RNA–Protein interactions for RNA: ENST00000517400.5

LINC00534-201, long intergenic non-protein coding RNA 534, humanhuman

TSL 2 BASIC

Gene LINC00534, Length 793 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00534-201ENST00000517400 GOLGA8HP0CJ92 632 aa4.3□□□□□ -1.72
LINC00534-201ENST00000517400 ZNF12P17014 697 aa4.3□□□□□ -1.72
LINC00534-201ENST00000517400 SSTR2P30874 369 aa4.3□□□□□ -1.72
LINC00534-201ENST00000517400 APOBEC1P41238 236 aaKnown RBP4.3□□□□□ -1.72
LINC00534-201ENST00000517400 NRIP1P48552 1158 aa4.3□□□□□ -1.72
LINC00534-201ENST00000517400 CLCNKAP51800 687 aa4.3□□□□□ -1.72
LINC00534-201ENST00000517400 PNLIPRP2P54317 469 aa4.3□□□□□ -1.72
LINC00534-201ENST00000517400 HAND2P61296 217 aa4.3□□□□□ -1.72
LINC00534-201ENST00000517400 IFI35P80217 286 aaPredicted RBP4.3□□□□□ -1.72
LINC00534-201ENST00000517400 MAD2L1Q13257 205 aaPredicted RBP4.3□□□□□ -1.72
LINC00534-201ENST00000517400 GPM6BQ13491 265 aa4.3□□□□□ -1.72
LINC00534-201ENST00000517400 DHX34Q14147 1143 aaKnown RBP4.3□□□□□ -1.72
LINC00534-201ENST00000517400 PCLAFQ15004 111 aa4.3□□□□□ -1.72
LINC00534-201ENST00000517400 OASLQ15646 514 aaKnown RBP4.3□□□□□ -1.72
LINC00534-201ENST00000517400 NTRK2Q16620 822 aa4.3□□□□□ -1.72
LINC00534-201ENST00000517400 PAPPA-AS1Q5QFB9 102 aa4.3□□□□□ -1.72
LINC00534-201ENST00000517400 TMEM198Q66K66 360 aa4.3□□□□□ -1.72
LINC00534-201ENST00000517400 FAM122CQ6P4D5 195 aa4.3□□□□□ -1.72
LINC00534-201ENST00000517400 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.3□□□□□ -1.725e-9■■■■■ 94.4
LINC00534-201ENST00000517400 KRBA2Q6ZNG9 492 aa4.3□□□□□ -1.72
LINC00534-201ENST00000517400 PRPF39Q86UA1 669 aaKnown RBP4.3□□□□□ -1.72
LINC00534-201ENST00000517400 RPAINQ86UA6 219 aa4.3□□□□□ -1.72
LINC00534-201ENST00000517400 ARID3BQ8IVW6 561 aaPredicted RBP4.3□□□□□ -1.72
LINC00534-201ENST00000517400 PCDH20Q8N6Y1 951 aaKnown RBP4.3□□□□□ -1.72
LINC00534-201ENST00000517400 LSMEM1Q8N8F7 131 aa4.3□□□□□ -1.72
LINC00534-201ENST00000517400 Q8N9P0 234 aaPredicted RBP4.3□□□□□ -1.72
LINC00534-201ENST00000517400 IL17RCQ8NAC3 791 aa4.3□□□□□ -1.72
LINC00534-201ENST00000517400 GMCL1P1Q8NEA9 526 aa4.3□□□□□ -1.72
LINC00534-201ENST00000517400 PHOSPHO2Q8TCD6 241 aa4.3□□□□□ -1.72
LINC00534-201ENST00000517400 ELP5Q8TE02 316 aa4.3□□□□□ -1.72
LINC00534-201ENST00000517400 AFAP1L1Q8TED9 768 aa4.3□□□□□ -1.72
LINC00534-201ENST00000517400 PIBF1Q8WXW3 757 aa4.3□□□□□ -1.72
LINC00534-201ENST00000517400 SLC22A18Q96BI1 424 aa4.3□□□□□ -1.72
LINC00534-201ENST00000517400 ORAI1Q96D31 301 aa4.3□□□□□ -1.72
LINC00534-201ENST00000517400 SEZ6LQ9BYH1 1024 aa4.3□□□□□ -1.72
LINC00534-201ENST00000517400 CPVLQ9H3G5 476 aa4.3□□□□□ -1.72
LINC00534-201ENST00000517400 OSGEPL1Q9H4B0 414 aa4.3□□□□□ -1.72
LINC00534-201ENST00000517400 NOX4Q9NPH5 578 aa4.3□□□□□ -1.72
LINC00534-201ENST00000517400 ECHDC1Q9NTX5 307 aa4.3□□□□□ -1.72
LINC00534-201ENST00000517400 STK39Q9UEW8 545 aa4.3□□□□□ -1.72
LINC00534-201ENST00000517400 CTNNA3Q9UI47 895 aa4.3□□□□□ -1.72
LINC00534-201ENST00000517400 SNX9Q9Y5X1 595 aa4.3□□□□□ -1.72
LINC00534-201ENST00000517400 CFAP54Q96N23 3096 aa4.3□□□□□ -1.72
LINC00534-201ENST00000517400 SPTBN4Q9H254 2564 aa4.29□□□□□ -1.72
LINC00534-201ENST00000517400 LRRC72A6NJI9 287 aa4.29□□□□□ -1.72
LINC00534-201ENST00000517400 KCNN4O15554 427 aa4.29□□□□□ -1.72
LINC00534-201ENST00000517400 GJB5O95377 273 aa4.29□□□□□ -1.72
LINC00534-201ENST00000517400 CENPBP07199 599 aaPredicted RBP4.29□□□□□ -1.72
LINC00534-201ENST00000517400 CASTP20810 708 aaKnown RBP4.29□□□□□ -1.72
LINC00534-201ENST00000517400 UGT1A1P22309 533 aa4.29□□□□□ -1.72
LINC00534-201ENST00000517400 MSH2P43246 934 aa4.29□□□□□ -1.72
LINC00534-201ENST00000517400 HSD17B4P51659 736 aa4.29□□□□□ -1.72
LINC00534-201ENST00000517400 RRP1P56182 461 aaKnown RBP4.29□□□□□ -1.72
LINC00534-201ENST00000517400 RPS6P62753 249 aaKnown RBP4.29□□□□□ -1.72
LINC00534-201ENST00000517400 SPOCK1Q08629 439 aa4.29□□□□□ -1.72
LINC00534-201ENST00000517400 GRSF1Q12849 480 aaKnown RBP eCLIP4.29□□□□□ -1.72
LINC00534-201ENST00000517400 CDC16Q13042 620 aa4.29□□□□□ -1.72
LINC00534-201ENST00000517400 KCNC3Q14003 757 aa4.29□□□□□ -1.72
LINC00534-201ENST00000517400 NFATC4Q14934 902 aa4.29□□□□□ -1.72
LINC00534-201ENST00000517400 C15orf59Q2T9L4 293 aaPredicted RBP4.29□□□□□ -1.72
LINC00534-201ENST00000517400 EPC2Q52LR7 807 aa4.29□□□□□ -1.72
LINC00534-201ENST00000517400 SBK1Q52WX2 424 aa4.29□□□□□ -1.72
LINC00534-201ENST00000517400 SETMARQ53H47 684 aaPredicted RBP4.29□□□□□ -1.72
LINC00534-201ENST00000517400 SPOUT1Q5T280 376 aaKnown RBP4.29□□□□□ -1.72
LINC00534-201ENST00000517400 MFSD4BQ5TF39 518 aa4.29□□□□□ -1.72
LINC00534-201ENST00000517400 ARHGEF16Q5VV41 709 aa4.29□□□□□ -1.72
LINC00534-201ENST00000517400 ZNF280DQ6N043 979 aa4.29□□□□□ -1.72
LINC00534-201ENST00000517400 WDR73Q6P4I2 378 aa4.29□□□□□ -1.72
LINC00534-201ENST00000517400 BRAT1Q6PJG6 821 aa4.29□□□□□ -1.72
LINC00534-201ENST00000517400 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.29□□□□□ -1.72
LINC00534-201ENST00000517400 RBM23Q86U06 439 aaKnown RBP4.29□□□□□ -1.72
LINC00534-201ENST00000517400 GLCCI1Q86VQ1 547 aa4.29□□□□□ -1.72
LINC00534-201ENST00000517400 OR8H2Q8N162 312 aa4.29□□□□□ -1.72
LINC00534-201ENST00000517400 SCML4Q8N228 414 aa4.29□□□□□ -1.72
LINC00534-201ENST00000517400 KBTBD3Q8NAB2 608 aa4.29□□□□□ -1.72
LINC00534-201ENST00000517400 ZNF114Q8NC26 417 aa4.29□□□□□ -1.72
LINC00534-201ENST00000517400 OR2AK2Q8NG84 335 aa4.29□□□□□ -1.72
LINC00534-201ENST00000517400 PRPF31Q8WWY3 499 aaKnown RBP4.29□□□□□ -1.72
LINC00534-201ENST00000517400 RHBDF1Q96CC6 855 aa4.29□□□□□ -1.72
LINC00534-201ENST00000517400 ERP27Q96DN0 273 aa4.29□□□□□ -1.72
LINC00534-201ENST00000517400 MRPL38Q96DV4 380 aaKnown RBP4.29□□□□□ -1.72
LINC00534-201ENST00000517400 MTBPQ96DY7 904 aa4.29□□□□□ -1.72
LINC00534-201ENST00000517400 SCMH1Q96GD3 660 aa4.29□□□□□ -1.72
LINC00534-201ENST00000517400 RPGRIP1Q96KN7 1286 aa4.29□□□□□ -1.72
LINC00534-201ENST00000517400 DACH2Q96NX9 599 aa4.29□□□□□ -1.72
LINC00534-201ENST00000517400 FIZ1Q96SL8 496 aa4.29□□□□□ -1.72
LINC00534-201ENST00000517400 UPF3BQ9BZI7 483 aaKnown RBP4.29□□□□□ -1.72
LINC00534-201ENST00000517400 TRMT1Q9NXH9 659 aaKnown RBP4.29□□□□□ -1.72
LINC00534-201ENST00000517400 C1RLQ9NZP8 487 aa4.29□□□□□ -1.72
LINC00534-201ENST00000517400 MRPL15Q9P015 296 aaKnown RBP4.29□□□□□ -1.72
LINC00534-201ENST00000517400 LOXL2Q9Y4K0 774 aa4.29□□□□□ -1.72
LINC00534-201ENST00000517400 DMDP11532 3685 aa4.29□□□□□ -1.72
LINC00534-201ENST00000517400 COL4A4P53420 1690 aaPredicted RBP4.29□□□□□ -1.72
LINC00534-201ENST00000517400 PTPRZ1P23471 2315 aaPredicted RBP4.28□□□□□ -1.72
LINC00534-201ENST00000517400 MYO7AQ13402 2215 aa4.28□□□□□ -1.72
LINC00534-201ENST00000517400 IGLV5-37A0A075B6J1 123 aa4.28□□□□□ -1.72
LINC00534-201ENST00000517400 IGKV6D-41A0A0C4DH26 115 aa4.28□□□□□ -1.72
LINC00534-201ENST00000517400 SYNDIG1LA6NDD5 238 aa4.28□□□□□ -1.72
LINC00534-201ENST00000517400 EIF4E1BA6NMX2 242 aaKnown RBP4.28□□□□□ -1.72
LINC00534-201ENST00000517400 RSPH10B2B2RC85 870 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms