RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 DNAH14Q0VDD8 3507 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 A0A096LPK6 155 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 TEX51A0A1B0GUA7 166 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 A0A1W2PPV9 198 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 PIPSLA2A3N6 862 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 KLHL33A6NCF5 533 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 TRABD2BA6NFA1 517 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 LRRC14BA6NHZ5 514 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 EFCAB7A8K855 629 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 UBXN8O00124 270 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 RASGRF2O14827 1237 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 HCRTR1O43613 425 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 PSIP1O75475 530 aaKnown RBP4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 TNFSF15O95150 251 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 WISP3O95389 354 aaPredicted RBP4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 SLC16A8O95907 504 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 CATP04040 527 aaKnown RBP4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 ALDOAP04075 364 aaKnown RBP4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 C2P06681 752 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 GSTM1P09488 218 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 EBLN1P0CF75 366 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 MPC1LP0DKB6 136 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 CBSLP0DN79 551 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 THRAP10827 490 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 FGF3P11487 239 aaPredicted RBP4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 FOLR1P15328 257 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 CD1DP15813 335 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 ST6GAL1P15907 406 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 PNLIPP16233 465 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 TFEBP19484 476 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 MAGP20916 626 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 CD9P21926 228 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 CDH3P22223 829 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 MAP4P27816 1152 aaKnown RBP4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 NDUFS1P28331 727 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 TYK2P29597 1187 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 PRDX3P30048 256 aaKnown RBP4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 PKLRP30613 574 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 CBSP35520 551 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 GDF5P43026 501 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 CAPZBP47756 277 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 RGS4P49798 205 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 EPHA4P54764 986 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 GABREP78334 506 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 POU4F1Q01851 419 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 GSTM4Q03013 218 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 ZFP36L1Q07352 338 aaKnown RBP4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 FOXM1Q08050 763 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 CYP4F3Q08477 520 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 PRKAA1Q13131 559 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 ILKQ13418 452 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 CAMK2BQ13554 666 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 NAE1Q13564 534 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 SF1Q15637 639 aaKnown RBP4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 GPR19Q15760 415 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 ZIC1Q15915 447 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 THEMIS2Q5TEJ8 643 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 KIAA1614Q5VZ46 1190 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 WDR93Q6P2C0 686 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 C16orf46Q6P387 395 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 TMEM71Q6P5X7 295 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 TTC23LQ6PF05 361 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 UNC5DQ6UXZ4 953 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 CEP128Q6ZU80 1094 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 CYS1Q717R9 158 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 RPS27LQ71UM5 84 aaKnown RBP4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 RAB11FIP2Q7L804 512 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 TMPRSS7Q7RTY8 843 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 GALNT7Q86SF2 657 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 OOSP2Q86WS3 158 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 TMPRSS12Q86WS5 348 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 PLD3Q8IV08 490 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 DCUN1D3Q8IWE4 304 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 SYTL1Q8IYJ3 562 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 C4orf33Q8N1A6 199 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 FBXO39Q8N4B4 442 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 DCBLD1Q8N8Z6 715 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 AVL9Q8NBF6 648 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 OR6C4Q8NGE1 309 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 OR4D9Q8NGE8 314 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 OR9A1PQ8NGU1 263 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 FLVCR1-AS1Q8TAF5 88 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 ZNF480Q8WV37 535 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 USP7Q93009 1102 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 PTERQ96BW5 349 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 PRR11Q96HE9 360 aaPredicted RBP4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 SCYL1Q96KG9 808 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 TSNARE1Q96NA8 513 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 DEPDC7Q96QD5 511 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 OR2A14Q96R47 310 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 EGFL8Q99944 293 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 MACROD1Q9BQ69 325 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 MENTQ9BUN1 341 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 TSPYL1Q9H0U9 437 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 TFB2MQ9H5Q4 396 aaKnown RBP4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 ALG9Q9H6U8 611 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 FAM60AQ9NP50 221 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 IGSF5Q9NSI5 407 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 STARD5Q9NSY2 213 aa4.45□□□□□ -1.7
CHMP4A-202ENST00000524955 PCMTD2Q9NV79 361 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms