RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 MICALCLQ6ZW33 695 aa9.16□□□□□ -0.94
CLK4-209ENST00000521621 ZNF761Q86XN6 746 aaPredicted RBP9.16□□□□□ -0.94
CLK4-209ENST00000521621 TGM7Q96PF1 710 aa9.16□□□□□ -0.94
CLK4-209ENST00000521621 TRAPPC9Q96Q05 1148 aa9.16□□□□□ -0.94
CLK4-209ENST00000521621 DPH2Q9BQC3 489 aaPredicted RBP9.16□□□□□ -0.94
CLK4-209ENST00000521621 TRIM56Q9BRZ2 755 aaKnown RBP9.16□□□□□ -0.94
CLK4-209ENST00000521621 LRRC1Q9BTT6 524 aa9.16□□□□□ -0.94
CLK4-209ENST00000521621 SLC12A9Q9BXP2 914 aa9.16□□□□□ -0.94
CLK4-209ENST00000521621 SYNDIG1Q9H7V2 258 aa9.16□□□□□ -0.94
CLK4-209ENST00000521621 FBXO6Q9NRD1 293 aaPredicted RBP9.16□□□□□ -0.94
CLK4-209ENST00000521621 OCIAD1Q9NX40 245 aa9.16□□□□□ -0.94
CLK4-209ENST00000521621 PISDQ9UG56 409 aa9.16□□□□□ -0.94
CLK4-209ENST00000521621 PCDHGA6Q9Y5G7 932 aa9.16□□□□□ -0.94
CLK4-209ENST00000521621 IGHV5-51A0A0C4DH38 117 aa9.15□□□□□ -0.94
CLK4-209ENST00000521621 PIPSLA2A3N6 862 aa9.15□□□□□ -0.94
CLK4-209ENST00000521621 TERTO14746 1132 aaKnown RBP9.15□□□□□ -0.94
CLK4-209ENST00000521621 ZNF500O60304 480 aaPredicted RBP9.15□□□□□ -0.94
CLK4-209ENST00000521621 CATP04040 527 aaKnown RBP9.15□□□□□ -0.94
CLK4-209ENST00000521621 ERVK-10P10266 1014 aa9.15□□□□□ -0.94
CLK4-209ENST00000521621 CHRM3P20309 590 aa9.15□□□□□ -0.94
CLK4-209ENST00000521621 TNFRSF8P28908 595 aa9.15□□□□□ -0.94
CLK4-209ENST00000521621 CARSP49589 748 aaKnown RBP9.15□□□□□ -0.94
CLK4-209ENST00000521621 ABATP80404 500 aa9.15□□□□□ -0.94
CLK4-209ENST00000521621 POU4F1Q01851 419 aa9.15□□□□□ -0.94
CLK4-209ENST00000521621 CNSTQ6PJW8 725 aa9.15□□□□□ -0.94
CLK4-209ENST00000521621 ZNF517Q6ZMY9 492 aaPredicted RBP9.15□□□□□ -0.94
CLK4-209ENST00000521621 ZC3HC1Q86WB0 502 aaKnown RBP9.15□□□□□ -0.94
CLK4-209ENST00000521621 LRRC56Q8IYG6 542 aaPredicted RBP9.15□□□□□ -0.94
CLK4-209ENST00000521621 OTUD6BQ8N6M0 293 aa9.15□□□□□ -0.94
CLK4-209ENST00000521621 SIDT2Q8NBJ9 832 aaKnown RBP9.15□□□□□ -0.94
CLK4-209ENST00000521621 OR9A1PQ8NGU1 263 aa9.15□□□□□ -0.94
CLK4-209ENST00000521621 DENND1AQ8TEH3 1009 aa9.15□□□□□ -0.94
CLK4-209ENST00000521621 ZNF501Q96CX3 271 aaPredicted RBP9.15□□□□□ -0.94
CLK4-209ENST00000521621 PILRAQ9UKJ1 303 aa9.15□□□□□ -0.94
CLK4-209ENST00000521621 CRYL1Q9Y2S2 319 aa9.15□□□□□ -0.94
CLK4-209ENST00000521621 ASXL3Q9C0F0 2248 aa9.15□□□□□ -0.94
CLK4-209ENST00000521621 IQCF5A8MTL0 148 aa9.15□□□□□ -0.95
CLK4-209ENST00000521621 MAP3K7O43318 606 aa9.15□□□□□ -0.95
CLK4-209ENST00000521621 CCNDBP1O95273 360 aa9.15□□□□□ -0.95
CLK4-209ENST00000521621 HBQ1P09105 142 aa9.15□□□□□ -0.95
CLK4-209ENST00000521621 CCL4P13236 92 aa9.15□□□□□ -0.95
CLK4-209ENST00000521621 UGT2B7P16662 529 aa9.15□□□□□ -0.95
CLK4-209ENST00000521621 TYRP1P17643 537 aa9.15□□□□□ -0.95
CLK4-209ENST00000521621 CCND1P24385 295 aa9.15□□□□□ -0.95
CLK4-209ENST00000521621 TMPRSS3P57727 454 aa9.15□□□□□ -0.95
CLK4-209ENST00000521621 MPP1Q00013 466 aa9.15□□□□□ -0.95
CLK4-209ENST00000521621 TLE3Q04726 772 aa9.15□□□□□ -0.95
CLK4-209ENST00000521621 ACSBG2Q5FVE4 666 aa9.15□□□□□ -0.95
CLK4-209ENST00000521621 GRTP1Q5TC63 336 aa9.15□□□□□ -0.95
CLK4-209ENST00000521621 IRGCQ6NXR0 463 aa9.15□□□□□ -0.95
CLK4-209ENST00000521621 ZBED8Q8IZ13 594 aa9.15□□□□□ -0.95
CLK4-209ENST00000521621 ESX1Q8N693 406 aa9.15□□□□□ -0.95
CLK4-209ENST00000521621 OR4E2Q8NGC2 313 aa9.15□□□□□ -0.95
CLK4-209ENST00000521621 FBXO25Q8TCJ0 367 aa9.15□□□□□ -0.95
CLK4-209ENST00000521621 MAP3K3Q99759 626 aa9.15□□□□□ -0.95
CLK4-209ENST00000521621 PCBD2Q9H0N5 130 aa9.15□□□□□ -0.95
CLK4-209ENST00000521621 FANCEQ9HB96 536 aa9.15□□□□□ -0.95
CLK4-209ENST00000521621 ZFATQ9P243 1243 aa9.15□□□□□ -0.95
CLK4-209ENST00000521621 MTRF1LQ9UGC7 380 aaKnown RBP9.15□□□□□ -0.95
CLK4-209ENST00000521621 TRMT6Q9UJA5 497 aaKnown RBP9.15□□□□□ -0.95
CLK4-209ENST00000521621 RAXQ9Y2V3 346 aa9.15□□□□□ -0.95
CLK4-209ENST00000521621 VWA7Q9Y334 891 aa9.15□□□□□ -0.95
CLK4-209ENST00000521621 KMT2BQ9UMN6 2715 aaPredicted RBP9.15□□□□□ -0.95
CLK4-209ENST00000521621 GOLGA8KD6RF30 607 aa9.14□□□□□ -0.95
CLK4-209ENST00000521621 GOLGA8TH3BQL2 631 aa9.14□□□□□ -0.95
CLK4-209ENST00000521621 POLR1CO15160 346 aaPredicted RBP9.14□□□□□ -0.95
CLK4-209ENST00000521621 TSPAN12O95859 305 aa9.14□□□□□ -0.95
CLK4-209ENST00000521621 OAS2P29728 719 aaKnown RBP9.14□□□□□ -0.95
CLK4-209ENST00000521621 PEBP1P30086 187 aaKnown RBP9.14□□□□□ -0.95
CLK4-209ENST00000521621 MAGEA4P43358 317 aa9.14□□□□□ -0.95
CLK4-209ENST00000521621 AP1S2P56377 157 aa9.14□□□□□ -0.95
CLK4-209ENST00000521621 GPX6P59796 221 aa9.14□□□□□ -0.95
CLK4-209ENST00000521621 HECTD2Q5U5R9 776 aa9.14□□□□□ -0.95
CLK4-209ENST00000521621 TRMT10BQ6PF06 316 aaKnown RBP9.14□□□□□ -0.95
CLK4-209ENST00000521621 SPACA3Q8IXA5 215 aa9.14□□□□□ -0.95
CLK4-209ENST00000521621 DNAJC22Q8N4W6 341 aa9.14□□□□□ -0.95
CLK4-209ENST00000521621 NKAPQ8N5F7 415 aaKnown RBP9.14□□□□□ -0.95
CLK4-209ENST00000521621 LINC01555Q8NAE3 123 aa9.14□□□□□ -0.95
CLK4-209ENST00000521621 TSPAN17Q96FV3 270 aa9.14□□□□□ -0.95
CLK4-209ENST00000521621 CCDC138Q96M89 665 aa9.14□□□□□ -0.95
CLK4-209ENST00000521621 GPR21Q99679 349 aa9.14□□□□□ -0.95
CLK4-209ENST00000521621 GPR22Q99680 433 aa9.14□□□□□ -0.95
CLK4-209ENST00000521621 DPH5Q9H2P9 285 aa9.14□□□□□ -0.95
CLK4-209ENST00000521621 SAYSD1Q9NPB0 183 aa9.14□□□□□ -0.95
CLK4-209ENST00000521621 FOXJ2Q9P0K8 574 aa9.14□□□□□ -0.95
CLK4-209ENST00000521621 GALPQ9UBC7 116 aa9.14□□□□□ -0.95
CLK4-209ENST00000521621 FETUBQ9UGM5 382 aa9.14□□□□□ -0.95
CLK4-209ENST00000521621 CFAP20Q9Y6A4 193 aaKnown RBP9.14□□□□□ -0.95
CLK4-209ENST00000521621 A0A1W2PPV9 198 aa9.14□□□□□ -0.95
CLK4-209ENST00000521621 FITM1A5D6W6 292 aa9.14□□□□□ -0.95
CLK4-209ENST00000521621 BANF1O75531 89 aa9.14□□□□□ -0.95
CLK4-209ENST00000521621 CD63P08962 238 aa9.14□□□□□ -0.95
CLK4-209ENST00000521621 ECHS1P30084 290 aa9.14□□□□□ -0.95
CLK4-209ENST00000521621 ZKSCAN8Q15776 578 aaPredicted RBP9.14□□□□□ -0.95
CLK4-209ENST00000521621 KLHL38Q2WGJ6 581 aa9.14□□□□□ -0.95
CLK4-209ENST00000521621 PALM2Q8IXS6 379 aa9.14□□□□□ -0.95
CLK4-209ENST00000521621 C19orf47Q8N9M1 422 aaKnown RBP9.14□□□□□ -0.95
CLK4-209ENST00000521621 RCBTB1Q8NDN9 531 aa9.14□□□□□ -0.95
CLK4-209ENST00000521621 SMPDL3AQ92484 453 aa9.14□□□□□ -0.95
CLK4-209ENST00000521621 NKD1Q969G9 470 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms