RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 RPS3AP61247 264 aaKnown RBP-1.45□□□□□ -2.64
SNORA40.16-201ENST00000517238 ERVK-16P61578 105 aa-1.45□□□□□ -2.64
SNORA40.16-201ENST00000517238 NKX6-1P78426 367 aaPredicted RBP-1.45□□□□□ -2.64
SNORA40.16-201ENST00000517238 DHODHQ02127 395 aa-1.45□□□□□ -2.64
SNORA40.16-201ENST00000517238 SLC18A2Q05940 514 aa-1.45□□□□□ -2.64
SNORA40.16-201ENST00000517238 MADCAM1Q13477 382 aa-1.45□□□□□ -2.64
SNORA40.16-201ENST00000517238 EFTUD2Q15029 972 aaKnown RBP eCLIP-1.45□□□□□ -2.64
SNORA40.16-201ENST00000517238 ITPRIPL2Q3MIP1 535 aa-1.45□□□□□ -2.64
SNORA40.16-201ENST00000517238 COBLL1Q53SF7 1204 aa-1.45□□□□□ -2.64
SNORA40.16-201ENST00000517238 AGAP6Q5VW22 663 aa-1.45□□□□□ -2.64
SNORA40.16-201ENST00000517238 DUS1LQ6P1R4 473 aaKnown RBP-1.45□□□□□ -2.64
SNORA40.16-201ENST00000517238 CCDC174Q6PII3 467 aa-1.45□□□□□ -2.64
SNORA40.16-201ENST00000517238 SLC25A47Q6Q0C1 308 aa-1.45□□□□□ -2.64
SNORA40.16-201ENST00000517238 KLHL17Q6TDP4 642 aa-1.45□□□□□ -2.64
SNORA40.16-201ENST00000517238 Q6ZRN7 208 aaPredicted RBP-1.45□□□□□ -2.64
SNORA40.16-201ENST00000517238 UNC13DQ70J99 1090 aa-1.45□□□□□ -2.64
SNORA40.16-201ENST00000517238 SESTD1Q86VW0 696 aa-1.45□□□□□ -2.64
SNORA40.16-201ENST00000517238 LRRC49Q8IUZ0 686 aa-1.45□□□□□ -2.64
SNORA40.16-201ENST00000517238 KIRREL3Q8IZU9 778 aa-1.45□□□□□ -2.64
SNORA40.16-201ENST00000517238 VPS52Q8N1B4 723 aa-1.45□□□□□ -2.64
SNORA40.16-201ENST00000517238 ENDOVQ8N8Q3 282 aaKnown RBP-1.45□□□□□ -2.64
SNORA40.16-201ENST00000517238 SCAIQ8N9R8 606 aa-1.45□□□□□ -2.64
SNORA40.16-201ENST00000517238 AVL9Q8NBF6 648 aa-1.45□□□□□ -2.64
SNORA40.16-201ENST00000517238 HJURPQ8NCD3 748 aaPredicted RBP-1.45□□□□□ -2.64
SNORA40.16-201ENST00000517238 OR2L3Q8NG85 312 aa-1.45□□□□□ -2.64
SNORA40.16-201ENST00000517238 C9orf43Q8TAL5 461 aaPredicted RBP-1.45□□□□□ -2.64
SNORA40.16-201ENST00000517238 THAP6Q8TBB0 222 aa-1.45□□□□□ -2.64
SNORA40.16-201ENST00000517238 EGLN2Q96KS0 407 aa-1.45□□□□□ -2.64
SNORA40.16-201ENST00000517238 FAM20AQ96MK3 541 aa-1.45□□□□□ -2.64
SNORA40.16-201ENST00000517238 PRAM1Q96QH2 718 aa-1.45□□□□□ -2.64
SNORA40.16-201ENST00000517238 MCCC1Q96RQ3 725 aaPredicted RBP-1.45□□□□□ -2.64
SNORA40.16-201ENST00000517238 FAM173AQ9BQD7 235 aa-1.45□□□□□ -2.64
SNORA40.16-201ENST00000517238 EIF2AK1Q9BQI3 630 aaKnown RBP-1.45□□□□□ -2.64
SNORA40.16-201ENST00000517238 TMEM120AQ9BXJ8 343 aa-1.45□□□□□ -2.64
SNORA40.16-201ENST00000517238 NMNAT2Q9BZQ4 307 aa-1.45□□□□□ -2.64
SNORA40.16-201ENST00000517238 VTA1Q9NP79 307 aa-1.45□□□□□ -2.64
SNORA40.16-201ENST00000517238 KCNK9Q9NPC2 374 aa-1.45□□□□□ -2.64
SNORA40.16-201ENST00000517238 TBC1D23Q9NUY8 699 aa-1.45□□□□□ -2.64
SNORA40.16-201ENST00000517238 HAO1Q9UJM8 370 aa-1.45□□□□□ -2.64
SNORA40.16-201ENST00000517238 KLHL21Q9UJP4 597 aa-1.45□□□□□ -2.64
SNORA40.16-201ENST00000517238 FBXL5Q9UKA1 691 aa-1.45□□□□□ -2.64
SNORA40.16-201ENST00000517238 ITGA11Q9UKX5 1188 aa-1.45□□□□□ -2.64
SNORA40.16-201ENST00000517238 CDH9Q9ULB4 789 aa-1.45□□□□□ -2.64
SNORA40.16-201ENST00000517238 PPP2R2CQ9Y2T4 447 aa-1.45□□□□□ -2.64
SNORA40.16-201ENST00000517238 AUP1Q9Y679 476 aa-1.45□□□□□ -2.64
SNORA40.16-201ENST00000517238 DGKBQ9Y6T7 804 aa-1.45□□□□□ -2.64
SNORA40.16-201ENST00000517238 KAT6BQ8WYB5 2073 aa-1.45□□□□□ -2.64
SNORA40.16-201ENST00000517238 IL16Q14005 1332 aa-1.45□□□□□ -2.64
SNORA40.16-201ENST00000517238 NF1P21359 2839 aa-1.45□□□□□ -2.64
SNORA40.16-201ENST00000517238 CACNA1AO00555 2505 aa-1.45□□□□□ -2.64
SNORA40.16-201ENST00000517238 SEC24AO95486 1093 aa-1.46□□□□□ -2.64
SNORA40.16-201ENST00000517238 CD4P01730 458 aa-1.46□□□□□ -2.64
SNORA40.16-201ENST00000517238 CYC1P08574 325 aa-1.46□□□□□ -2.64
SNORA40.16-201ENST00000517238 MUC1P15941 1255 aaPredicted RBP-1.46□□□□□ -2.64
SNORA40.16-201ENST00000517238 CCNCP24863 283 aa-1.46□□□□□ -2.64
SNORA40.16-201ENST00000517238 GDI1P31150 447 aa-1.46□□□□□ -2.64
SNORA40.16-201ENST00000517238 PIK3CBP42338 1070 aa-1.46□□□□□ -2.64
SNORA40.16-201ENST00000517238 CENPAP49450 140 aa-1.46□□□□□ -2.64
SNORA40.16-201ENST00000517238 CDKN1CP49918 316 aaPredicted RBP-1.46□□□□□ -2.64
SNORA40.16-201ENST00000517238 CCR3P51677 355 aa-1.46□□□□□ -2.64
SNORA40.16-201ENST00000517238 THOP1P52888 689 aa-1.46□□□□□ -2.64
SNORA40.16-201ENST00000517238 ARFIP2P53365 341 aa-1.46□□□□□ -2.64
SNORA40.16-201ENST00000517238 CTAG1AP78358 180 aa-1.46□□□□□ -2.64
SNORA40.16-201ENST00000517238 IRX4P78413 519 aa-1.46□□□□□ -2.64
SNORA40.16-201ENST00000517238 MAP2K1Q02750 393 aaPredicted RBP-1.46□□□□□ -2.64
SNORA40.16-201ENST00000517238 ACAP2Q15057 778 aa-1.46□□□□□ -2.64
SNORA40.16-201ENST00000517238 FAM83EQ2M2I3 478 aa-1.46□□□□□ -2.64
SNORA40.16-201ENST00000517238 KLHL26Q53HC5 615 aa-1.46□□□□□ -2.64
SNORA40.16-201ENST00000517238 BRDTQ58F21 947 aaPredicted RBP-1.46□□□□□ -2.64
SNORA40.16-201ENST00000517238 ZNF766Q5HY98 468 aa-1.46□□□□□ -2.64
SNORA40.16-201ENST00000517238 PAQR9Q6ZVX9 377 aa-1.46□□□□□ -2.64
SNORA40.16-201ENST00000517238 SLC24A5Q71RS6 500 aa-1.46□□□□□ -2.64
SNORA40.16-201ENST00000517238 LRRTM3Q86VH5 581 aa-1.46□□□□□ -2.64
SNORA40.16-201ENST00000517238 APOBEC3FQ8IUX4 373 aaKnown RBP-1.46□□□□□ -2.64
SNORA40.16-201ENST00000517238 GBGT1Q8N5D6 347 aa-1.46□□□□□ -2.64
SNORA40.16-201ENST00000517238 SLC5A8Q8N695 610 aa-1.46□□□□□ -2.64
SNORA40.16-201ENST00000517238 ANKRD42Q8N9B4 389 aa-1.46□□□□□ -2.64
SNORA40.16-201ENST00000517238 DCAF4L2Q8NA75 395 aa-1.46□□□□□ -2.64
SNORA40.16-201ENST00000517238 ACBD4Q8NC06 268 aa-1.46□□□□□ -2.64
SNORA40.16-201ENST00000517238 MDS2Q8NDY4 140 aa-1.46□□□□□ -2.64
SNORA40.16-201ENST00000517238 OR10G2Q8NGC3 310 aa-1.46□□□□□ -2.64
SNORA40.16-201ENST00000517238 CFAP61Q8NHU2 1237 aa-1.46□□□□□ -2.64
SNORA40.16-201ENST00000517238 UBALD1Q8TB05 177 aa-1.46□□□□□ -2.64
SNORA40.16-201ENST00000517238 RAET1EQ8TD07 263 aa-1.46□□□□□ -2.64
SNORA40.16-201ENST00000517238 GATAD1Q8WUU5 269 aa-1.46□□□□□ -2.64
SNORA40.16-201ENST00000517238 ZDHHC19Q8WVZ1 309 aaPredicted RBP-1.46□□□□□ -2.64
SNORA40.16-201ENST00000517238 CHCHD10Q8WYQ3 142 aaPredicted RBP-1.46□□□□□ -2.64
SNORA40.16-201ENST00000517238 WRAP53Q9BUR4 548 aaKnown RBP-1.46□□□□□ -2.64
SNORA40.16-201ENST00000517238 TRIM31Q9BZY9 425 aa-1.46□□□□□ -2.64
SNORA40.16-201ENST00000517238 CCDC113Q9H0I3 377 aa-1.46□□□□□ -2.64
SNORA40.16-201ENST00000517238 SMURF2Q9HAU4 748 aa-1.46□□□□□ -2.64
SNORA40.16-201ENST00000517238 SOHLH2Q9NX45 425 aa-1.46□□□□□ -2.64
SNORA40.16-201ENST00000517238 UPB1Q9UBR1 384 aa-1.46□□□□□ -2.64
SNORA40.16-201ENST00000517238 BAIAP2L1Q9UHR4 511 aa-1.46□□□□□ -2.64
SNORA40.16-201ENST00000517238 SERPINB13Q9UIV8 391 aa-1.46□□□□□ -2.64
SNORA40.16-201ENST00000517238 PADI3Q9ULW8 664 aa-1.46□□□□□ -2.64
SNORA40.16-201ENST00000517238 DUSP12Q9UNI6 340 aa-1.46□□□□□ -2.64
SNORA40.16-201ENST00000517238 SLC12A4Q9UP95 1085 aa-1.46□□□□□ -2.64
SNORA40.16-201ENST00000517238 ERVW-1Q9UQF0 538 aa-1.46□□□□□ -2.64
SNORA40.16-201ENST00000517238 NFE2L3Q9Y4A8 694 aa-1.46□□□□□ -2.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms