RNA–Protein interactions for RNA: ENST00000519321.5

SKP1-206, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-206ENST00000519321 PLAGL1Q9UM63 463 aa21.9■■□□□ 1.1
SKP1-206ENST00000519321 MTO1Q9Y2Z2 717 aaKnown RBP21.9■■□□□ 1.1
SKP1-206ENST00000519321 IKBKGQ9Y6K9 419 aa21.9■■□□□ 1.1
SKP1-206ENST00000519321 SPEGQ15772 3267 aa21.89■■□□□ 1.09
SKP1-206ENST00000519321 ZNF839A8K0R7 811 aa21.89■■□□□ 1.09
SKP1-206ENST00000519321 ARHGEF33A8MVX0 844 aa21.89■■□□□ 1.09
SKP1-206ENST00000519321 DXOO77932 396 aaKnown RBP21.89■■□□□ 1.09
SKP1-206ENST00000519321 MPOP05164 745 aa21.89■■□□□ 1.09
SKP1-206ENST00000519321 CHRM5P08912 532 aaPredicted RBP21.89■■□□□ 1.09
SKP1-206ENST00000519321 TPBGLP0DKB5 382 aa21.89■■□□□ 1.09
SKP1-206ENST00000519321 STMN1P16949 149 aa21.89■■□□□ 1.09
SKP1-206ENST00000519321 ZNF37AP17032 561 aaPredicted RBP21.89■■□□□ 1.09
SKP1-206ENST00000519321 CYP2A7P20853 494 aa21.89■■□□□ 1.09
SKP1-206ENST00000519321 KIR2DS3Q14952 304 aa21.89■■□□□ 1.09
SKP1-206ENST00000519321 ANKS6Q68DC2 871 aa21.89■■□□□ 1.09
SKP1-206ENST00000519321 UNQ6494/PRO21346Q6UXR6 183 aa21.89■■□□□ 1.09
SKP1-206ENST00000519321 UBE2R2Q712K3 238 aaPredicted RBP21.89■■□□□ 1.09
SKP1-206ENST00000519321 OR9A1PQ8NGU1 263 aa21.89■■□□□ 1.09
SKP1-206ENST00000519321 HMGCLL1Q8TB92 370 aa21.89■■□□□ 1.09
SKP1-206ENST00000519321 ANKRD7Q92527 254 aa21.89■■□□□ 1.09
SKP1-206ENST00000519321 MENTQ9BUN1 341 aa21.89■■□□□ 1.09
SKP1-206ENST00000519321 GPAMQ9HCL2 828 aa21.89■■□□□ 1.09
SKP1-206ENST00000519321 C1GALT1Q9NS00 363 aa21.89■■□□□ 1.09
SKP1-206ENST00000519321 ACTR10Q9NZ32 417 aa21.89■■□□□ 1.09
SKP1-206ENST00000519321 DKK4Q9UBT3 224 aa21.89■■□□□ 1.09
SKP1-206ENST00000519321 MYO1CO00159 1063 aa21.88■■□□□ 1.09
SKP1-206ENST00000519321 INHBAP08476 426 aa21.88■■□□□ 1.09
SKP1-206ENST00000519321 ITGA2BP08514 1039 aa21.88■■□□□ 1.09
SKP1-206ENST00000519321 FAM153BP0C7A2 387 aa21.88■■□□□ 1.09
SKP1-206ENST00000519321 PRDX3P30048 256 aaKnown RBP21.88■■□□□ 1.09
SKP1-206ENST00000519321 ARHGAP19Q14CB8 494 aa21.88■■□□□ 1.09
SKP1-206ENST00000519321 EFTUD2Q15029 972 aaKnown RBP eCLIP21.88■■□□□ 1.097e-8■■■□□ 18.5
SKP1-206ENST00000519321 FAM153CQ494X1 144 aa21.88■■□□□ 1.09
SKP1-206ENST00000519321 CYB5D1Q6P9G0 228 aa21.88■■□□□ 1.09
SKP1-206ENST00000519321 FOXR1Q6PIV2 292 aa21.88■■□□□ 1.09
SKP1-206ENST00000519321 RASGRP3Q8IV61 690 aa21.88■■□□□ 1.09
SKP1-206ENST00000519321 MCOLN3Q8TDD5 553 aa21.88■■□□□ 1.09
SKP1-206ENST00000519321 KLHL6Q8WZ60 621 aa21.88■■□□□ 1.09
SKP1-206ENST00000519321 MAP3K3Q99759 626 aa21.88■■□□□ 1.09
SKP1-206ENST00000519321 SLC12A9Q9BXP2 914 aa21.88■■□□□ 1.09
SKP1-206ENST00000519321 TMEM121BQ9BXQ6 578 aaPredicted RBP21.88■■□□□ 1.09
SKP1-206ENST00000519321 CCDC86Q9H6F5 360 aaKnown RBP21.88■■□□□ 1.09
SKP1-206ENST00000519321 TMEM8BA6NDV4 472 aa21.87■■□□□ 1.09
SKP1-206ENST00000519321 PABPN1LA6NDY0 278 aaKnown RBP21.87■■□□□ 1.09
SKP1-206ENST00000519321 B4E171 279 aa21.87■■□□□ 1.09
SKP1-206ENST00000519321 MAP3K7O43318 606 aa21.87■■□□□ 1.09
SKP1-206ENST00000519321 RIPK2O43353 540 aa21.87■■□□□ 1.09
SKP1-206ENST00000519321 TSPAN12O95859 305 aa21.87■■□□□ 1.09
SKP1-206ENST00000519321 CDH3P22223 829 aa21.87■■□□□ 1.09
SKP1-206ENST00000519321 TSPAN7P41732 249 aa21.87■■□□□ 1.09
SKP1-206ENST00000519321 ARL4DP49703 201 aa21.87■■□□□ 1.09
SKP1-206ENST00000519321 KPNA2P52292 529 aaKnown RBP21.87■■□□□ 1.09
SKP1-206ENST00000519321 PPP1CAP62136 330 aa21.87■■□□□ 1.09
SKP1-206ENST00000519321 UAP1Q16222 522 aaPredicted RBP21.87■■□□□ 1.09
SKP1-206ENST00000519321 EEF1AKMT2Q5JPI9 291 aaKnown RBP21.87■■□□□ 1.09
SKP1-206ENST00000519321 TMEM164Q5U3C3 297 aa21.87■■□□□ 1.09
SKP1-206ENST00000519321 TAOK1Q7L7X3 1001 aa21.87■■□□□ 1.09
SKP1-206ENST00000519321 CEP97Q8IW35 865 aa21.87■■□□□ 1.09
SKP1-206ENST00000519321 CNPY4Q8N129 248 aa21.87■■□□□ 1.09
SKP1-206ENST00000519321 ZNF578Q96N58 590 aaPredicted RBP21.87■■□□□ 1.09
SKP1-206ENST00000519321 SLC46A1Q96NT5 459 aa21.87■■□□□ 1.09
SKP1-206ENST00000519321 TRIM54Q9BYV2 358 aa21.87■■□□□ 1.09
SKP1-206ENST00000519321 TXLNGYQ9BZA5 131 aa21.87■■□□□ 1.09
SKP1-206ENST00000519321 B3GNT4Q9C0J1 378 aa21.87■■□□□ 1.09
SKP1-206ENST00000519321 TWSG1Q9GZX9 223 aa21.87■■□□□ 1.09
SKP1-206ENST00000519321 PARVBQ9HBI1 364 aa21.87■■□□□ 1.09
SKP1-206ENST00000519321 PISDQ9UG56 409 aa21.87■■□□□ 1.09
SKP1-206ENST00000519321 A0A1W2PNU3 283 aaPredicted RBP21.86■■□□□ 1.09
SKP1-206ENST00000519321 ISM1B1AKI9 464 aa21.86■■□□□ 1.09
SKP1-206ENST00000519321 KIF1CO43896 1103 aaKnown RBP21.86■■□□□ 1.09
SKP1-206ENST00000519321 FAM155BO75949 473 aa21.86■■□□□ 1.09
SKP1-206ENST00000519321 TNFSF15O95150 251 aa21.86■■□□□ 1.09
SKP1-206ENST00000519321 FKBP9O95302 570 aa21.86■■□□□ 1.09
SKP1-206ENST00000519321 ZBTB11O95625 1053 aaPredicted RBP21.86■■□□□ 1.09
SKP1-206ENST00000519321 HIST1H2AGP0C0S8 130 aaPredicted RBP21.86■■□□□ 1.09
SKP1-206ENST00000519321 MYBL2P10244 700 aa21.86■■□□□ 1.09
SKP1-206ENST00000519321 NELFEP18615 380 aaKnown RBP21.86■■□□□ 1.09
SKP1-206ENST00000519321 HIST1H2ADP20671 130 aa21.86■■□□□ 1.09
SKP1-206ENST00000519321 MSH2P43246 934 aa21.86■■□□□ 1.09
SKP1-206ENST00000519321 SEPHS1P49903 392 aa21.86■■□□□ 1.09
SKP1-206ENST00000519321 SERPINB9P50453 376 aa21.86■■□□□ 1.09
SKP1-206ENST00000519321 RAB15P59190 212 aa21.86■■□□□ 1.09
SKP1-206ENST00000519321 ERVPABLB-1P60509 514 aa21.86■■□□□ 1.09
SKP1-206ENST00000519321 RAB10P61026 200 aa21.86■■□□□ 1.09
SKP1-206ENST00000519321 ZKSCAN8Q15776 578 aaPredicted RBP21.86■■□□□ 1.09
SKP1-206ENST00000519321 CYP2A13Q16696 494 aa21.86■■□□□ 1.09
SKP1-206ENST00000519321 SLC5A12Q1EHB4 618 aa21.86■■□□□ 1.09
SKP1-206ENST00000519321 CCSMST1Q4G0I0 132 aa21.86■■□□□ 1.09
SKP1-206ENST00000519321 SPESP1Q6UW49 350 aa21.86■■□□□ 1.09
SKP1-206ENST00000519321 CCDC91Q7Z6B0 441 aa21.86■■□□□ 1.09
SKP1-206ENST00000519321 FAM129CQ86XR2 697 aa21.86■■□□□ 1.09
SKP1-206ENST00000519321 GSPT2Q8IYD1 628 aaKnown RBP21.86■■□□□ 1.09
SKP1-206ENST00000519321 LINC01555Q8NAE3 123 aa21.86■■□□□ 1.09
SKP1-206ENST00000519321 SLC44A1Q8WWI5 657 aa21.86■■□□□ 1.09
SKP1-206ENST00000519321 MRRFQ96E11 262 aaKnown RBP21.86■■□□□ 1.09
SKP1-206ENST00000519321 PRR11Q96HE9 360 aaPredicted RBP21.86■■□□□ 1.09
SKP1-206ENST00000519321 HIST1H2AHQ96KK5 128 aa21.86■■□□□ 1.09
SKP1-206ENST00000519321 IL17FQ96PD4 163 aa21.86■■□□□ 1.09
SKP1-206ENST00000519321 HIST1H2AJQ99878 128 aa21.86■■□□□ 1.09
SKP1-206ENST00000519321 H2AFJQ9BTM1 129 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms