RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 AP4E1Q9UPM8 1137 aa8.51□□□□□ -1.05
TRAPPC9-212ENST00000521944 ANK2Q01484 3957 aa8.51□□□□□ -1.05
TRAPPC9-212ENST00000521944 CPAMD8Q8IZJ3 1885 aa8.51□□□□□ -1.05
TRAPPC9-212ENST00000521944 FOXO6A8MYZ6 492 aa8.5□□□□□ -1.05
TRAPPC9-212ENST00000521944 TPOP07202 933 aa8.5□□□□□ -1.05
TRAPPC9-212ENST00000521944 CELA2AP08217 269 aa8.5□□□□□ -1.05
TRAPPC9-212ENST00000521944 PRR35P0CG20 571 aa8.5□□□□□ -1.05
TRAPPC9-212ENST00000521944 SERPINB4P48594 390 aa8.5□□□□□ -1.05
TRAPPC9-212ENST00000521944 EPHB1P54762 984 aa8.5□□□□□ -1.05
TRAPPC9-212ENST00000521944 DLX5P56178 289 aa8.5□□□□□ -1.05
TRAPPC9-212ENST00000521944 HSF1Q00613 529 aa8.5□□□□□ -1.05
TRAPPC9-212ENST00000521944 TMEM115Q12893 351 aaPredicted RBP8.5□□□□□ -1.05
TRAPPC9-212ENST00000521944 OLIG2Q13516 323 aa8.5□□□□□ -1.05
TRAPPC9-212ENST00000521944 TUBB8Q3ZCM7 444 aa8.5□□□□□ -1.05
TRAPPC9-212ENST00000521944 ANKRD20A8PQ5CZ79 823 aa8.5□□□□□ -1.05
TRAPPC9-212ENST00000521944 MARC1Q5VT66 337 aa8.5□□□□□ -1.05
TRAPPC9-212ENST00000521944 ARMC6Q6NXE6 501 aa8.5□□□□□ -1.05
TRAPPC9-212ENST00000521944 OVCH1Q7RTY7 1134 aa8.5□□□□□ -1.05
TRAPPC9-212ENST00000521944 AMZ2Q86W34 360 aa8.5□□□□□ -1.05
TRAPPC9-212ENST00000521944 TRAPPC5Q8IUR0 188 aa8.5□□□□□ -1.05
TRAPPC9-212ENST00000521944 TRAM1L1Q8N609 369 aa8.5□□□□□ -1.05
TRAPPC9-212ENST00000521944 SIRT6Q8N6T7 355 aa8.5□□□□□ -1.05
TRAPPC9-212ENST00000521944 RASGEF1AQ8N9B8 481 aa8.5□□□□□ -1.05
TRAPPC9-212ENST00000521944 MSANTD4Q8NCY6 345 aa8.5□□□□□ -1.05
TRAPPC9-212ENST00000521944 LPCAT1Q8NF37 534 aa8.5□□□□□ -1.05
TRAPPC9-212ENST00000521944 MAGED4Q96JG8 741 aa8.5□□□□□ -1.05
TRAPPC9-212ENST00000521944 SPATA32Q96LK8 384 aa8.5□□□□□ -1.05
TRAPPC9-212ENST00000521944 TRIM51Q9BSJ1 452 aa8.5□□□□□ -1.05
TRAPPC9-212ENST00000521944 CNPY3Q9BT09 278 aa8.5□□□□□ -1.05
TRAPPC9-212ENST00000521944 ZSCAN5AQ9BUG6 496 aa8.5□□□□□ -1.05
TRAPPC9-212ENST00000521944 SNRNP25Q9BV90 132 aaKnown RBP8.5□□□□□ -1.05
TRAPPC9-212ENST00000521944 VPS16Q9H269 839 aa8.5□□□□□ -1.05
TRAPPC9-212ENST00000521944 ZNF160Q9HCG1 818 aa8.5□□□□□ -1.05
TRAPPC9-212ENST00000521944 SAMSN1Q9NSI8 373 aaKnown RBP8.5□□□□□ -1.05
TRAPPC9-212ENST00000521944 PPT2Q9UMR5 302 aa8.5□□□□□ -1.05
TRAPPC9-212ENST00000521944 CTNND2Q9UQB3 1225 aa8.5□□□□□ -1.05
TRAPPC9-212ENST00000521944 ASB1Q9Y576 335 aa8.5□□□□□ -1.05
TRAPPC9-212ENST00000521944 AP1M2Q9Y6Q5 423 aa8.5□□□□□ -1.05
TRAPPC9-212ENST00000521944 TGP01266 2768 aa8.49□□□□□ -1.05
TRAPPC9-212ENST00000521944 VSTM2BA6NLU5 285 aa8.49□□□□□ -1.05
TRAPPC9-212ENST00000521944 ANKRD66B4E2M5 251 aa8.49□□□□□ -1.05
TRAPPC9-212ENST00000521944 INAFM1C9JVW0 142 aa8.49□□□□□ -1.05
TRAPPC9-212ENST00000521944 BTN3A1O00481 513 aa8.49□□□□□ -1.05
TRAPPC9-212ENST00000521944 ZSCAN9O15535 394 aaPredicted RBP8.49□□□□□ -1.05
TRAPPC9-212ENST00000521944 ZWINTO95229 277 aa8.49□□□□□ -1.05
TRAPPC9-212ENST00000521944 PRAMEF1O95521 474 aa8.49□□□□□ -1.05
TRAPPC9-212ENST00000521944 HPP00738 406 aa8.49□□□□□ -1.05
TRAPPC9-212ENST00000521944 HLA-DPA1P20036 260 aa8.49□□□□□ -1.05
TRAPPC9-212ENST00000521944 SPAM1P38567 509 aa8.49□□□□□ -1.05
TRAPPC9-212ENST00000521944 HCAR3P49019 387 aa8.49□□□□□ -1.05
TRAPPC9-212ENST00000521944 DCDC1P59894 354 aa8.49□□□□□ -1.05
TRAPPC9-212ENST00000521944 ATP13A5Q4VNC0 1218 aa8.49□□□□□ -1.05
TRAPPC9-212ENST00000521944 KRTCAP3Q53RY4 240 aa8.49□□□□□ -1.05
TRAPPC9-212ENST00000521944 FAM182AQ5T1J6 154 aa8.49□□□□□ -1.05
TRAPPC9-212ENST00000521944 ERMARDQ5T6L9 678 aa8.49□□□□□ -1.05
TRAPPC9-212ENST00000521944 ATG9BQ674R7 924 aa8.49□□□□□ -1.05
TRAPPC9-212ENST00000521944 TMC3Q7Z5M5 1100 aa8.49□□□□□ -1.05
TRAPPC9-212ENST00000521944 WFDC8Q8IUA0 241 aa8.49□□□□□ -1.05
TRAPPC9-212ENST00000521944 GPR135Q8IZ08 494 aa8.49□□□□□ -1.05
TRAPPC9-212ENST00000521944 DTWD1Q8N5C7 304 aa8.49□□□□□ -1.05
TRAPPC9-212ENST00000521944 LILRA3Q8N6C8 439 aaPredicted RBP8.49□□□□□ -1.05
TRAPPC9-212ENST00000521944 C3orf20Q8ND61 904 aa8.49□□□□□ -1.05
TRAPPC9-212ENST00000521944 ANKRD20A12PQ8NF67 263 aa8.49□□□□□ -1.05
TRAPPC9-212ENST00000521944 NAT14Q8WUY8 206 aa8.49□□□□□ -1.05
TRAPPC9-212ENST00000521944 TEKT4Q8WW24 435 aa8.49□□□□□ -1.05
TRAPPC9-212ENST00000521944 SMARCE1Q969G3 411 aa8.49□□□□□ -1.05
TRAPPC9-212ENST00000521944 C8orf44Q96CB5 159 aa8.49□□□□□ -1.05
TRAPPC9-212ENST00000521944 MCEEQ96PE7 176 aa8.49□□□□□ -1.05
TRAPPC9-212ENST00000521944 GPATCH1Q9BRR8 931 aaKnown RBP8.49□□□□□ -1.05
TRAPPC9-212ENST00000521944 POLDIP3Q9BY77 421 aaKnown RBP8.49□□□□□ -1.05
TRAPPC9-212ENST00000521944 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.49□□□□□ -1.05
TRAPPC9-212ENST00000521944 WWP1Q9H0M0 922 aa8.49□□□□□ -1.05
TRAPPC9-212ENST00000521944 SLC26A1Q9H2B4 701 aa8.49□□□□□ -1.05
TRAPPC9-212ENST00000521944 SOX17Q9H6I2 414 aaPredicted RBP8.49□□□□□ -1.05
TRAPPC9-212ENST00000521944 WDR54Q9H977 334 aa8.49□□□□□ -1.05
TRAPPC9-212ENST00000521944 PCDH9Q9HC56 1237 aa8.49□□□□□ -1.05
TRAPPC9-212ENST00000521944 LRFN1Q9P244 771 aa8.49□□□□□ -1.05
TRAPPC9-212ENST00000521944 NFKBIL1Q9UBC1 381 aaPredicted RBP8.49□□□□□ -1.05
TRAPPC9-212ENST00000521944 CTSFQ9UBX1 484 aa8.49□□□□□ -1.05
TRAPPC9-212ENST00000521944 DNPEPQ9ULA0 475 aa8.49□□□□□ -1.05
TRAPPC9-212ENST00000521944 L3MBTL1Q9Y468 752 aa8.49□□□□□ -1.05
TRAPPC9-212ENST00000521944 MEGF8Q7Z7M0 2845 aa8.48□□□□□ -1.05
TRAPPC9-212ENST00000521944 GSAPA4D1B5 854 aa8.48□□□□□ -1.05
TRAPPC9-212ENST00000521944 FAM90A27PA6NNH2 459 aa8.48□□□□□ -1.05
TRAPPC9-212ENST00000521944 NPIPA5E9PKD4 350 aa8.48□□□□□ -1.05
TRAPPC9-212ENST00000521944 J3QW42 95 aa8.48□□□□□ -1.05
TRAPPC9-212ENST00000521944 GPR39O43194 453 aa8.48□□□□□ -1.05
TRAPPC9-212ENST00000521944 DAPK3O43293 454 aa8.48□□□□□ -1.05
TRAPPC9-212ENST00000521944 NDUFB5O43674 189 aa8.48□□□□□ -1.05
TRAPPC9-212ENST00000521944 KCNJ13O60928 360 aa8.48□□□□□ -1.05
TRAPPC9-212ENST00000521944 MMP2P08253 660 aa8.48□□□□□ -1.05
TRAPPC9-212ENST00000521944 PIRTP0C851 137 aa8.48□□□□□ -1.05
TRAPPC9-212ENST00000521944 VCLP18206 1134 aa8.48□□□□□ -1.05
TRAPPC9-212ENST00000521944 DNASE1P24855 282 aa8.48□□□□□ -1.05
TRAPPC9-212ENST00000521944 DGKQP52824 942 aa8.48□□□□□ -1.05
TRAPPC9-212ENST00000521944 RPL26P61254 145 aaKnown RBP8.48□□□□□ -1.05
TRAPPC9-212ENST00000521944 CDR2Q01850 454 aa8.48□□□□□ -1.05
TRAPPC9-212ENST00000521944 MYBPHQ13203 477 aa8.48□□□□□ -1.05
TRAPPC9-212ENST00000521944 XRCC4Q13426 336 aa8.48□□□□□ -1.05
TRAPPC9-212ENST00000521944 STIM1Q13586 685 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms