RNA–Protein interactions for RNA: ENST00000517904.1

CTNNA1-205, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-205ENST00000517904 C2orf81A6NN90 581 aa10.9□□□□□ -0.66
CTNNA1-205ENST00000517904 CCL22O00626 93 aa10.9□□□□□ -0.66
CTNNA1-205ENST00000517904 RALBP11234 206 aa10.9□□□□□ -0.66
CTNNA1-205ENST00000517904 ALAS2P22557 587 aa10.9□□□□□ -0.66
CTNNA1-205ENST00000517904 HTR1EP28566 365 aa10.9□□□□□ -0.66
CTNNA1-205ENST00000517904 PEBP1P30086 187 aaKnown RBP10.9□□□□□ -0.66
CTNNA1-205ENST00000517904 CDKN2BP42772 138 aa10.9□□□□□ -0.66
CTNNA1-205ENST00000517904 NR2C2P49116 596 aa10.9□□□□□ -0.66
CTNNA1-205ENST00000517904 CDKN1CP49918 316 aaPredicted RBP10.9□□□□□ -0.66
CTNNA1-205ENST00000517904 ZBED6P86452 979 aa10.9□□□□□ -0.66
CTNNA1-205ENST00000517904 MFAP5Q13361 173 aa10.9□□□□□ -0.66
CTNNA1-205ENST00000517904 MSLNQ13421 630 aaPredicted RBP10.9□□□□□ -0.66
CTNNA1-205ENST00000517904 TESK1Q15569 626 aa10.9□□□□□ -0.66
CTNNA1-205ENST00000517904 ZNF630Q2M218 657 aaPredicted RBP10.9□□□□□ -0.66
CTNNA1-205ENST00000517904 TUBB8Q3ZCM7 444 aa10.9□□□□□ -0.66
CTNNA1-205ENST00000517904 IRAK1BP1Q5VVH5 260 aa10.9□□□□□ -0.66
CTNNA1-205ENST00000517904 ISLR2Q6UXK2 745 aa10.9□□□□□ -0.66
CTNNA1-205ENST00000517904 OVCH1Q7RTY7 1134 aa10.9□□□□□ -0.66
CTNNA1-205ENST00000517904 MRGPRGQ86SM5 289 aa10.9□□□□□ -0.66
CTNNA1-205ENST00000517904 FAM20CQ8IXL6 584 aa10.9□□□□□ -0.66
CTNNA1-205ENST00000517904 ZNF295-AS1Q8N0V1 137 aa10.9□□□□□ -0.66
CTNNA1-205ENST00000517904 OR11G2Q8NGC1 345 aa10.9□□□□□ -0.66
CTNNA1-205ENST00000517904 OR1N1Q8NGS0 311 aa10.9□□□□□ -0.66
CTNNA1-205ENST00000517904 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.9□□□□□ -0.66
CTNNA1-205ENST00000517904 ULK4Q96C45 1275 aa10.9□□□□□ -0.66
CTNNA1-205ENST00000517904 APOL2Q9BQE5 337 aa10.9□□□□□ -0.66
CTNNA1-205ENST00000517904 FICDQ9BVA6 458 aa10.9□□□□□ -0.66
CTNNA1-205ENST00000517904 NAT10Q9H0A0 1025 aaKnown RBP10.9□□□□□ -0.66
CTNNA1-205ENST00000517904 SLC26A1Q9H2B4 701 aa10.9□□□□□ -0.66
CTNNA1-205ENST00000517904 SOX17Q9H6I2 414 aaPredicted RBP10.9□□□□□ -0.66
CTNNA1-205ENST00000517904 IRAK4Q9NWZ3 460 aa10.9□□□□□ -0.66
CTNNA1-205ENST00000517904 EURLQ9NYK6 297 aa10.9□□□□□ -0.66
CTNNA1-205ENST00000517904 CTSFQ9UBX1 484 aa10.9□□□□□ -0.66
CTNNA1-205ENST00000517904 CAPN11Q9UMQ6 739 aa10.9□□□□□ -0.66
CTNNA1-205ENST00000517904 PLCL2Q9UPR0 1127 aa10.9□□□□□ -0.66
CTNNA1-205ENST00000517904 KLHL20Q9Y2M5 609 aa10.9□□□□□ -0.66
CTNNA1-205ENST00000517904 TRGV8A0A0C4DH27 118 aa10.89□□□□□ -0.67
CTNNA1-205ENST00000517904 A0A1B0GX78 115 aa10.89□□□□□ -0.67
CTNNA1-205ENST00000517904 C5orf60A6NFR6 353 aa10.89□□□□□ -0.67
CTNNA1-205ENST00000517904 SMTNL1A8MU46 457 aa10.89□□□□□ -0.67
CTNNA1-205ENST00000517904 CFAP99D6REC4 459 aa10.89□□□□□ -0.67
CTNNA1-205ENST00000517904 CST8O60676 142 aa10.89□□□□□ -0.67
CTNNA1-205ENST00000517904 ONECUT2O95948 504 aa10.89□□□□□ -0.67
CTNNA1-205ENST00000517904 SERPINC1P01008 464 aa10.89□□□□□ -0.67
CTNNA1-205ENST00000517904 ALBP02768 609 aa10.89□□□□□ -0.67
CTNNA1-205ENST00000517904 PRSS56P0CW18 603 aa10.89□□□□□ -0.67
CTNNA1-205ENST00000517904 COX6B1P14854 86 aa10.89□□□□□ -0.67
CTNNA1-205ENST00000517904 MAGP20916 626 aa10.89□□□□□ -0.67
CTNNA1-205ENST00000517904 SHMT2P34897 504 aa10.89□□□□□ -0.67
CTNNA1-205ENST00000517904 ADRA1AP35348 466 aa10.89□□□□□ -0.67
CTNNA1-205ENST00000517904 ZNF140P52738 457 aaPredicted RBP10.89□□□□□ -0.67
CTNNA1-205ENST00000517904 SRSF11Q05519 484 aaKnown RBP10.89□□□□□ -0.67
CTNNA1-205ENST00000517904 RPA4Q13156 261 aa10.89□□□□□ -0.67
CTNNA1-205ENST00000517904 TAZQ16635 292 aa10.89□□□□□ -0.67
CTNNA1-205ENST00000517904 SLC5A12Q1EHB4 618 aa10.89□□□□□ -0.67
CTNNA1-205ENST00000517904 LRRC38Q5VT99 294 aa10.89□□□□□ -0.67
CTNNA1-205ENST00000517904 RANBP10Q6VN20 620 aa10.89□□□□□ -0.67
CTNNA1-205ENST00000517904 BZW1Q7L1Q6 419 aaKnown RBP10.89□□□□□ -0.67
CTNNA1-205ENST00000517904 SNX20Q7Z614 316 aa10.89□□□□□ -0.67
CTNNA1-205ENST00000517904 ZNF808Q8N4W9 903 aaPredicted RBP10.89□□□□□ -0.67
CTNNA1-205ENST00000517904 DTWD1Q8N5C7 304 aa10.89□□□□□ -0.67
CTNNA1-205ENST00000517904 CLDN19Q8N6F1 224 aa10.89□□□□□ -0.67
CTNNA1-205ENST00000517904 SLC35G2Q8TBE7 412 aa10.89□□□□□ -0.67
CTNNA1-205ENST00000517904 NR4A3Q92570 626 aa10.89□□□□□ -0.67
CTNNA1-205ENST00000517904 MAGEB10Q96LZ2 347 aaPredicted RBP10.89□□□□□ -0.67
CTNNA1-205ENST00000517904 VAT1Q99536 393 aa10.89□□□□□ -0.67
CTNNA1-205ENST00000517904 MRM3Q9HC36 420 aaKnown RBP10.89□□□□□ -0.67
CTNNA1-205ENST00000517904 CHST11Q9NPF2 352 aa10.89□□□□□ -0.67
CTNNA1-205ENST00000517904 RSPH14Q9UHP6 348 aa10.89□□□□□ -0.67
CTNNA1-205ENST00000517904 PLAGL1Q9UM63 463 aa10.89□□□□□ -0.67
CTNNA1-205ENST00000517904 HYOU1Q9Y4L1 999 aa10.89□□□□□ -0.67
CTNNA1-205ENST00000517904 NCOA6Q14686 2063 aaPredicted RBP10.88□□□□□ -0.67
CTNNA1-205ENST00000517904 CACNA1CQ13936 2221 aa10.88□□□□□ -0.67
CTNNA1-205ENST00000517904 TRBV5-4A0A0C4DH59 114 aa10.88□□□□□ -0.67
CTNNA1-205ENST00000517904 CCL21O00585 134 aa10.88□□□□□ -0.67
CTNNA1-205ENST00000517904 GYPCP04921 128 aa10.88□□□□□ -0.67
CTNNA1-205ENST00000517904 TMEM253P0C7T8 217 aa10.88□□□□□ -0.67
CTNNA1-205ENST00000517904 TNNT1P13805 278 aa10.88□□□□□ -0.67
CTNNA1-205ENST00000517904 ITGALP20701 1170 aa10.88□□□□□ -0.67
CTNNA1-205ENST00000517904 MCM3P25205 808 aa10.88□□□□□ -0.67
CTNNA1-205ENST00000517904 ACRV1P26436 265 aa10.88□□□□□ -0.67
CTNNA1-205ENST00000517904 ACADLP28330 430 aa10.88□□□□□ -0.67
CTNNA1-205ENST00000517904 KRTAP10-9P60411 292 aa10.88□□□□□ -0.67
CTNNA1-205ENST00000517904 SLC18A3Q16572 532 aa10.88□□□□□ -0.67
CTNNA1-205ENST00000517904 RBBP7Q16576 425 aa10.88□□□□□ -0.67
CTNNA1-205ENST00000517904 KRTAP21-3Q3LHN1 58 aa10.88□□□□□ -0.67
CTNNA1-205ENST00000517904 KAZNQ674X7 775 aa10.88□□□□□ -0.67
CTNNA1-205ENST00000517904 GFRALQ6UXV0 394 aa10.88□□□□□ -0.67
CTNNA1-205ENST00000517904 SERPINA9Q86WD7 417 aa10.88□□□□□ -0.67
CTNNA1-205ENST00000517904 HEXDCQ8WVB3 486 aa10.88□□□□□ -0.67
CTNNA1-205ENST00000517904 DLG3Q92796 817 aa10.88□□□□□ -0.67
CTNNA1-205ENST00000517904 HAUS1Q96CS2 278 aa10.88□□□□□ -0.67
CTNNA1-205ENST00000517904 QKIQ96PU8 341 aaKnown RBP eCLIP10.88□□□□□ -0.679e-7■■■■■ 26.9
CTNNA1-205ENST00000517904 LMF1Q96S06 567 aa10.88□□□□□ -0.67
CTNNA1-205ENST00000517904 GBA3Q9H227 469 aa10.88□□□□□ -0.67
CTNNA1-205ENST00000517904 C10orf88Q9H8K7 445 aa10.88□□□□□ -0.67
CTNNA1-205ENST00000517904 VPS37BQ9H9H4 285 aa10.88□□□□□ -0.67
CTNNA1-205ENST00000517904 ZDHHC3Q9NYG2 299 aa10.88□□□□□ -0.67
CTNNA1-205ENST00000517904 PLA2G3Q9NZ20 509 aa10.88□□□□□ -0.67
CTNNA1-205ENST00000517904 OR6C2Q9NZP2 312 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms