RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 GLIPR1P48060 266 aa3.37□□□□□ -1.87
VPS13B-207ENST00000518569 ASCL1P50553 236 aa3.37□□□□□ -1.87
VPS13B-207ENST00000518569 CDH11P55287 796 aa3.37□□□□□ -1.87
VPS13B-207ENST00000518569 HNRNPKP61978 463 aaKnown RBP eCLIP3.37□□□□□ -1.87
VPS13B-207ENST00000518569 MAT1AQ00266 395 aaKnown RBP3.37□□□□□ -1.87
VPS13B-207ENST00000518569 HYAL1Q12794 435 aa3.37□□□□□ -1.87
VPS13B-207ENST00000518569 RALGDSQ12967 914 aa3.37□□□□□ -1.87
VPS13B-207ENST00000518569 TAF13Q15543 124 aa3.37□□□□□ -1.87
VPS13B-207ENST00000518569 KIAA1644Q3SXP7 199 aa3.37□□□□□ -1.87
VPS13B-207ENST00000518569 KLHL26Q53HC5 615 aa3.37□□□□□ -1.87
VPS13B-207ENST00000518569 ZNF628Q5EBL2 1059 aa3.37□□□□□ -1.87
VPS13B-207ENST00000518569 C6orf163Q5TEZ5 329 aa3.37□□□□□ -1.87
VPS13B-207ENST00000518569 KRTAP5-11Q6L8G4 156 aa3.37□□□□□ -1.87
VPS13B-207ENST00000518569 MFSD6Q6ZSS7 791 aa3.37□□□□□ -1.87
VPS13B-207ENST00000518569 CHST3Q7LGC8 479 aa3.37□□□□□ -1.87
VPS13B-207ENST00000518569 KRT77Q7Z794 578 aa3.37□□□□□ -1.87
VPS13B-207ENST00000518569 ANKRD23Q86SG2 305 aa3.37□□□□□ -1.87
VPS13B-207ENST00000518569 CCDC191Q8NCU4 936 aa3.37□□□□□ -1.87
VPS13B-207ENST00000518569 NPEPL1Q8NDH3 523 aa3.37□□□□□ -1.87
VPS13B-207ENST00000518569 HDAC11Q96DB2 347 aa3.37□□□□□ -1.87
VPS13B-207ENST00000518569 FBXO17Q96EF6 278 aa3.37□□□□□ -1.87
VPS13B-207ENST00000518569 F2RL3Q96RI0 385 aa3.37□□□□□ -1.87
VPS13B-207ENST00000518569 TRAF4Q9BUZ4 470 aaPredicted RBP3.37□□□□□ -1.87
VPS13B-207ENST00000518569 VPS33BQ9H267 617 aa3.37□□□□□ -1.87
VPS13B-207ENST00000518569 CNOT10Q9H9A5 744 aaKnown RBP3.37□□□□□ -1.87
VPS13B-207ENST00000518569 TXLNGQ9NUQ3 528 aa3.37□□□□□ -1.87
VPS13B-207ENST00000518569 WDR35Q9P2L0 1181 aa3.37□□□□□ -1.87
VPS13B-207ENST00000518569 ISY1Q9ULR0 285 aaKnown RBP3.37□□□□□ -1.87
VPS13B-207ENST00000518569 PADI2Q9Y2J8 665 aa3.37□□□□□ -1.87
VPS13B-207ENST00000518569 C2CD2Q9Y426 696 aa3.37□□□□□ -1.87
VPS13B-207ENST00000518569 TRIM17Q9Y577 477 aa3.37□□□□□ -1.87
VPS13B-207ENST00000518569 CUX2O14529 1486 aa3.36□□□□□ -1.87
VPS13B-207ENST00000518569 IGLV9-49A0A0B4J1Y8 123 aa3.36□□□□□ -1.87
VPS13B-207ENST00000518569 A0A1W2PPM1 405 aa3.36□□□□□ -1.87
VPS13B-207ENST00000518569 PRR23AA6NEV1 266 aa3.36□□□□□ -1.87
VPS13B-207ENST00000518569 ATP6V0E1O15342 81 aa3.36□□□□□ -1.87
VPS13B-207ENST00000518569 SPRY1O43609 319 aaPredicted RBP3.36□□□□□ -1.87
VPS13B-207ENST00000518569 DKC1O60832 514 aaKnown RBP eCLIP3.36□□□□□ -1.87
VPS13B-207ENST00000518569 FRMD6-AS1P0C7T7 363 aa3.36□□□□□ -1.87
VPS13B-207ENST00000518569 CA6P23280 308 aa3.36□□□□□ -1.87
VPS13B-207ENST00000518569 CPT2P23786 658 aa3.36□□□□□ -1.87
VPS13B-207ENST00000518569 EEF1B2P24534 225 aaKnown RBP3.36□□□□□ -1.87
VPS13B-207ENST00000518569 PEX19P40855 299 aa3.36□□□□□ -1.87
VPS13B-207ENST00000518569 VWC2Q2TAL6 325 aa3.36□□□□□ -1.87
VPS13B-207ENST00000518569 SYT14P1Q58G82 188 aa3.36□□□□□ -1.87
VPS13B-207ENST00000518569 DCAF10Q5QP82 559 aa3.36□□□□□ -1.87
VPS13B-207ENST00000518569 ELFN2Q5R3F8 820 aa3.36□□□□□ -1.87
VPS13B-207ENST00000518569 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.36□□□□□ -1.87
VPS13B-207ENST00000518569 C11orf63Q6NUN7 778 aa3.36□□□□□ -1.87
VPS13B-207ENST00000518569 CENPVQ7Z7K6 275 aaPredicted RBP3.36□□□□□ -1.87
VPS13B-207ENST00000518569 ISCA2Q86U28 154 aa3.36□□□□□ -1.87
VPS13B-207ENST00000518569 RPAINQ86UA6 219 aa3.36□□□□□ -1.87
VPS13B-207ENST00000518569 LCA5Q86VQ0 697 aa3.36□□□□□ -1.87
VPS13B-207ENST00000518569 CHCHD4Q8N4Q1 142 aa3.36□□□□□ -1.87
VPS13B-207ENST00000518569 OTUD6BQ8N6M0 293 aa3.36□□□□□ -1.87
VPS13B-207ENST00000518569 FAM76AQ8TAV0 307 aa3.36□□□□□ -1.87
VPS13B-207ENST00000518569 SSMEM1Q8WWF3 244 aa3.36□□□□□ -1.87
VPS13B-207ENST00000518569 TMEM190Q8WZ59 177 aa3.36□□□□□ -1.87
VPS13B-207ENST00000518569 ZNF653Q96CK0 615 aa3.36□□□□□ -1.87
VPS13B-207ENST00000518569 ZNF501Q96CX3 271 aaPredicted RBP3.36□□□□□ -1.87
VPS13B-207ENST00000518569 RMDN1Q96DB5 314 aa3.36□□□□□ -1.87
VPS13B-207ENST00000518569 LGALS12Q96DT0 336 aa3.36□□□□□ -1.87
VPS13B-207ENST00000518569 NSL1Q96IY1 281 aa3.36□□□□□ -1.87
VPS13B-207ENST00000518569 LINC00615Q96LM1 132 aaPredicted RBP3.36□□□□□ -1.87
VPS13B-207ENST00000518569 FNBP1Q96RU3 617 aa3.36□□□□□ -1.87
VPS13B-207ENST00000518569 MYCBPQ99417 103 aaPredicted RBP3.36□□□□□ -1.87
VPS13B-207ENST00000518569 PITPNM3Q9BZ71 974 aa3.36□□□□□ -1.87
VPS13B-207ENST00000518569 LAT2Q9GZY6 243 aa3.36□□□□□ -1.87
VPS13B-207ENST00000518569 MIS12Q9H081 205 aa3.36□□□□□ -1.87
VPS13B-207ENST00000518569 OR10A4Q9H209 315 aa3.36□□□□□ -1.87
VPS13B-207ENST00000518569 ERVMER34-1Q9H9K5 563 aa3.36□□□□□ -1.87
VPS13B-207ENST00000518569 Q9N2K0 584 aa3.36□□□□□ -1.87
VPS13B-207ENST00000518569 SDR39U1Q9NRG7 319 aaPredicted RBP3.36□□□□□ -1.87
VPS13B-207ENST00000518569 NFKBIL1Q9UBC1 381 aaPredicted RBP3.36□□□□□ -1.87
VPS13B-207ENST00000518569 CFDP1Q9UEE9 299 aaPredicted RBP3.36□□□□□ -1.87
VPS13B-207ENST00000518569 PCDH11YQ9BZA8 1340 aa3.36□□□□□ -1.87
VPS13B-207ENST00000518569 ERCC6Q03468 1493 aa3.35□□□□□ -1.87
VPS13B-207ENST00000518569 GREB1LQ9C091 1923 aaPredicted RBP3.35□□□□□ -1.87
VPS13B-207ENST00000518569 IGHV4-61A0A0C4DH41 118 aa3.35□□□□□ -1.87
VPS13B-207ENST00000518569 LOC101059948A0A1B0GTJ6 334 aa3.35□□□□□ -1.87
VPS13B-207ENST00000518569 TRIM77I1YAP6 450 aa3.35□□□□□ -1.87
VPS13B-207ENST00000518569 TADA2AO75478 443 aa3.35□□□□□ -1.87
VPS13B-207ENST00000518569 GGPS1O95749 300 aa3.35□□□□□ -1.87
VPS13B-207ENST00000518569 IGHV4-59P01825 116 aa3.35□□□□□ -1.87
VPS13B-207ENST00000518569 AMBPP02760 352 aa3.35□□□□□ -1.87
VPS13B-207ENST00000518569 RPN1P04843 607 aaKnown RBP3.35□□□□□ -1.87
VPS13B-207ENST00000518569 EDN1P05305 212 aa3.35□□□□□ -1.87
VPS13B-207ENST00000518569 PRSS56P0CW18 603 aa3.35□□□□□ -1.87
VPS13B-207ENST00000518569 HSPA8P11142 646 aaKnown RBP3.35□□□□□ -1.87
VPS13B-207ENST00000518569 CA4P22748 312 aa3.35□□□□□ -1.87
VPS13B-207ENST00000518569 MC5RP33032 325 aa3.35□□□□□ -1.87
VPS13B-207ENST00000518569 ALDH3A2P51648 485 aa3.35□□□□□ -1.87
VPS13B-207ENST00000518569 PPP5CP53041 499 aa3.35□□□□□ -1.87
VPS13B-207ENST00000518569 RAD23AP54725 363 aa3.35□□□□□ -1.87
VPS13B-207ENST00000518569 HERV-K104P61576 105 aa3.35□□□□□ -1.87
VPS13B-207ENST00000518569 RBM39Q14498 530 aaKnown RBP3.35□□□□□ -1.87
VPS13B-207ENST00000518569 ITPRIPL2Q3MIP1 535 aa3.35□□□□□ -1.87
VPS13B-207ENST00000518569 ARHGAP17Q68EM7 881 aa3.35□□□□□ -1.87
VPS13B-207ENST00000518569 MFSD12Q6NUT3 480 aa3.35□□□□□ -1.87
VPS13B-207ENST00000518569 DET1Q7L5Y6 550 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms