RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 FAM118AQ9NWS6 357 aa7.26□□□□□ -1.25
CLIP1-205ENST00000514271 TRNAU1APQ9NX07 287 aaKnown RBP7.26□□□□□ -1.25
CLIP1-205ENST00000514271 NSMCE4AQ9NXX6 385 aa7.26□□□□□ -1.25
CLIP1-205ENST00000514271 ZIM2Q9NZV7 527 aa7.26□□□□□ -1.25
CLIP1-205ENST00000514271 POU2F3Q9UKI9 436 aa7.26□□□□□ -1.25
CLIP1-205ENST00000514271 MAGED2Q9UNF1 606 aaPredicted RBP7.26□□□□□ -1.25
CLIP1-205ENST00000514271 AP4E1Q9UPM8 1137 aa7.26□□□□□ -1.25
CLIP1-205ENST00000514271 J3QRK9 145 aa7.26□□□□□ -1.25
CLIP1-205ENST00000514271 ARHGAP33O14559 1287 aa7.26□□□□□ -1.25
CLIP1-205ENST00000514271 SEC22BO75396 215 aa7.26□□□□□ -1.25
CLIP1-205ENST00000514271 ESRRBO95718 433 aa7.26□□□□□ -1.25
CLIP1-205ENST00000514271 CKMP06732 381 aa7.26□□□□□ -1.25
CLIP1-205ENST00000514271 RPS17P08708 135 aaKnown RBP7.26□□□□□ -1.25
CLIP1-205ENST00000514271 F7P08709 466 aaPredicted RBP7.26□□□□□ -1.25
CLIP1-205ENST00000514271 IL9P15248 144 aa7.26□□□□□ -1.25
CLIP1-205ENST00000514271 PDGFRAP16234 1089 aa7.26□□□□□ -1.25
CLIP1-205ENST00000514271 GGT1P19440 569 aa7.26□□□□□ -1.25
CLIP1-205ENST00000514271 ENDOUP21128 410 aaKnown RBP7.26□□□□□ -1.25
CLIP1-205ENST00000514271 CES1P23141 567 aa7.26□□□□□ -1.25
CLIP1-205ENST00000514271 ELK4P28324 431 aa7.26□□□□□ -1.25
CLIP1-205ENST00000514271 MAPK1P28482 360 aa7.26□□□□□ -1.25
CLIP1-205ENST00000514271 RPS9P46781 194 aaKnown RBP7.26□□□□□ -1.25
CLIP1-205ENST00000514271 PITX1P78337 314 aaPredicted RBP7.26□□□□□ -1.25
CLIP1-205ENST00000514271 PCDH1Q08174 1060 aa7.26□□□□□ -1.25
CLIP1-205ENST00000514271 GPR50Q13585 617 aa7.26□□□□□ -1.25
CLIP1-205ENST00000514271 E2F2Q14209 437 aa7.26□□□□□ -1.25
CLIP1-205ENST00000514271 BSPRYQ5W0U4 402 aa7.26□□□□□ -1.25
CLIP1-205ENST00000514271 KIAA0930Q6ICG6 404 aaPredicted RBP7.26□□□□□ -1.25
CLIP1-205ENST00000514271 KIAA0408Q6ZU52 694 aa7.26□□□□□ -1.25
CLIP1-205ENST00000514271 FRA10AC1Q70Z53 315 aa7.26□□□□□ -1.25
CLIP1-205ENST00000514271 TRMT11Q7Z4G4 463 aaKnown RBP7.26□□□□□ -1.25
CLIP1-205ENST00000514271 TEX26Q8N6G2 289 aa7.26□□□□□ -1.25
CLIP1-205ENST00000514271 HEXDCQ8WVB3 486 aa7.26□□□□□ -1.25
CLIP1-205ENST00000514271 FBXL8Q96CD0 374 aa7.26□□□□□ -1.25
CLIP1-205ENST00000514271 LRRC58Q96CX6 371 aa7.26□□□□□ -1.25
CLIP1-205ENST00000514271 ST6GAL2Q96JF0 529 aa7.26□□□□□ -1.25
CLIP1-205ENST00000514271 TAPBPLQ9BX59 468 aa7.26□□□□□ -1.25
CLIP1-205ENST00000514271 WDR12Q9GZL7 423 aaKnown RBP7.26□□□□□ -1.25
CLIP1-205ENST00000514271 FBRSQ9HAH7 460 aa7.26□□□□□ -1.25
CLIP1-205ENST00000514271 TMEM30AQ9NV96 361 aa7.26□□□□□ -1.25
CLIP1-205ENST00000514271 AIG1Q9NVV5 245 aa7.26□□□□□ -1.25
CLIP1-205ENST00000514271 MARCH2Q9P0N8 246 aa7.26□□□□□ -1.25
CLIP1-205ENST00000514271 PCDHGA3Q9Y5H0 932 aa7.26□□□□□ -1.25
CLIP1-205ENST00000514271 HSPE1-MOB4S4R3N1 261 aa7.26□□□□□ -1.25
CLIP1-205ENST00000514271 METTL15A6NJ78 407 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 EI24O14681 340 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 UPK1BO75841 260 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 TSPAN12O95859 305 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 S100A1P23297 94 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 PGGT1BP53609 377 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 CRYBA2P53672 197 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 ARSFP54793 590 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 GABREP78334 506 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 ZXDAP98168 799 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 HSPA14Q0VDF9 509 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 ZNF846Q147U1 533 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 ITPRIPL2Q3MIP1 535 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 C5orf22Q49AR2 442 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 MPPE1Q53F39 396 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 FAM78AQ5JUQ0 283 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 OR6B2Q6IFH4 312 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 ZNF549Q6P9A3 640 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 TSEN54Q7Z6J9 526 aaKnown RBP7.25□□□□□ -1.25
CLIP1-205ENST00000514271 TTC9BQ8N6N2 239 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 LILRB4Q8NHJ6 448 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 ITFG1Q8TB96 612 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 EDAQ92838 391 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.25□□□□□ -1.25
CLIP1-205ENST00000514271 PTERQ96BW5 349 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 MUS81Q96NY9 551 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 SOSTQ9BQB4 213 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 SLC46A2Q9BY10 475 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 ZNF700Q9H0M5 742 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 RIMKLBQ9ULI2 386 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 PCDHGB3Q9Y5G1 929 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 TRIOBPQ9H2D6 2365 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 DOCK8Q8NF50 2099 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 A0A1W2PQH9 124 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 DHRS12A0PJE2 317 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 SYNDIG1LA6NDD5 238 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 HEPACAM2A8MVW5 462 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 CLDN25C9JDP6 229 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 TAF4O00268 1085 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 HLA-DQB1P01920 261 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 ENO2P09104 434 aaPredicted RBP7.25□□□□□ -1.25
CLIP1-205ENST00000514271 TRAPPC2P0DI81 140 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 TRAPPC2BP0DI82 140 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 CDH1P12830 882 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 NELFEP18615 380 aaKnown RBP7.25□□□□□ -1.25
CLIP1-205ENST00000514271 ATP5F1P24539 256 aaPredicted RBP7.25□□□□□ -1.25
CLIP1-205ENST00000514271 CCR1P32246 355 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 GRK3P35626 688 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 ETFBP38117 255 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 STARD6P59095 220 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 EMX1Q04741 257 aaPredicted RBP7.25□□□□□ -1.25
CLIP1-205ENST00000514271 PRKCDQ05655 676 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 STX5Q13190 355 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 YIF1BQ5BJH7 314 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 C10orf120Q5SQS8 335 aa7.25□□□□□ -1.25
CLIP1-205ENST00000514271 FAM102AQ5T9C2 384 aaPredicted RBP7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms