RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 PTPN5P54829 565 aa15.93■□□□□ 0.14
PCDHA3-201ENST00000522353 GDF10P55107 478 aa15.93■□□□□ 0.14
PCDHA3-201ENST00000522353 ZNF846Q147U1 533 aa15.93■□□□□ 0.14
PCDHA3-201ENST00000522353 PITRM1Q5JRX3 1037 aa15.93■□□□□ 0.14
PCDHA3-201ENST00000522353 SLC29A4Q7RTT9 530 aa15.93■□□□□ 0.14
PCDHA3-201ENST00000522353 POC5Q8NA72 575 aa15.93■□□□□ 0.14
PCDHA3-201ENST00000522353 ESAMQ96AP7 390 aa15.93■□□□□ 0.14
PCDHA3-201ENST00000522353 FCRL4Q96PJ5 515 aa15.93■□□□□ 0.14
PCDHA3-201ENST00000522353 HIST1H2AAQ96QV6 131 aa15.93■□□□□ 0.14
PCDHA3-201ENST00000522353 CLCC1Q96S66 551 aa15.93■□□□□ 0.14
PCDHA3-201ENST00000522353 PNO1Q9NRX1 252 aaKnown RBP15.93■□□□□ 0.14
PCDHA3-201ENST00000522353 SERTAD3Q9UJW9 196 aa15.93■□□□□ 0.14
PCDHA3-201ENST00000522353 PCDHB3Q9Y5E6 796 aa15.93■□□□□ 0.14
PCDHA3-201ENST00000522353 TAF4O00268 1085 aa15.93■□□□□ 0.14
PCDHA3-201ENST00000522353 MPZL2O60487 215 aa15.93■□□□□ 0.14
PCDHA3-201ENST00000522353 TULP3O75386 442 aa15.93■□□□□ 0.14
PCDHA3-201ENST00000522353 PRPS1L1P21108 318 aa15.93■□□□□ 0.14
PCDHA3-201ENST00000522353 KCTD21Q4G0X4 260 aa15.93■□□□□ 0.14
PCDHA3-201ENST00000522353 IFI44LQ53G44 452 aa15.93■□□□□ 0.14
PCDHA3-201ENST00000522353 OLFML1Q6UWY5 402 aa15.93■□□□□ 0.14
PCDHA3-201ENST00000522353 ANKRD46Q86W74 232 aa15.93■□□□□ 0.14
PCDHA3-201ENST00000522353 SPPL2CQ8IUH8 684 aa15.93■□□□□ 0.14
PCDHA3-201ENST00000522353 FAM47BQ8NA70 645 aa15.93■□□□□ 0.14
PCDHA3-201ENST00000522353 COX4I2Q96KJ9 171 aa15.93■□□□□ 0.14
PCDHA3-201ENST00000522353 PIGUQ9H490 435 aa15.93■□□□□ 0.14
PCDHA3-201ENST00000522353 VPS29Q9UBQ0 182 aa15.93■□□□□ 0.14
PCDHA3-201ENST00000522353 CICQ96RK0 1608 aaPredicted RBP15.92■□□□□ 0.14
PCDHA3-201ENST00000522353 J3KR12 359 aa15.92■□□□□ 0.14
PCDHA3-201ENST00000522353 DCLK1O15075 740 aa15.92■□□□□ 0.14
PCDHA3-201ENST00000522353 ERI3O43414 337 aaKnown RBP15.92■□□□□ 0.14
PCDHA3-201ENST00000522353 IQCF3P0C7M6 154 aa15.92■□□□□ 0.14
PCDHA3-201ENST00000522353 NFATC2Q13469 925 aa15.92■□□□□ 0.14
PCDHA3-201ENST00000522353 GPR107Q5VW38 600 aa15.92■□□□□ 0.14
PCDHA3-201ENST00000522353 MLIPQ5VWP3 458 aa15.92■□□□□ 0.14
PCDHA3-201ENST00000522353 ARHGAP22Q7Z5H3 698 aa15.92■□□□□ 0.14
PCDHA3-201ENST00000522353 TMEM156Q8N614 296 aa15.92■□□□□ 0.14
PCDHA3-201ENST00000522353 OR4C6Q8NH72 309 aa15.92■□□□□ 0.14
PCDHA3-201ENST00000522353 TEPSINQ96N21 525 aa15.92■□□□□ 0.14
PCDHA3-201ENST00000522353 SLC32A1Q9H598 525 aa15.92■□□□□ 0.14
PCDHA3-201ENST00000522353 NCDNQ9UBB6 729 aa15.92■□□□□ 0.14
PCDHA3-201ENST00000522353 KLF15Q9UIH9 416 aa15.92■□□□□ 0.14
PCDHA3-201ENST00000522353 PHF11Q9UIL8 331 aa15.92■□□□□ 0.14
PCDHA3-201ENST00000522353 DGKBQ9Y6T7 804 aa15.92■□□□□ 0.14
PCDHA3-201ENST00000522353 PIK3C2AO00443 1686 aa15.92■□□□□ 0.14
PCDHA3-201ENST00000522353 PDE4DIPQ5VU43 2346 aa15.92■□□□□ 0.14
PCDHA3-201ENST00000522353 PLK4O00444 970 aa15.92■□□□□ 0.14
PCDHA3-201ENST00000522353 PIRO00625 290 aa15.92■□□□□ 0.14
PCDHA3-201ENST00000522353 NME6O75414 186 aaPredicted RBP15.92■□□□□ 0.14
PCDHA3-201ENST00000522353 GPIP06744 558 aa15.92■□□□□ 0.14
PCDHA3-201ENST00000522353 PRKCHP24723 683 aa15.92■□□□□ 0.14
PCDHA3-201ENST00000522353 DLG1Q12959 904 aa15.92■□□□□ 0.14
PCDHA3-201ENST00000522353 ZNF460Q14592 562 aa15.92■□□□□ 0.14
PCDHA3-201ENST00000522353 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.92■□□□□ 0.14
PCDHA3-201ENST00000522353 ARL10Q8N8L6 244 aa15.92■□□□□ 0.14
PCDHA3-201ENST00000522353 RBM15BQ8NDT2 890 aaKnown RBP15.92■□□□□ 0.14
PCDHA3-201ENST00000522353 BCAS3Q9H6U6 928 aa15.92■□□□□ 0.14
PCDHA3-201ENST00000522353 ABCB10Q9NRK6 738 aa15.92■□□□□ 0.14
PCDHA3-201ENST00000522353 CDH22Q9UJ99 828 aa15.92■□□□□ 0.14
PCDHA3-201ENST00000522353 GOLGA4Q13439 2230 aaKnown RBP15.92■□□□□ 0.14
PCDHA3-201ENST00000522353 MTX2O75431 263 aa15.92■□□□□ 0.14
PCDHA3-201ENST00000522353 ALPPP05187 535 aa15.92■□□□□ 0.14
PCDHA3-201ENST00000522353 FAM174BQ3ZCQ3 159 aa15.92■□□□□ 0.14
PCDHA3-201ENST00000522353 LCN1P1Q5VSP4 162 aa15.92■□□□□ 0.14
PCDHA3-201ENST00000522353 PLA2G15Q8NCC3 412 aa15.92■□□□□ 0.14
PCDHA3-201ENST00000522353 BADQ92934 168 aa15.92■□□□□ 0.14
PCDHA3-201ENST00000522353 RAB7BQ96AH8 199 aa15.92■□□□□ 0.14
PCDHA3-201ENST00000522353 CAMK1GQ96NX5 476 aa15.92■□□□□ 0.14
PCDHA3-201ENST00000522353 TUBGCP5Q96RT8 1024 aa15.92■□□□□ 0.14
PCDHA3-201ENST00000522353 COQ7Q99807 217 aa15.92■□□□□ 0.14
PCDHA3-201ENST00000522353 TMEM248Q9NWD8 314 aa15.92■□□□□ 0.14
PCDHA3-201ENST00000522353 GPC6Q9Y625 555 aaPredicted RBP15.92■□□□□ 0.14
PCDHA3-201ENST00000522353 COL1A1P02452 1464 aaPredicted RBP15.92■□□□□ 0.14
PCDHA3-201ENST00000522353 KHDRBS3O75525 346 aaKnown RBP15.92■□□□□ 0.14
PCDHA3-201ENST00000522353 CLDN7O95471 211 aa15.92■□□□□ 0.14
PCDHA3-201ENST00000522353 OAS1P00973 400 aaKnown RBP15.92■□□□□ 0.14
PCDHA3-201ENST00000522353 JAG1P78504 1218 aa15.92■□□□□ 0.14
PCDHA3-201ENST00000522353 ARHGAP40Q5TG30 622 aa15.92■□□□□ 0.14
PCDHA3-201ENST00000522353 SLC30A6Q6NXT4 461 aa15.92■□□□□ 0.14
PCDHA3-201ENST00000522353 C1GALT1C1Q96EU7 318 aa15.92■□□□□ 0.14
PCDHA3-201ENST00000522353 LRIG1Q96JA1 1093 aa15.92■□□□□ 0.14
PCDHA3-201ENST00000522353 C16orf70Q9BSU1 422 aa15.92■□□□□ 0.14
PCDHA3-201ENST00000522353 MKKSQ9NPJ1 570 aaPredicted RBP15.92■□□□□ 0.14
PCDHA3-201ENST00000522353 RSL1D1O76021 490 aaKnown RBP15.91■□□□□ 0.14
PCDHA3-201ENST00000522353 PIK3CBP42338 1070 aa15.91■□□□□ 0.14
PCDHA3-201ENST00000522353 PLGLB1Q02325 96 aa15.91■□□□□ 0.14
PCDHA3-201ENST00000522353 CYP1B1Q16678 543 aa15.91■□□□□ 0.14
PCDHA3-201ENST00000522353 LDLRAD1Q5T700 205 aa15.91■□□□□ 0.14
PCDHA3-201ENST00000522353 LRRC66Q68CR7 880 aa15.91■□□□□ 0.14
PCDHA3-201ENST00000522353 TSEN15Q8WW01 171 aaKnown RBP15.91■□□□□ 0.14
PCDHA3-201ENST00000522353 LPGAT1Q92604 370 aa15.91■□□□□ 0.14
PCDHA3-201ENST00000522353 RETREG1Q9H6L5 497 aa15.91■□□□□ 0.14
PCDHA3-201ENST00000522353 ACSS2Q9NR19 701 aa15.91■□□□□ 0.14
PCDHA3-201ENST00000522353 MYO5BQ9ULV0 1848 aa15.91■□□□□ 0.14
PCDHA3-201ENST00000522353 FAUP35544 74 aaKnown RBP15.91■□□□□ 0.14
PCDHA3-201ENST00000522353 NFKB2Q00653 900 aa15.91■□□□□ 0.14
PCDHA3-201ENST00000522353 SPIN4Q56A73 249 aa15.91■□□□□ 0.14
PCDHA3-201ENST00000522353 ZNF783Q6ZMS7 281 aa15.91■□□□□ 0.14
PCDHA3-201ENST00000522353 STRADBQ9C0K7 418 aa15.91■□□□□ 0.14
PCDHA3-201ENST00000522353 CBX5P45973 191 aa15.91■□□□□ 0.14
PCDHA3-201ENST00000522353 HERVK_113P63132 956 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms