RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 PDYNP01213 254 aa25.87■■□□□ 1.73
COL13A1-210ENST00000517713 CATP04040 527 aaKnown RBP25.87■■□□□ 1.73
COL13A1-210ENST00000517713 C8BP07358 591 aa25.87■■□□□ 1.73
COL13A1-210ENST00000517713 JAK1P23458 1154 aa25.87■■□□□ 1.73
COL13A1-210ENST00000517713 RAB7BQ96AH8 199 aa25.87■■□□□ 1.73
COL13A1-210ENST00000517713 ELSPBP1Q96BH3 223 aa25.87■■□□□ 1.73
COL13A1-210ENST00000517713 GMPR2Q9P2T1 348 aaKnown RBP25.87■■□□□ 1.73
COL13A1-210ENST00000517713 PCDHA9Q9Y5H5 950 aa25.87■■□□□ 1.73
COL13A1-210ENST00000517713 DENND4AQ7Z401 1863 aa25.86■■□□□ 1.73
COL13A1-210ENST00000517713 IFRD1O00458 451 aaPredicted RBP25.86■■□□□ 1.73
COL13A1-210ENST00000517713 DNAJA2O60884 412 aa25.86■■□□□ 1.73
COL13A1-210ENST00000517713 STAMBPO95630 424 aa25.86■■□□□ 1.73
COL13A1-210ENST00000517713 HSD17B1P14061 328 aa25.86■■□□□ 1.73
COL13A1-210ENST00000517713 GDI1P31150 447 aa25.86■■□□□ 1.73
COL13A1-210ENST00000517713 CASP2P42575 452 aa25.86■■□□□ 1.73
COL13A1-210ENST00000517713 MAPK9P45984 424 aa25.86■■□□□ 1.73
COL13A1-210ENST00000517713 SELENOMQ8WWX9 145 aa25.86■■□□□ 1.73
COL13A1-210ENST00000517713 ATL1Q8WXF7 558 aa25.86■■□□□ 1.73
COL13A1-210ENST00000517713 CCDC138Q96M89 665 aa25.86■■□□□ 1.73
COL13A1-210ENST00000517713 FOPNLQ96NB1 174 aa25.86■■□□□ 1.73
COL13A1-210ENST00000517713 ELOVL6Q9H5J4 265 aa25.86■■□□□ 1.73
COL13A1-210ENST00000517713 C1orf109Q9NX04 203 aa25.86■■□□□ 1.73
COL13A1-210ENST00000517713 PRSS51A0A1B0GVH4 220 aa25.85■■□□□ 1.73
COL13A1-210ENST00000517713 RSL1D1O76021 490 aaKnown RBP25.85■■□□□ 1.73
COL13A1-210ENST00000517713 NPPAP01160 153 aa25.85■■□□□ 1.73
COL13A1-210ENST00000517713 PDHA2P29803 388 aa25.85■■□□□ 1.73
COL13A1-210ENST00000517713 YBX1P67809 324 aaKnown RBP25.85■■□□□ 1.73
COL13A1-210ENST00000517713 RHDQ02161 417 aa25.85■■□□□ 1.73
COL13A1-210ENST00000517713 CNTN1Q12860 1018 aa25.85■■□□□ 1.73
COL13A1-210ENST00000517713 SPATS1Q496A3 300 aa25.85■■□□□ 1.73
COL13A1-210ENST00000517713 ZNF658BQ4V348 819 aaPredicted RBP25.85■■□□□ 1.73
COL13A1-210ENST00000517713 SLC44A4Q53GD3 710 aa25.85■■□□□ 1.73
COL13A1-210ENST00000517713 CACHD1Q5VU97 1274 aa25.85■■□□□ 1.73
COL13A1-210ENST00000517713 FAM46CQ5VWP2 391 aa25.85■■□□□ 1.73
COL13A1-210ENST00000517713 PARM1Q6UWI2 310 aa25.85■■□□□ 1.73
COL13A1-210ENST00000517713 DHFR2Q86XF0 187 aa25.85■■□□□ 1.73
COL13A1-210ENST00000517713 DNAJB14Q8TBM8 379 aa25.85■■□□□ 1.73
COL13A1-210ENST00000517713 FOXJ1Q92949 421 aa25.85■■□□□ 1.73
COL13A1-210ENST00000517713 TMEM125Q96AQ2 219 aa25.85■■□□□ 1.73
COL13A1-210ENST00000517713 LRGUKQ96M69 825 aa25.85■■□□□ 1.73
COL13A1-210ENST00000517713 ACPTQ9BZG2 426 aa25.85■■□□□ 1.73
COL13A1-210ENST00000517713 COPS7BQ9H9Q2 264 aaPredicted RBP25.85■■□□□ 1.73
COL13A1-210ENST00000517713 TRIM39Q9HCM9 518 aa25.85■■□□□ 1.73
COL13A1-210ENST00000517713 FADS3Q9Y5Q0 445 aa25.85■■□□□ 1.73
COL13A1-210ENST00000517713 GRXCR2A6NFK2 248 aa25.85■■□□□ 1.73
COL13A1-210ENST00000517713 LILRB5O75023 590 aa25.85■■□□□ 1.73
COL13A1-210ENST00000517713 APODP05090 189 aa25.85■■□□□ 1.73
COL13A1-210ENST00000517713 N4BP2L2Q92802 583 aaPredicted RBP25.85■■□□□ 1.73
COL13A1-210ENST00000517713 MAGEB10Q96LZ2 347 aaPredicted RBP25.85■■□□□ 1.73
COL13A1-210ENST00000517713 ASIC5Q9NY37 505 aa25.85■■□□□ 1.73
COL13A1-210ENST00000517713 HALP42357 657 aa25.84■■□□□ 1.73
COL13A1-210ENST00000517713 BDKRB1P46663 353 aa25.84■■□□□ 1.73
COL13A1-210ENST00000517713 ADGRE1Q14246 886 aa25.84■■□□□ 1.73
COL13A1-210ENST00000517713 OGFRL1Q5TC84 451 aaPredicted RBP25.84■■□□□ 1.73
COL13A1-210ENST00000517713 SLC2A7Q6PXP3 512 aa25.84■■□□□ 1.73
COL13A1-210ENST00000517713 CYP2R1Q6VVX0 501 aa25.84■■□□□ 1.73
COL13A1-210ENST00000517713 NUDT18Q6ZVK8 323 aa25.84■■□□□ 1.73
COL13A1-210ENST00000517713 PDSS2Q86YH6 399 aa25.84■■□□□ 1.73
COL13A1-210ENST00000517713 TRAPPC5Q8IUR0 188 aa25.84■■□□□ 1.73
COL13A1-210ENST00000517713 LIX1Q8N485 282 aa25.84■■□□□ 1.73
COL13A1-210ENST00000517713 DPP10Q8N608 796 aa25.84■■□□□ 1.73
COL13A1-210ENST00000517713 FGF14Q92915 247 aa25.84■■□□□ 1.73
COL13A1-210ENST00000517713 ZBTB18Q99592 522 aa25.84■■□□□ 1.73
COL13A1-210ENST00000517713 STOX2Q9P2F5 926 aaPredicted RBP25.84■■□□□ 1.73
COL13A1-210ENST00000517713 GULP1Q9UBP9 304 aa25.84■■□□□ 1.73
COL13A1-210ENST00000517713 STON1Q9Y6Q2 735 aa25.84■■□□□ 1.73
COL13A1-210ENST00000517713 DOCK8Q8NF50 2099 aa25.84■■□□□ 1.73
COL13A1-210ENST00000517713 ZFC3H1O60293 1989 aaKnown RBP25.84■■□□□ 1.73
COL13A1-210ENST00000517713 TCRBV3S1A0A5B6 114 aa25.83■■□□□ 1.73
COL13A1-210ENST00000517713 H3BM21 787 aa25.83■■□□□ 1.73
COL13A1-210ENST00000517713 LIN7AO14910 233 aaPredicted RBP25.83■■□□□ 1.73
COL13A1-210ENST00000517713 PEX1O43933 1283 aa25.83■■□□□ 1.73
COL13A1-210ENST00000517713 PRAMEF4O60810 478 aa25.83■■□□□ 1.73
COL13A1-210ENST00000517713 LAMP2P13473 410 aa25.83■■□□□ 1.73
COL13A1-210ENST00000517713 VARSP26640 1264 aaKnown RBP25.83■■□□□ 1.73
COL13A1-210ENST00000517713 GTF2H3Q13889 308 aa25.83■■□□□ 1.73
COL13A1-210ENST00000517713 AAK1Q2M2I8 961 aa25.83■■□□□ 1.73
COL13A1-210ENST00000517713 ITPRIPL2Q3MIP1 535 aa25.83■■□□□ 1.73
COL13A1-210ENST00000517713 CCSMST1Q4G0I0 132 aa25.83■■□□□ 1.73
COL13A1-210ENST00000517713 PRAMEF9Q5VWM5 478 aa25.83■■□□□ 1.73
COL13A1-210ENST00000517713 AGTRAPQ6RW13 159 aa25.83■■□□□ 1.73
COL13A1-210ENST00000517713 TMEM126BQ8IUX1 230 aa25.83■■□□□ 1.73
COL13A1-210ENST00000517713 CFAP206Q8IYR0 622 aa25.83■■□□□ 1.73
COL13A1-210ENST00000517713 SLAMF8Q9P0V8 285 aa25.83■■□□□ 1.73
COL13A1-210ENST00000517713 ATXN10Q9UBB4 475 aa25.83■■□□□ 1.73
COL13A1-210ENST00000517713 RIMS3Q9UJD0 308 aa25.83■■□□□ 1.73
COL13A1-210ENST00000517713 ARNTLO00327 626 aa25.83■■□□□ 1.73
COL13A1-210ENST00000517713 NEK2P51955 445 aa25.83■■□□□ 1.73
COL13A1-210ENST00000517713 BNIP2Q12982 314 aa25.83■■□□□ 1.73
COL13A1-210ENST00000517713 CHIT1Q13231 466 aa25.83■■□□□ 1.73
COL13A1-210ENST00000517713 PTGR1Q14914 329 aa25.83■■□□□ 1.73
COL13A1-210ENST00000517713 PIP5KL1Q5T9C9 394 aa25.83■■□□□ 1.73
COL13A1-210ENST00000517713 THOC6Q86W42 341 aaKnown RBP25.83■■□□□ 1.73
COL13A1-210ENST00000517713 GALNT13Q8IUC8 556 aa25.83■■□□□ 1.73
COL13A1-210ENST00000517713 TRIM8Q9BZR9 551 aa25.83■■□□□ 1.73
COL13A1-210ENST00000517713 INTS7Q9NVH2 962 aaKnown RBP25.83■■□□□ 1.73
COL13A1-210ENST00000517713 WASP42768 502 aa25.82■■□□□ 1.72
COL13A1-210ENST00000517713 SFT2D3Q587I9 215 aa25.82■■□□□ 1.72
COL13A1-210ENST00000517713 CES5AQ6NT32 575 aa25.82■■□□□ 1.72
COL13A1-210ENST00000517713 LILRA2Q8N149 483 aa25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms