RNA–Protein interactions for RNA: ENST00000520991.3

CLN8-205, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5 BASIC

Gene CLN8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-205ENST00000520991 PDGFAP04085 211 aa15.27■□□□□ 0.04
CLN8-205ENST00000520991 CAPN1P07384 714 aa15.27■□□□□ 0.04
CLN8-205ENST00000520991 TPBGLP0DKB5 382 aa15.27■□□□□ 0.04
CLN8-205ENST00000520991 ATXN8OSP0DMR3 200 aa15.27■□□□□ 0.04
CLN8-205ENST00000520991 RAB28P51157 221 aa15.27■□□□□ 0.04
CLN8-205ENST00000520991 ZIC1Q15915 447 aa15.27■□□□□ 0.04
CLN8-205ENST00000520991 SLC5A12Q1EHB4 618 aa15.27■□□□□ 0.04
CLN8-205ENST00000520991 VRK3Q8IV63 474 aa15.27■□□□□ 0.04
CLN8-205ENST00000520991 DCUN1D3Q8IWE4 304 aa15.27■□□□□ 0.04
CLN8-205ENST00000520991 KRT222Q8N1A0 295 aa15.27■□□□□ 0.04
CLN8-205ENST00000520991 LKAAEAR1Q8TD35 194 aa15.27■□□□□ 0.04
CLN8-205ENST00000520991 C17orf62Q9BQA9 187 aa15.27■□□□□ 0.04
CLN8-205ENST00000520991 CHRNA10Q9GZZ6 450 aa15.27■□□□□ 0.04
CLN8-205ENST00000520991 BFARQ9NZS9 450 aa15.27■□□□□ 0.04
CLN8-205ENST00000520991 MARCH4Q9P2E8 410 aaPredicted RBP15.27■□□□□ 0.04
CLN8-205ENST00000520991 GPN3Q9UHW5 284 aaPredicted RBP15.27■□□□□ 0.04
CLN8-205ENST00000520991 GNPTGQ9UJJ9 305 aa15.27■□□□□ 0.04
CLN8-205ENST00000520991 G3BP2Q9UN86 482 aaKnown RBP15.27■□□□□ 0.04
CLN8-205ENST00000520991 COL12A1Q99715 3063 aa15.27■□□□□ 0.03
CLN8-205ENST00000520991 SPTBP11277 2137 aa15.27■□□□□ 0.03
CLN8-205ENST00000520991 ZSCAN9O15535 394 aaPredicted RBP15.26■□□□□ 0.03
CLN8-205ENST00000520991 CEP104O60308 925 aa15.26■□□□□ 0.03
CLN8-205ENST00000520991 GPC4O75487 556 aa15.26■□□□□ 0.03
CLN8-205ENST00000520991 NDUFS3O75489 264 aa15.26■□□□□ 0.03
CLN8-205ENST00000520991 TMEM63AO94886 807 aa15.26■□□□□ 0.03
CLN8-205ENST00000520991 PEBP1P30086 187 aaKnown RBP15.26■□□□□ 0.03
CLN8-205ENST00000520991 PKLRP30613 574 aa15.26■□□□□ 0.03
CLN8-205ENST00000520991 KYNUQ16719 465 aa15.26■□□□□ 0.03
CLN8-205ENST00000520991 C1orf189Q5VU69 101 aa15.26■□□□□ 0.03
CLN8-205ENST00000520991 UNC5DQ6UXZ4 953 aa15.26■□□□□ 0.03
CLN8-205ENST00000520991 ZNF662Q6ZS27 426 aa15.26■□□□□ 0.03
CLN8-205ENST00000520991 TRIM58Q8NG06 486 aa15.26■□□□□ 0.03
CLN8-205ENST00000520991 FLVCR1-AS1Q8TAF5 88 aa15.26■□□□□ 0.03
CLN8-205ENST00000520991 ADAMTS17Q8TE56 1095 aa15.26■□□□□ 0.03
CLN8-205ENST00000520991 PANX3Q96QZ0 392 aa15.26■□□□□ 0.03
CLN8-205ENST00000520991 DHRS4Q9BTZ2 278 aa15.26■□□□□ 0.03
CLN8-205ENST00000520991 SPRTNQ9H040 489 aaPredicted RBP15.26■□□□□ 0.03
CLN8-205ENST00000520991 TXLNGQ9NUQ3 528 aa15.26■□□□□ 0.03
CLN8-205ENST00000520991 CIDEBQ9UHD4 219 aa15.26■□□□□ 0.03
CLN8-205ENST00000520991 CDYLQ9Y232 598 aa15.26■□□□□ 0.03
CLN8-205ENST00000520991 PLAAQ9Y263 795 aa15.26■□□□□ 0.03
CLN8-205ENST00000520991 PCDHGA9Q9Y5G4 932 aaKnown RBP15.26■□□□□ 0.03
CLN8-205ENST00000520991 HCRTR1O43613 425 aa15.25■□□□□ 0.03
CLN8-205ENST00000520991 AOAHP28039 575 aa15.25■□□□□ 0.03
CLN8-205ENST00000520991 NMBRP28336 390 aa15.25■□□□□ 0.03
CLN8-205ENST00000520991 KCNJ1P48048 391 aa15.25■□□□□ 0.03
CLN8-205ENST00000520991 NPY2RP49146 381 aa15.25■□□□□ 0.03
CLN8-205ENST00000520991 MLLT10P55197 1068 aa15.25■□□□□ 0.03
CLN8-205ENST00000520991 MLIPQ5VWP3 458 aa15.25■□□□□ 0.03
CLN8-205ENST00000520991 ZNF385CQ66K41 422 aaPredicted RBP15.25■□□□□ 0.03
CLN8-205ENST00000520991 RHBDD2Q6NTF9 364 aa15.25■□□□□ 0.03
CLN8-205ENST00000520991 TLDC1Q6P9B6 456 aa15.25■□□□□ 0.03
CLN8-205ENST00000520991 TTC23LQ6PF05 361 aa15.25■□□□□ 0.03
CLN8-205ENST00000520991 TAX1BP1Q86VP1 789 aa15.25■□□□□ 0.03
CLN8-205ENST00000520991 LRRC6Q86X45 466 aa15.25■□□□□ 0.03
CLN8-205ENST00000520991 RAB43Q86YS6 212 aa15.25■□□□□ 0.03
CLN8-205ENST00000520991 MPP5Q8N3R9 675 aa15.25■□□□□ 0.03
CLN8-205ENST00000520991 C2orf73Q8N5S3 287 aaPredicted RBP15.25■□□□□ 0.03
CLN8-205ENST00000520991 ZNF655Q8N720 491 aaPredicted RBP15.25■□□□□ 0.03
CLN8-205ENST00000520991 LINC01555Q8NAE3 123 aa15.25■□□□□ 0.03
CLN8-205ENST00000520991 PROKR1Q8TCW9 393 aa15.25■□□□□ 0.03
CLN8-205ENST00000520991 SKA2Q8WVK7 121 aaPredicted RBP15.25■□□□□ 0.03
CLN8-205ENST00000520991 SLC22A18Q96BI1 424 aa15.25■□□□□ 0.03
CLN8-205ENST00000520991 HOMER3Q9NSC5 361 aa15.25■□□□□ 0.03
CLN8-205ENST00000520991 TREX1Q9NSU2 369 aa15.25■□□□□ 0.03
CLN8-205ENST00000520991 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.25■□□□□ 0.03
CLN8-205ENST00000520991 NDOR1Q9UHB4 597 aa15.25■□□□□ 0.03
CLN8-205ENST00000520991 SLC39A10Q9ULF5 831 aa15.25■□□□□ 0.03
CLN8-205ENST00000520991 SRPK3Q9UPE1 567 aa15.25■□□□□ 0.03
CLN8-205ENST00000520991 PLCL2Q9UPR0 1127 aa15.25■□□□□ 0.03
CLN8-205ENST00000520991 RELNP78509 3460 aa15.25■□□□□ 0.03
CLN8-205ENST00000520991 KPNA5O15131 536 aa15.24■□□□□ 0.03
CLN8-205ENST00000520991 NRDCO43847 1150 aa15.24■□□□□ 0.03
CLN8-205ENST00000520991 SLCO2B1O94956 709 aa15.24■□□□□ 0.03
CLN8-205ENST00000520991 CBSLP0DN79 551 aa15.24■□□□□ 0.03
CLN8-205ENST00000520991 MAGP20916 626 aa15.24■□□□□ 0.03
CLN8-205ENST00000520991 MGAT1P26572 445 aa15.24■□□□□ 0.03
CLN8-205ENST00000520991 OTX2P32243 289 aa15.24■□□□□ 0.03
CLN8-205ENST00000520991 CXCR5P32302 372 aa15.24■□□□□ 0.03
CLN8-205ENST00000520991 CBSP35520 551 aa15.24■□□□□ 0.03
CLN8-205ENST00000520991 GABRA4P48169 554 aa15.24■□□□□ 0.03
CLN8-205ENST00000520991 TERF1P54274 439 aa15.24■□□□□ 0.03
CLN8-205ENST00000520991 RRADP55042 308 aa15.24■□□□□ 0.03
CLN8-205ENST00000520991 EIF3BP55884 814 aaKnown RBP15.24■□□□□ 0.03
CLN8-205ENST00000520991 DCDP81605 110 aaKnown RBP15.24■□□□□ 0.03
CLN8-205ENST00000520991 CDK16Q00536 496 aa15.24■□□□□ 0.03
CLN8-205ENST00000520991 ATP1A4Q13733 1029 aa15.24■□□□□ 0.03
CLN8-205ENST00000520991 OTOAQ7RTW8 1153 aa15.24■□□□□ 0.03
CLN8-205ENST00000520991 ATCAYQ86WG3 371 aa15.24■□□□□ 0.03
CLN8-205ENST00000520991 FAM20CQ8IXL6 584 aa15.24■□□□□ 0.03
CLN8-205ENST00000520991 DNAJC22Q8N4W6 341 aa15.24■□□□□ 0.03
CLN8-205ENST00000520991 ZBTB2Q8N680 514 aa15.24■□□□□ 0.03
CLN8-205ENST00000520991 TMEM102Q8N9M5 508 aaPredicted RBP15.24■□□□□ 0.03
CLN8-205ENST00000520991 IL17FQ96PD4 163 aa15.24■□□□□ 0.03
CLN8-205ENST00000520991 NDC1Q9BTX1 674 aa15.24■□□□□ 0.03
CLN8-205ENST00000520991 INTS7Q9NVH2 962 aaKnown RBP15.24■□□□□ 0.03
CLN8-205ENST00000520991 SYBUQ9NX95 663 aa15.24■□□□□ 0.03
CLN8-205ENST00000520991 IFT80Q9P2H3 777 aaPredicted RBP15.24■□□□□ 0.03
CLN8-205ENST00000520991 DHCR7Q9UBM7 475 aaKnown RBP15.24■□□□□ 0.03
CLN8-205ENST00000520991 TTC7AQ9ULT0 858 aaPredicted RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms