RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 NELFEP18615 380 aaKnown RBP21.3■■□□□ 1
VEGFA-217ENST00000518538 PRDX3P30048 256 aaKnown RBP21.3■■□□□ 1
VEGFA-217ENST00000518538 LRRC8EQ6NSJ5 796 aa21.3■■□□□ 1
VEGFA-217ENST00000518538 FMO2Q99518 471 aa21.3■■□□□ 1
VEGFA-217ENST00000518538 FBXO8Q9NRD0 319 aa21.3■■□□□ 1
VEGFA-217ENST00000518538 C1GALT1Q9NS00 363 aa21.3■■□□□ 1
VEGFA-217ENST00000518538 ACSL6Q9UKU0 697 aa21.3■■□□□ 1
VEGFA-217ENST00000518538 SLC39A10Q9ULF5 831 aa21.3■■□□□ 1
VEGFA-217ENST00000518538 VWA7Q9Y334 891 aa21.3■■□□□ 1
VEGFA-217ENST00000518538 ASPMQ8IZT6 3477 aa21.29■■□□□ 1
VEGFA-217ENST00000518538 CXorf49A8MYA2 514 aaPredicted RBP21.29■■□□□ 1
VEGFA-217ENST00000518538 RASGRF2O14827 1237 aa21.29■■□□□ 1
VEGFA-217ENST00000518538 PIAS1O75925 651 aa21.29■■□□□ 1
VEGFA-217ENST00000518538 C1QAP02745 245 aa21.29■■□□□ 1
VEGFA-217ENST00000518538 CDH3P22223 829 aa21.29■■□□□ 1
VEGFA-217ENST00000518538 FDXRP22570 491 aa21.29■■□□□ 1
VEGFA-217ENST00000518538 MCM3P25205 808 aa21.29■■□□□ 1
VEGFA-217ENST00000518538 ECHS1P30084 290 aa21.29■■□□□ 1
VEGFA-217ENST00000518538 STX2P32856 288 aa21.29■■□□□ 1
VEGFA-217ENST00000518538 RGS4P49798 205 aa21.29■■□□□ 1
VEGFA-217ENST00000518538 RELL1Q8IUW5 271 aa21.29■■□□□ 1
VEGFA-217ENST00000518538 SPNS2Q8IVW8 549 aa21.29■■□□□ 1
VEGFA-217ENST00000518538 PPM1MQ96MI6 270 aa21.29■■□□□ 1
VEGFA-217ENST00000518538 MCMBPQ9BTE3 642 aa21.29■■□□□ 1
VEGFA-217ENST00000518538 PITPNM3Q9BZ71 974 aa21.29■■□□□ 1
VEGFA-217ENST00000518538 RHOJQ9H4E5 214 aa21.29■■□□□ 1
VEGFA-217ENST00000518538 FOXJ2Q9P0K8 574 aa21.29■■□□□ 1
VEGFA-217ENST00000518538 CIDEBQ9UHD4 219 aa21.29■■□□□ 1
VEGFA-217ENST00000518538 TPRP12270 2363 aaKnown RBP21.29■■□□□ 1
VEGFA-217ENST00000518538 FREM2Q5SZK8 3169 aa21.28■■□□□ 1
VEGFA-217ENST00000518538 ARHGEF33A8MVX0 844 aa21.28■■□□□ 1
VEGFA-217ENST00000518538 ZBTB11O95625 1053 aaPredicted RBP21.28■■□□□ 1
VEGFA-217ENST00000518538 CATP04040 527 aaKnown RBP21.28■■□□□ 1
VEGFA-217ENST00000518538 CD82P27701 267 aa21.28■■□□□ 1
VEGFA-217ENST00000518538 EIF2S3P41091 472 aaKnown RBP21.28■■□□□ 1
VEGFA-217ENST00000518538 PDAP1Q13442 181 aaKnown RBP21.28■■□□□ 1
VEGFA-217ENST00000518538 KIR2DS3Q14952 304 aa21.28■■□□□ 1
VEGFA-217ENST00000518538 CCSMST1Q4G0I0 132 aa21.28■■□□□ 1
VEGFA-217ENST00000518538 EEF1AKMT2Q5JPI9 291 aaKnown RBP21.28■■□□□ 1
VEGFA-217ENST00000518538 DCAF12Q5T6F0 453 aa21.28■■□□□ 1
VEGFA-217ENST00000518538 PAQR3Q6TCH7 311 aa21.28■■□□□ 1
VEGFA-217ENST00000518538 SPESP1Q6UW49 350 aa21.28■■□□□ 1
VEGFA-217ENST00000518538 CYHR1Q6ZMK1 362 aa21.28■■□□□ 1
VEGFA-217ENST00000518538 PIWIL4Q7Z3Z4 852 aaKnown RBP21.28■■□□□ 1
VEGFA-217ENST00000518538 RAB42Q8N4Z0 105 aa21.28■■□□□ 1
VEGFA-217ENST00000518538 LINC01555Q8NAE3 123 aa21.28■■□□□ 1
VEGFA-217ENST00000518538 LRRN4CLQ8ND94 238 aa21.28■■□□□ 1
VEGFA-217ENST00000518538 ZNF248Q8NDW4 579 aa21.28■■□□□ 1
VEGFA-217ENST00000518538 OR2L8Q8NGY9 312 aa21.28■■□□□ 1
VEGFA-217ENST00000518538 ASB11Q8WXH4 323 aa21.28■■□□□ 1
VEGFA-217ENST00000518538 ELMO2Q96JJ3 720 aa21.28■■□□□ 1
VEGFA-217ENST00000518538 IL17FQ96PD4 163 aa21.28■■□□□ 1
VEGFA-217ENST00000518538 TEFMQ96QE5 360 aaKnown RBP21.28■■□□□ 1
VEGFA-217ENST00000518538 OR2A14Q96R47 310 aa21.28■■□□□ 1
VEGFA-217ENST00000518538 OLFM1Q99784 485 aa21.28■■□□□ 1
VEGFA-217ENST00000518538 CPNE1Q99829 537 aa21.28■■□□□ 1
VEGFA-217ENST00000518538 ASPSCR1Q9BZE9 553 aa21.28■■□□□ 1
VEGFA-217ENST00000518538 SPHK1Q9NYA1 384 aa21.28■■□□□ 1
VEGFA-217ENST00000518538 SPATA7Q9P0W8 599 aa21.28■■□□□ 1
VEGFA-217ENST00000518538 TXNDC16Q9P2K2 825 aa21.28■■□□□ 1
VEGFA-217ENST00000518538 B3GALT1Q9Y5Z6 326 aa21.28■■□□□ 1
VEGFA-217ENST00000518538 IGF2RP11717 2491 aa21.27■■□□□ 1
VEGFA-217ENST00000518538 FAM95CA0A1B0GW59 222 aa21.27■■□□□ 1
VEGFA-217ENST00000518538 SRRM3A6NNA2 597 aaPredicted RBP21.27■■□□□ 1
VEGFA-217ENST00000518538 GFYI3L273 518 aa21.27■■□□□ 1
VEGFA-217ENST00000518538 MYO1CO00159 1063 aa21.27■■□□□ 1
VEGFA-217ENST00000518538 UGT2B7P16662 529 aa21.27■■□□□ 1
VEGFA-217ENST00000518538 ARL4DP49703 201 aa21.27■■□□□ 1
VEGFA-217ENST00000518538 SH3BP2P78314 561 aa21.27■■□□□ 1
VEGFA-217ENST00000518538 HSD11B2P80365 405 aa21.27■■□□□ 1
VEGFA-217ENST00000518538 FOXM1Q08050 763 aa21.27■■□□□ 1
VEGFA-217ENST00000518538 ANKS6Q68DC2 871 aa21.27■■□□□ 1
VEGFA-217ENST00000518538 FBXO38Q6PIJ6 1188 aa21.27■■□□□ 1
VEGFA-217ENST00000518538 CEACAM20Q6UY09 585 aa21.27■■□□□ 1
VEGFA-217ENST00000518538 RASGRP3Q8IV61 690 aa21.27■■□□□ 1
VEGFA-217ENST00000518538 IFT20Q8IY31 132 aa21.27■■□□□ 1
VEGFA-217ENST00000518538 D2HGDHQ8N465 521 aa21.27■■□□□ 1
VEGFA-217ENST00000518538 FBXO15Q8NCQ5 510 aaPredicted RBP21.27■■□□□ 1
VEGFA-217ENST00000518538 FLVCR1-AS1Q8TAF5 88 aa21.27■■□□□ 1
VEGFA-217ENST00000518538 FBF1Q8TES7 1133 aa21.27■■□□□ 1
VEGFA-217ENST00000518538 EEF1AKMT1Q8WVE0 214 aa21.27■■□□□ 1
VEGFA-217ENST00000518538 PMEPA1Q969W9 287 aa21.27■■□□□ 1
VEGFA-217ENST00000518538 VPS39Q96JC1 886 aa21.27■■□□□ 1
VEGFA-217ENST00000518538 ZPBPQ9BS86 351 aa21.27■■□□□ 1
VEGFA-217ENST00000518538 BTRCQ9Y297 605 aa21.27■■□□□ 1
VEGFA-217ENST00000518538 PCDHB11Q9Y5F2 797 aa21.27■■□□□ 1
VEGFA-217ENST00000518538 POLR1CO15160 346 aaPredicted RBP21.26■□□□□ 0.99
VEGFA-217ENST00000518538 RRP8O43159 456 aaKnown RBP21.26■□□□□ 0.99
VEGFA-217ENST00000518538 RHOXF2BP0C7M4 288 aa21.26■□□□□ 0.99
VEGFA-217ENST00000518538 PEBP1P30086 187 aaKnown RBP21.26■□□□□ 0.99
VEGFA-217ENST00000518538 GP5P40197 560 aa21.26■□□□□ 0.99
VEGFA-217ENST00000518538 NAB1Q13506 487 aa21.26■□□□□ 0.99
VEGFA-217ENST00000518538 KBTBD12Q3ZCT8 623 aa21.26■□□□□ 0.99
VEGFA-217ENST00000518538 CYB5D1Q6P9G0 228 aa21.26■□□□□ 0.99
VEGFA-217ENST00000518538 CTAGE3PQ8IX95 158 aa21.26■□□□□ 0.99
VEGFA-217ENST00000518538 OR9A1PQ8NGU1 263 aa21.26■□□□□ 0.99
VEGFA-217ENST00000518538 HMGCLL1Q8TB92 370 aa21.26■□□□□ 0.99
VEGFA-217ENST00000518538 DENND1AQ8TEH3 1009 aa21.26■□□□□ 0.99
VEGFA-217ENST00000518538 SLC22A18Q96BI1 424 aa21.26■□□□□ 0.99
VEGFA-217ENST00000518538 DCBLD2Q96PD2 775 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms