RNA–Protein interactions for RNA: ENST00000520400.5

CTNNA1-222, Transcript of catenin alpha 1, human

TSL 4

Gene CTNNA1, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-222	ENST00000520400	TMEM139	Q8IV31	216 aa		4.2	□□□□□ -1.74
CTNNA1-222	ENST00000520400	MAPKAPK5-AS1	Q8N8E1	139 aa		4.2	□□□□□ -1.74
CTNNA1-222	ENST00000520400	DMBX1	Q8NFW5	382 aa		4.2	□□□□□ -1.74
CTNNA1-222	ENST00000520400	KIF18A	Q8NI77	898 aa		4.2	□□□□□ -1.74
CTNNA1-222	ENST00000520400	SSMEM1	Q8WWF3	244 aa		4.2	□□□□□ -1.74
CTNNA1-222	ENST00000520400	IRGQ	Q8WZA9	623 aa		4.2	□□□□□ -1.74
CTNNA1-222	ENST00000520400	HSD17B8	Q92506	261 aa		4.2	□□□□□ -1.74
CTNNA1-222	ENST00000520400	SYN2	Q92777	582 aa	Predicted RBP	4.2	□□□□□ -1.74
CTNNA1-222	ENST00000520400	SLAMF9	Q96A28	289 aa		4.2	□□□□□ -1.74
CTNNA1-222	ENST00000520400	LRRC3B	Q96PB8	259 aa		4.2	□□□□□ -1.74
CTNNA1-222	ENST00000520400	FEV	Q99581	238 aa		4.2	□□□□□ -1.74
CTNNA1-222	ENST00000520400	FKRP	Q9H9S5	495 aa		4.2	□□□□□ -1.74
CTNNA1-222	ENST00000520400	DNAJC4	Q9NNZ3	241 aa		4.2	□□□□□ -1.74
CTNNA1-222	ENST00000520400	ZNF112	Q9UJU3	913 aa		4.2	□□□□□ -1.74
CTNNA1-222	ENST00000520400	JRKL	Q9Y4A0	524 aa		4.2	□□□□□ -1.74
CTNNA1-222	ENST00000520400	TOPBP1	Q92547	1522 aa		4.2	□□□□□ -1.74
CTNNA1-222	ENST00000520400	PPRC1	Q5VV67	1664 aa	Known RBP	4.19	□□□□□ -1.74
CTNNA1-222	ENST00000520400		A0A1W2PRB8	838 aa		4.19	□□□□□ -1.74
CTNNA1-222	ENST00000520400	MED19	A0JLT2	244 aa	Predicted RBP	4.19	□□□□□ -1.74
CTNNA1-222	ENST00000520400	PRR32	B1ATL7	298 aa		4.19	□□□□□ -1.74
CTNNA1-222	ENST00000520400	P2RY10	O00398	339 aa		4.19	□□□□□ -1.74
CTNNA1-222	ENST00000520400	CLIC2	O15247	247 aa		4.19	□□□□□ -1.74
CTNNA1-222	ENST00000520400	TSPAN1	O60635	241 aa		4.19	□□□□□ -1.74
CTNNA1-222	ENST00000520400	IGLV2-11	P01706	119 aa		4.19	□□□□□ -1.74
CTNNA1-222	ENST00000520400	IGHV2-70	P01814	119 aa		4.19	□□□□□ -1.74
CTNNA1-222	ENST00000520400	NR3C1	P04150	777 aa		4.19	□□□□□ -1.74
CTNNA1-222	ENST00000520400	CCDC175	P0C221	793 aa		4.19	□□□□□ -1.74
CTNNA1-222	ENST00000520400	HAPLN1	P10915	354 aa	Predicted RBP	4.19	□□□□□ -1.74
CTNNA1-222	ENST00000520400	HSPA8	P11142	646 aa	Known RBP	4.19	□□□□□ -1.74
CTNNA1-222	ENST00000520400	PCGF2	P35227	344 aa		4.19	□□□□□ -1.74
CTNNA1-222	ENST00000520400	PTGER4	P35408	488 aa		4.19	□□□□□ -1.74
CTNNA1-222	ENST00000520400	TIMP3	P35625	211 aa		4.19	□□□□□ -1.74
CTNNA1-222	ENST00000520400	MTHFR	P42898	656 aa		4.19	□□□□□ -1.74
CTNNA1-222	ENST00000520400	LIMK1	P53667	647 aa		4.19	□□□□□ -1.74
CTNNA1-222	ENST00000520400	DVL1P1	P54792	670 aa	Predicted RBP	4.19	□□□□□ -1.74
CTNNA1-222	ENST00000520400	CDH11	P55287	796 aa		4.19	□□□□□ -1.74
CTNNA1-222	ENST00000520400	PPARD	Q03181	441 aa		4.19	□□□□□ -1.74
CTNNA1-222	ENST00000520400	GAGE5	Q13069	117 aa		4.19	□□□□□ -1.74
CTNNA1-222	ENST00000520400	GAGE6	Q13070	117 aa		4.19	□□□□□ -1.74
CTNNA1-222	ENST00000520400	TNIP1	Q15025	636 aa		4.19	□□□□□ -1.74
CTNNA1-222	ENST00000520400	KRTAP24-1	Q3LI83	254 aa		4.19	□□□□□ -1.74
CTNNA1-222	ENST00000520400	PLA2G4F	Q68DD2	849 aa		4.19	□□□□□ -1.74
CTNNA1-222	ENST00000520400	CHST3	Q7LGC8	479 aa		4.19	□□□□□ -1.74
CTNNA1-222	ENST00000520400	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	4.19	□□□□□ -1.74
CTNNA1-222	ENST00000520400	EXOC3L1	Q86VI1	746 aa		4.19	□□□□□ -1.74
CTNNA1-222	ENST00000520400	VSIG1	Q86XK7	387 aa		4.19	□□□□□ -1.74
CTNNA1-222	ENST00000520400	GPALPP1	Q8IXQ4	340 aa		4.19	□□□□□ -1.74
CTNNA1-222	ENST00000520400	CFAP206	Q8IYR0	622 aa		4.19	□□□□□ -1.74
CTNNA1-222	ENST00000520400	NKAIN3	Q8N8D7	197 aa		4.19	□□□□□ -1.74
CTNNA1-222	ENST00000520400	SPSB1	Q96BD6	273 aa		4.19	□□□□□ -1.74
CTNNA1-222	ENST00000520400	SGK494	Q96LW2	274 aa		4.19	□□□□□ -1.74
CTNNA1-222	ENST00000520400	SFXN2	Q96NB2	322 aa		4.19	□□□□□ -1.74
CTNNA1-222	ENST00000520400	FNBP1	Q96RU3	617 aa		4.19	□□□□□ -1.74
CTNNA1-222	ENST00000520400	NODAL	Q96S42	347 aa		4.19	□□□□□ -1.74
CTNNA1-222	ENST00000520400	MYADM	Q96S97	322 aa		4.19	□□□□□ -1.74
CTNNA1-222	ENST00000520400	RAD9A	Q99638	391 aa		4.19	□□□□□ -1.74
CTNNA1-222	ENST00000520400	RTP3	Q9BQQ7	232 aa		4.19	□□□□□ -1.74
CTNNA1-222	ENST00000520400	PIGQ	Q9BRB3	760 aa		4.19	□□□□□ -1.74
CTNNA1-222	ENST00000520400	SLC25A23	Q9BV35	468 aa		4.19	□□□□□ -1.74
CTNNA1-222	ENST00000520400	KATNB1	Q9BVA0	655 aa		4.19	□□□□□ -1.74
CTNNA1-222	ENST00000520400	OLFML3	Q9NRN5	406 aa		4.19	□□□□□ -1.74
CTNNA1-222	ENST00000520400	MRGBP	Q9NV56	204 aa		4.19	□□□□□ -1.74
CTNNA1-222	ENST00000520400	DPP3	Q9NY33	737 aa		4.19	□□□□□ -1.74
CTNNA1-222	ENST00000520400	TMED3	Q9Y3Q3	217 aa		4.19	□□□□□ -1.74
CTNNA1-222	ENST00000520400	GRIP1	Q9Y3R0	1128 aa		4.19	□□□□□ -1.74
CTNNA1-222	ENST00000520400	ARID2	Q68CP9	1835 aa		4.18	□□□□□ -1.74
CTNNA1-222	ENST00000520400	SETD1A	O15047	1707 aa	Known RBP	4.18	□□□□□ -1.74
CTNNA1-222	ENST00000520400	BIVM-ERCC5	R4GMW8	1640 aa		4.18	□□□□□ -1.74
CTNNA1-222	ENST00000520400	CUX1	P39880	1505 aa		4.18	□□□□□ -1.74
CTNNA1-222	ENST00000520400	DUXA	A6NLW8	204 aa		4.18	□□□□□ -1.74
CTNNA1-222	ENST00000520400	LMX1B	O60663	402 aa		4.18	□□□□□ -1.74
CTNNA1-222	ENST00000520400	CSN3	P07498	182 aa		4.18	□□□□□ -1.74
CTNNA1-222	ENST00000520400	FGF5	P12034	268 aa		4.18	□□□□□ -1.74
CTNNA1-222	ENST00000520400	IFNAR1	P17181	557 aa		4.18	□□□□□ -1.74
CTNNA1-222	ENST00000520400	CA4	P22748	312 aa		4.18	□□□□□ -1.74
CTNNA1-222	ENST00000520400	LHX1	P48742	406 aa		4.18	□□□□□ -1.74
CTNNA1-222	ENST00000520400	SLC9A3	P48764	834 aa		4.18	□□□□□ -1.74
CTNNA1-222	ENST00000520400	HOXA1	P49639	335 aa	Predicted RBP	4.18	□□□□□ -1.74
CTNNA1-222	ENST00000520400	ROR1	Q01973	937 aa		4.18	□□□□□ -1.74
CTNNA1-222	ENST00000520400	LGALS3BP	Q08380	585 aa		4.18	□□□□□ -1.74
CTNNA1-222	ENST00000520400	DMP1	Q13316	513 aa	Predicted RBP	4.18	□□□□□ -1.74
CTNNA1-222	ENST00000520400	ITGA7	Q13683	1181 aa		4.18	□□□□□ -1.74
CTNNA1-222	ENST00000520400	ITPRIPL2	Q3MIP1	535 aa		4.18	□□□□□ -1.74
CTNNA1-222	ENST00000520400	UGT3A2	Q3SY77	523 aa		4.18	□□□□□ -1.74
CTNNA1-222	ENST00000520400	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	4.18	□□□□□ -1.74
CTNNA1-222	ENST00000520400	FAM133B	Q5BKY9	247 aa	Known RBP	4.18	□□□□□ -1.74
CTNNA1-222	ENST00000520400	MFSD12	Q6NUT3	480 aa		4.18	□□□□□ -1.74
CTNNA1-222	ENST00000520400	C19orf48	Q6RUI8	117 aa		4.18	□□□□□ -1.74
CTNNA1-222	ENST00000520400	C18orf65	Q6ZTR6	163 aa		4.18	□□□□□ -1.74
CTNNA1-222	ENST00000520400	CCDC186	Q7Z3E2	898 aa		4.18	□□□□□ -1.74
CTNNA1-222	ENST00000520400	KRT77	Q7Z794	578 aa		4.18	□□□□□ -1.74
CTNNA1-222	ENST00000520400	NR2C2AP	Q86WQ0	139 aa		4.18	□□□□□ -1.74
CTNNA1-222	ENST00000520400	CCAR2	Q8N163	923 aa	Known RBP	4.18	□□□□□ -1.74
CTNNA1-222	ENST00000520400	THAP8	Q8NA92	274 aa		4.18	□□□□□ -1.74
CTNNA1-222	ENST00000520400	OR1J1	Q8NGS3	322 aa		4.18	□□□□□ -1.74
CTNNA1-222	ENST00000520400	ROBO4	Q8WZ75	1007 aa		4.18	□□□□□ -1.74
CTNNA1-222	ENST00000520400	DHX58	Q96C10	678 aa		4.18	□□□□□ -1.74
CTNNA1-222	ENST00000520400	SIPA1	Q96FS4	1042 aa		4.18	□□□□□ -1.74
CTNNA1-222	ENST00000520400	SCRN2	Q96FV2	425 aa		4.18	□□□□□ -1.74
CTNNA1-222	ENST00000520400	ZNF354B	Q96LW1	612 aa		4.18	□□□□□ -1.74

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