RNA–Protein interactions for RNA: ENST00000523549.1

NSMCE2-211, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-211ENST00000523549 KDM4BO94953 1096 aa3.7□□□□□ -1.82
NSMCE2-211ENST00000523549 GGPS1O95749 300 aa3.7□□□□□ -1.82
NSMCE2-211ENST00000523549 EGFP01133 1207 aa3.7□□□□□ -1.82
NSMCE2-211ENST00000523549 GALTP07902 379 aa3.7□□□□□ -1.82
NSMCE2-211ENST00000523549 PPP2R1AP30153 589 aa3.7□□□□□ -1.82
NSMCE2-211ENST00000523549 LIFRP42702 1097 aa3.7□□□□□ -1.82
NSMCE2-211ENST00000523549 SLC11A1P49279 550 aa3.7□□□□□ -1.82
NSMCE2-211ENST00000523549 RARSP54136 660 aaKnown RBP3.7□□□□□ -1.82
NSMCE2-211ENST00000523549 MLLT10P55197 1068 aa3.7□□□□□ -1.82
NSMCE2-211ENST00000523549 RPS6P62753 249 aaKnown RBP3.7□□□□□ -1.82
NSMCE2-211ENST00000523549 GOLGA8FQ08AF8 430 aa3.7□□□□□ -1.82
NSMCE2-211ENST00000523549 ZBTB17Q13105 803 aa3.7□□□□□ -1.82
NSMCE2-211ENST00000523549 SRSF6Q13247 344 aaKnown RBP3.7□□□□□ -1.82
NSMCE2-211ENST00000523549 BIRC2Q13490 618 aa3.7□□□□□ -1.82
NSMCE2-211ENST00000523549 CUL4BQ13620 913 aa3.7□□□□□ -1.82
NSMCE2-211ENST00000523549 TIGD6Q17RP2 521 aa3.7□□□□□ -1.82
NSMCE2-211ENST00000523549 CBWD5Q5RIA9 395 aa3.7□□□□□ -1.82
NSMCE2-211ENST00000523549 JMJD6Q6NYC1 403 aaPredicted RBP3.7□□□□□ -1.82
NSMCE2-211ENST00000523549 C1orf228Q6PIY5 440 aa3.7□□□□□ -1.82
NSMCE2-211ENST00000523549 SHFQ7M4L6 423 aa3.7□□□□□ -1.82
NSMCE2-211ENST00000523549 RALGPS2Q86X27 583 aaPredicted RBP3.7□□□□□ -1.82
NSMCE2-211ENST00000523549 FAM114A1Q8IWE2 563 aa3.7□□□□□ -1.82
NSMCE2-211ENST00000523549 SLC34A3Q8N130 599 aa3.7□□□□□ -1.82
NSMCE2-211ENST00000523549 ZNF485Q8NCK3 441 aa3.7□□□□□ -1.82
NSMCE2-211ENST00000523549 DNAAF1Q8NEP3 725 aa3.7□□□□□ -1.82
NSMCE2-211ENST00000523549 TSTD1Q8NFU3 115 aa3.7□□□□□ -1.82
NSMCE2-211ENST00000523549 RPLP0P6Q8NHW5 317 aa3.7□□□□□ -1.82
NSMCE2-211ENST00000523549 THAP4Q8WY91 577 aa3.7□□□□□ -1.82
NSMCE2-211ENST00000523549 TRIM63Q969Q1 353 aa3.7□□□□□ -1.82
NSMCE2-211ENST00000523549 MSANTD3Q96H12 275 aa3.7□□□□□ -1.82
NSMCE2-211ENST00000523549 ZNF578Q96N58 590 aaPredicted RBP3.7□□□□□ -1.82
NSMCE2-211ENST00000523549 APOL6Q9BWW8 343 aa3.7□□□□□ -1.82
NSMCE2-211ENST00000523549 TMEM245Q9H330 911 aa3.7□□□□□ -1.82
NSMCE2-211ENST00000523549 ZNF696Q9H7X3 374 aa3.7□□□□□ -1.82
NSMCE2-211ENST00000523549 CHODLQ9H9P2 273 aa3.7□□□□□ -1.82
NSMCE2-211ENST00000523549 PLCB1Q9NQ66 1216 aa3.7□□□□□ -1.82
NSMCE2-211ENST00000523549 MCM9Q9NXL9 1143 aa3.7□□□□□ -1.82
NSMCE2-211ENST00000523549 SLCO3A1Q9UIG8 710 aa3.7□□□□□ -1.82
NSMCE2-211ENST00000523549 TUBE1Q9UJT0 475 aa3.7□□□□□ -1.82
NSMCE2-211ENST00000523549 TCF19Q9Y242 345 aa3.7□□□□□ -1.82
NSMCE2-211ENST00000523549 RYR1P21817 5038 aa3.7□□□□□ -1.82
NSMCE2-211ENST00000523549 PRRC2AP48634 2157 aaKnown RBP3.7□□□□□ -1.82
NSMCE2-211ENST00000523549 CCDC171Q6TFL3 1326 aa3.7□□□□□ -1.82
NSMCE2-211ENST00000523549 WNK1Q9H4A3 2382 aa3.69□□□□□ -1.82
NSMCE2-211ENST00000523549 M0QZ92 97 aa3.69□□□□□ -1.82
NSMCE2-211ENST00000523549 FLRT2O43155 660 aa3.69□□□□□ -1.82
NSMCE2-211ENST00000523549 HSPA12AO43301 675 aa3.69□□□□□ -1.82
NSMCE2-211ENST00000523549 CLDN14O95500 239 aa3.69□□□□□ -1.82
NSMCE2-211ENST00000523549 TBX6O95947 436 aaPredicted RBP3.69□□□□□ -1.82
NSMCE2-211ENST00000523549 TFPIP10646 304 aa3.69□□□□□ -1.82
NSMCE2-211ENST00000523549 P2RY2P41231 377 aa3.69□□□□□ -1.82
NSMCE2-211ENST00000523549 AARSP49588 968 aaKnown RBP eCLIP3.69□□□□□ -1.82
NSMCE2-211ENST00000523549 STAT2P52630 851 aa3.69□□□□□ -1.82
NSMCE2-211ENST00000523549 IKQ13123 557 aaPredicted RBP3.69□□□□□ -1.82
NSMCE2-211ENST00000523549 SLC18A3Q16572 532 aa3.69□□□□□ -1.82
NSMCE2-211ENST00000523549 PPM1LQ5SGD2 360 aa3.69□□□□□ -1.82
NSMCE2-211ENST00000523549 CELF3Q5SZQ8 465 aaKnown RBP3.69□□□□□ -1.82
NSMCE2-211ENST00000523549 TIPARPQ7Z3E1 657 aaKnown RBP3.69□□□□□ -1.82
NSMCE2-211ENST00000523549 PHC2Q8IXK0 858 aa3.69□□□□□ -1.82
NSMCE2-211ENST00000523549 KBTBD3Q8NAB2 608 aa3.69□□□□□ -1.82
NSMCE2-211ENST00000523549 HSPH1Q92598 858 aa3.69□□□□□ -1.82
NSMCE2-211ENST00000523549 TCEAL4Q96EI5 215 aa3.69□□□□□ -1.82
NSMCE2-211ENST00000523549 B3GALT6Q96L58 329 aa3.69□□□□□ -1.82
NSMCE2-211ENST00000523549 GDE1Q9NZC3 331 aa3.69□□□□□ -1.82
NSMCE2-211ENST00000523549 ZNF224Q9NZL3 707 aa3.69□□□□□ -1.82
NSMCE2-211ENST00000523549 NDRG3Q9UGV2 375 aa3.69□□□□□ -1.82
NSMCE2-211ENST00000523549 SWAP70Q9UH65 585 aa3.69□□□□□ -1.82
NSMCE2-211ENST00000523549 ANAPC2Q9UJX6 822 aa3.69□□□□□ -1.82
NSMCE2-211ENST00000523549 GINS2Q9Y248 185 aa3.69□□□□□ -1.82
NSMCE2-211ENST00000523549 ZNF711Q9Y462 761 aa3.69□□□□□ -1.82
NSMCE2-211ENST00000523549 SNX9Q9Y5X1 595 aa3.69□□□□□ -1.82
NSMCE2-211ENST00000523549 PRKDCP78527 4128 aaKnown RBP3.69□□□□□ -1.82
NSMCE2-211ENST00000523549 OBSL1O75147 1896 aa3.69□□□□□ -1.82
NSMCE2-211ENST00000523549 HYDINQ4G0P3 5121 aa3.68□□□□□ -1.82
NSMCE2-211ENST00000523549 MBLAC1A4D2B0 266 aaPredicted RBP3.68□□□□□ -1.82
NSMCE2-211ENST00000523549 HEPACAM2A8MVW5 462 aa3.68□□□□□ -1.82
NSMCE2-211ENST00000523549 ZNF587BE7ETH6 402 aa3.68□□□□□ -1.82
NSMCE2-211ENST00000523549 F5H423 210 aaPredicted RBP3.68□□□□□ -1.82
NSMCE2-211ENST00000523549 STX16-NPEPL1H3BU86 382 aa3.68□□□□□ -1.82
NSMCE2-211ENST00000523549 STX16O14662 325 aa3.68□□□□□ -1.82
NSMCE2-211ENST00000523549 RPS6KA5O75582 802 aa3.68□□□□□ -1.82
NSMCE2-211ENST00000523549 SLC22A3O75751 556 aa3.68□□□□□ -1.82
NSMCE2-211ENST00000523549 TK1P04183 234 aa3.68□□□□□ -1.82
NSMCE2-211ENST00000523549 FGF5P12034 268 aa3.68□□□□□ -1.82
NSMCE2-211ENST00000523549 SRD5A1P18405 259 aa3.68□□□□□ -1.82
NSMCE2-211ENST00000523549 UBA1P22314 1058 aaKnown RBP3.68□□□□□ -1.82
NSMCE2-211ENST00000523549 U2AF2P26368 475 aaKnown RBP eCLIP3.68□□□□□ -1.82
NSMCE2-211ENST00000523549 RYKP34925 604 aa3.68□□□□□ -1.82
NSMCE2-211ENST00000523549 CRYBB1P53674 252 aaPredicted RBP3.68□□□□□ -1.82
NSMCE2-211ENST00000523549 NLRP5P59047 1200 aa3.68□□□□□ -1.82
NSMCE2-211ENST00000523549 ZNF155Q12901 538 aaPredicted RBP3.68□□□□□ -1.82
NSMCE2-211ENST00000523549 PPFIA1Q13136 1202 aa3.68□□□□□ -1.82
NSMCE2-211ENST00000523549 DNAJC3Q13217 504 aa3.68□□□□□ -1.82
NSMCE2-211ENST00000523549 MARCH8Q5T0T0 291 aa3.68□□□□□ -1.82
NSMCE2-211ENST00000523549 DENND1BQ6P3S1 775 aa3.68□□□□□ -1.82
NSMCE2-211ENST00000523549 PRSS45Q7RTY3 260 aa3.68□□□□□ -1.82
NSMCE2-211ENST00000523549 SATL1Q86VE3 508 aa3.68□□□□□ -1.82
NSMCE2-211ENST00000523549 ECHDC2Q86YB7 292 aa3.68□□□□□ -1.82
NSMCE2-211ENST00000523549 EPHX4Q8IUS5 362 aa3.68□□□□□ -1.82
NSMCE2-211ENST00000523549 SAMD3Q8N6K7 520 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms