RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 VIPP01282 170 aa13.44□□□□□ -0.26
LRRK1-202ENST00000525284 MSX1P28360 303 aa13.44□□□□□ -0.26
LRRK1-202ENST00000525284 XKP51811 444 aa13.44□□□□□ -0.26
LRRK1-202ENST00000525284 NPTX1Q15818 432 aa13.44□□□□□ -0.26
LRRK1-202ENST00000525284 MSANTD2Q6P1R3 559 aa13.44□□□□□ -0.26
LRRK1-202ENST00000525284 SAMD7Q7Z3H4 446 aa13.44□□□□□ -0.26
LRRK1-202ENST00000525284 HSPBAP1Q96EW2 488 aa13.44□□□□□ -0.26
LRRK1-202ENST00000525284 HBEGFQ99075 208 aa13.44□□□□□ -0.26
LRRK1-202ENST00000525284 IPPKQ9H8X2 491 aa13.44□□□□□ -0.26
LRRK1-202ENST00000525284 PRDM16Q9HAZ2 1276 aa13.44□□□□□ -0.26
LRRK1-202ENST00000525284 CFL2Q9Y281 166 aa13.44□□□□□ -0.26
LRRK1-202ENST00000525284 MYO3AQ8NEV4 1616 aa13.44□□□□□ -0.26
LRRK1-202ENST00000525284 J3QLW9 94 aa13.44□□□□□ -0.26
LRRK1-202ENST00000525284 TSHRP16473 764 aa13.44□□□□□ -0.26
LRRK1-202ENST00000525284 ZNF19P17023 458 aa13.44□□□□□ -0.26
LRRK1-202ENST00000525284 SREBF1P36956 1147 aa13.44□□□□□ -0.26
LRRK1-202ENST00000525284 ZNF45Q02386 682 aa13.44□□□□□ -0.26
LRRK1-202ENST00000525284 ZACNQ401N2 412 aa13.44□□□□□ -0.26
LRRK1-202ENST00000525284 FIP1L1Q6UN15 594 aaKnown RBP13.44□□□□□ -0.26
LRRK1-202ENST00000525284 ZBTB2Q8N680 514 aa13.44□□□□□ -0.26
LRRK1-202ENST00000525284 ACSS3Q9H6R3 686 aa13.44□□□□□ -0.26
LRRK1-202ENST00000525284 PCYOX1Q9UHG3 505 aa13.44□□□□□ -0.26
LRRK1-202ENST00000525284 MAP2K7O14733 419 aa13.44□□□□□ -0.26
LRRK1-202ENST00000525284 CYP3A4P08684 503 aa13.44□□□□□ -0.26
LRRK1-202ENST00000525284 KCNJ5P48544 419 aa13.44□□□□□ -0.26
LRRK1-202ENST00000525284 TSTQ16762 297 aaKnown RBP13.44□□□□□ -0.26
LRRK1-202ENST00000525284 HHIPL2Q6UWX4 724 aa13.44□□□□□ -0.26
LRRK1-202ENST00000525284 PM20D2Q8IYS1 436 aa13.44□□□□□ -0.26
LRRK1-202ENST00000525284 POLR2J3Q9H1A7 115 aaKnown RBP13.44□□□□□ -0.26
LRRK1-202ENST00000525284 MKKSQ9NPJ1 570 aaPredicted RBP13.44□□□□□ -0.26
LRRK1-202ENST00000525284 C19orf12Q9NSK7 152 aa13.44□□□□□ -0.26
LRRK1-202ENST00000525284 CALML5Q9NZT1 146 aa13.44□□□□□ -0.26
LRRK1-202ENST00000525284 A0A0G2JMP0 313 aa13.44□□□□□ -0.26
LRRK1-202ENST00000525284 CDRT1O95170 752 aa13.44□□□□□ -0.26
LRRK1-202ENST00000525284 IFNA5P01569 189 aa13.44□□□□□ -0.26
LRRK1-202ENST00000525284 CXCR1P25024 350 aa13.44□□□□□ -0.26
LRRK1-202ENST00000525284 GTF2A2P52657 109 aa13.44□□□□□ -0.26
LRRK1-202ENST00000525284 PDE12Q6L8Q7 609 aaKnown RBP13.44□□□□□ -0.26
LRRK1-202ENST00000525284 KLHDC10Q6PID8 442 aa13.44□□□□□ -0.26
LRRK1-202ENST00000525284 ZNF773Q6PK81 442 aa13.44□□□□□ -0.26
LRRK1-202ENST00000525284 OR4M2Q8NGB6 313 aa13.44□□□□□ -0.26
LRRK1-202ENST00000525284 IL4I1Q96RQ9 567 aa13.44□□□□□ -0.26
LRRK1-202ENST00000525284 ADGRB3O60242 1522 aa13.44□□□□□ -0.26
LRRK1-202ENST00000525284 CSF2P04141 144 aa13.44□□□□□ -0.26
LRRK1-202ENST00000525284 PRKACAP17612 351 aa13.44□□□□□ -0.26
LRRK1-202ENST00000525284 PRKAR1BP31321 381 aa13.44□□□□□ -0.26
LRRK1-202ENST00000525284 SLC13A2Q13183 592 aa13.44□□□□□ -0.26
LRRK1-202ENST00000525284 KLF1Q13351 362 aaPredicted RBP13.44□□□□□ -0.26
LRRK1-202ENST00000525284 MLIPQ5VWP3 458 aa13.44□□□□□ -0.26
LRRK1-202ENST00000525284 ADGRD2Q7Z7M1 963 aa13.44□□□□□ -0.26
LRRK1-202ENST00000525284 NPLOC4Q8TAT6 608 aa13.44□□□□□ -0.26
LRRK1-202ENST00000525284 TPT1P8Q9HAU6 139 aa13.44□□□□□ -0.26
LRRK1-202ENST00000525284 IQSEC2Q5JU85 1478 aa13.43□□□□□ -0.26
LRRK1-202ENST00000525284 A0A0U1RQK1 487 aa13.43□□□□□ -0.26
LRRK1-202ENST00000525284 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.43□□□□□ -0.26
LRRK1-202ENST00000525284 TMEM150BA6NC51 233 aa13.43□□□□□ -0.26
LRRK1-202ENST00000525284 RHPN2P1A8MT19 583 aa13.43□□□□□ -0.26
LRRK1-202ENST00000525284 ZNF254O75437 659 aa13.43□□□□□ -0.26
LRRK1-202ENST00000525284 WDPCPO95876 746 aa13.43□□□□□ -0.26
LRRK1-202ENST00000525284 CCNOP22674 350 aa13.43□□□□□ -0.26
LRRK1-202ENST00000525284 CDKN2CP42773 168 aa13.43□□□□□ -0.26
LRRK1-202ENST00000525284 MERTKQ12866 999 aa13.43□□□□□ -0.26
LRRK1-202ENST00000525284 C1orf94Q6P1W5 598 aa13.43□□□□□ -0.26
LRRK1-202ENST00000525284 SLC35G5Q96KT7 338 aa13.43□□□□□ -0.26
LRRK1-202ENST00000525284 IL25Q9H293 177 aa13.43□□□□□ -0.26
LRRK1-202ENST00000525284 CDC42BPGQ6DT37 1551 aa13.43□□□□□ -0.26
LRRK1-202ENST00000525284 NRKQ7Z2Y5 1582 aa13.43□□□□□ -0.26
LRRK1-202ENST00000525284 HSPA7P48741 367 aa13.43□□□□□ -0.26
LRRK1-202ENST00000525284 ZNF616Q08AN1 781 aa13.43□□□□□ -0.26
LRRK1-202ENST00000525284 NFIXQ14938 502 aa13.43□□□□□ -0.26
LRRK1-202ENST00000525284 CRB2Q5IJ48 1285 aa13.43□□□□□ -0.26
LRRK1-202ENST00000525284 GPR158Q5T848 1215 aa13.43□□□□□ -0.26
LRRK1-202ENST00000525284 MED27Q6P2C8 311 aa13.43□□□□□ -0.26
LRRK1-202ENST00000525284 NCEH1Q6PIU2 408 aa13.43□□□□□ -0.26
LRRK1-202ENST00000525284 GIMAP5Q96F15 307 aa13.43□□□□□ -0.26
LRRK1-202ENST00000525284 ASB7Q9H672 318 aa13.43□□□□□ -0.26
LRRK1-202ENST00000525284 PPRC1Q5VV67 1664 aaKnown RBP13.43□□□□□ -0.26
LRRK1-202ENST00000525284 TCAF2A6NFQ2 919 aa13.43□□□□□ -0.26
LRRK1-202ENST00000525284 XPNPEP2O43895 674 aa13.43□□□□□ -0.26
LRRK1-202ENST00000525284 PCCBP05166 539 aa13.43□□□□□ -0.26
LRRK1-202ENST00000525284 ALPPP05187 535 aa13.43□□□□□ -0.26
LRRK1-202ENST00000525284 SLC26A2P50443 739 aa13.43□□□□□ -0.26
LRRK1-202ENST00000525284 CLCN4P51793 760 aa13.43□□□□□ -0.26
LRRK1-202ENST00000525284 GNMTQ14749 295 aa13.43□□□□□ -0.26
LRRK1-202ENST00000525284 CES5AQ6NT32 575 aa13.43□□□□□ -0.26
LRRK1-202ENST00000525284 ANKRD52Q8NB46 1076 aa13.43□□□□□ -0.26
LRRK1-202ENST00000525284 HCAR2Q8TDS4 363 aa13.43□□□□□ -0.26
LRRK1-202ENST00000525284 GPR151Q8TDV0 419 aa13.43□□□□□ -0.26
LRRK1-202ENST00000525284 THEM6Q8WUY1 208 aa13.43□□□□□ -0.26
LRRK1-202ENST00000525284 KLHL6Q8WZ60 621 aa13.43□□□□□ -0.26
LRRK1-202ENST00000525284 OR8D1Q8WZ84 308 aa13.43□□□□□ -0.26
LRRK1-202ENST00000525284 OTUB2Q96DC9 234 aa13.43□□□□□ -0.26
LRRK1-202ENST00000525284 TMEM41AQ96HV5 264 aa13.43□□□□□ -0.26
LRRK1-202ENST00000525284 TRMOQ9BU70 441 aa13.43□□□□□ -0.26
LRRK1-202ENST00000525284 HCN2Q9UL51 889 aa13.43□□□□□ -0.26
LRRK1-202ENST00000525284 CMAHPQ9Y471 501 aa13.43□□□□□ -0.26
LRRK1-202ENST00000525284 H6PDO95479 791 aa13.43□□□□□ -0.26
LRRK1-202ENST00000525284 IFNA1P01562 189 aa13.43□□□□□ -0.26
LRRK1-202ENST00000525284 TNFRSF8P28908 595 aa13.43□□□□□ -0.26
LRRK1-202ENST00000525284 RBMXP38159 391 aaKnown RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms