ -1.66
CD44-220ENST00000525688 HIST2H2BCQ6DN03 193 aa4.66□□□□□ -1.66
CD44-220ENST00000525688 HIST2H2BDQ6DRA6 164 aa4.66□□□□□ -1.66
CD44-220ENST00000525688 RBPMS2Q6ZRY4 209 aaKnown RBP4.66□□□□□ -1.66
CD44-220ENST00000525688 TRAPPC11Q7Z392 1133 aa4.66□□□□□ -1.66
CD44-220ENST00000525688 DEFB132Q7Z7B7 95 aa4.66□□□□□ -1.66
CD44-220ENST00000525688 TAF8Q7Z7C8 310 aa4.66□□□□□ -1.66
CD44-220ENST00000525688 MB21D2Q8IYB1 491 aaPredicted RBP4.66□□□□□ -1.66
CD44-220ENST00000525688 ARFGAP1Q8N6T3 406 aa4.66□□□□□ -1.66
CD44-220ENST00000525688 SLC4A11Q8NBS3 891 aa4.66□□□□□ -1.66
CD44-220ENST00000525688 HJURPQ8NCD3 748 aaPredicted RBP4.66□□□□□ -1.66
CD44-220ENST00000525688 AGBL3Q8NEM8 1001 aa4.66□□□□□ -1.66
CD44-220ENST00000525688 OR14L1PQ8NHC6 308 aa4.66□□□□□ -1.66
CD44-220ENST00000525688 GPT2Q8TD30 523 aa4.66□□□□□ -1.66
CD44-220ENST00000525688 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.66□□□□□ -1.66
CD44-220ENST00000525688 DDB2Q92466 427 aa4.66□□□□□ -1.66
CD44-220ENST00000525688 INPP5DQ92835 1189 aa4.66□□□□□ -1.66
CD44-220ENST00000525688 ZG16BQ96DA0 208 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms