RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-223ENST00000514267 CLYBLQ8N0X4 340 aa3.27□□□□□ -1.89
CALCOCO2-223ENST00000514267 RDM1Q8NG50 284 aa3.27□□□□□ -1.89
CALCOCO2-223ENST00000514267 SPATA20Q8TB22 786 aa3.27□□□□□ -1.89
CALCOCO2-223ENST00000514267 KRT35Q92764 455 aa3.27□□□□□ -1.89
CALCOCO2-223ENST00000514267 PIGTQ969N2 578 aa3.27□□□□□ -1.89
CALCOCO2-223ENST00000514267 SNX21Q969T3 373 aa3.27□□□□□ -1.89
CALCOCO2-223ENST00000514267 OTUB1Q96FW1 271 aaPredicted RBP3.27□□□□□ -1.89
CALCOCO2-223ENST00000514267 MYADMQ96S97 322 aa3.27□□□□□ -1.89
CALCOCO2-223ENST00000514267 FNDC11Q9BVV2 318 aa3.27□□□□□ -1.89
CALCOCO2-223ENST00000514267 ACAT2Q9BWD1 397 aa3.27□□□□□ -1.89
CALCOCO2-223ENST00000514267 SLA2Q9H6Q3 261 aa3.27□□□□□ -1.89
CALCOCO2-223ENST00000514267 TBC1D17Q9HA65 648 aa3.27□□□□□ -1.89
CALCOCO2-223ENST00000514267 LMAN1LQ9HAT1 526 aa3.27□□□□□ -1.89
CALCOCO2-223ENST00000514267 CDH20Q9HBT6 801 aa3.27□□□□□ -1.89
CALCOCO2-223ENST00000514267 MYNNQ9NPC7 610 aa3.27□□□□□ -1.89
CALCOCO2-223ENST00000514267 CNIH4Q9P003 139 aa3.27□□□□□ -1.89
CALCOCO2-223ENST00000514267 SEPT10Q9P0V9 454 aa3.27□□□□□ -1.89
CALCOCO2-223ENST00000514267 MOSPD1Q9UJG1 213 aa3.27□□□□□ -1.89
CALCOCO2-223ENST00000514267 MAP3K1Q13233 1512 aa3.27□□□□□ -1.89
CALCOCO2-223ENST00000514267 ERCC6Q03468 1493 aa3.27□□□□□ -1.89
CALCOCO2-223ENST00000514267 FYCO1Q9BQS8 1478 aa3.27□□□□□ -1.89
CALCOCO2-223ENST00000514267 CASKIN1Q8WXD9 1431 aa3.27□□□□□ -1.89
CALCOCO2-223ENST00000514267 SPAG9O60271 1321 aaKnown RBP3.26□□□□□ -1.89
CALCOCO2-223ENST00000514267 MED19A0JLT2 244 aaPredicted RBP3.26□□□□□ -1.89
CALCOCO2-223ENST00000514267 OR5K3A6NET4 321 aa3.26□□□□□ -1.89
CALCOCO2-223ENST00000514267 FAM86B1E9PN63 330 aa3.26□□□□□ -1.89
CALCOCO2-223ENST00000514267 MEIS2O14770 477 aa3.26□□□□□ -1.89
CALCOCO2-223ENST00000514267 AP5Z1O43299 807 aa3.26□□□□□ -1.89
CALCOCO2-223ENST00000514267 PGLSO95336 258 aa3.26□□□□□ -1.89
CALCOCO2-223ENST00000514267 GCNT3O95395 438 aa3.26□□□□□ -1.89
CALCOCO2-223ENST00000514267 OLFM2O95897 454 aa3.26□□□□□ -1.89
CALCOCO2-223ENST00000514267 IGHV2-70P01814 119 aa3.26□□□□□ -1.89
CALCOCO2-223ENST00000514267 C9P02748 559 aa3.26□□□□□ -1.89
CALCOCO2-223ENST00000514267 FAM86B2P0C5J1 330 aa3.26□□□□□ -1.89
CALCOCO2-223ENST00000514267 SPP1P10451 314 aa3.26□□□□□ -1.89
CALCOCO2-223ENST00000514267 MYL6BP14649 208 aa3.26□□□□□ -1.89
CALCOCO2-223ENST00000514267 EPCAMP16422 314 aa3.26□□□□□ -1.89
CALCOCO2-223ENST00000514267 ZNF23P17027 643 aa3.26□□□□□ -1.89
CALCOCO2-223ENST00000514267 CYP11B2P19099 503 aa3.26□□□□□ -1.89
CALCOCO2-223ENST00000514267 CD22P20273 847 aa3.26□□□□□ -1.89
CALCOCO2-223ENST00000514267 S1PR1P21453 382 aa3.26□□□□□ -1.89
CALCOCO2-223ENST00000514267 HSD17B3P37058 310 aa3.26□□□□□ -1.89
CALCOCO2-223ENST00000514267 WNT5AP41221 380 aa3.26□□□□□ -1.89
CALCOCO2-223ENST00000514267 FRKP42685 505 aaPredicted RBP3.26□□□□□ -1.89
CALCOCO2-223ENST00000514267 PCYT1AP49585 367 aa3.26□□□□□ -1.89
CALCOCO2-223ENST00000514267 CD81P60033 236 aa3.26□□□□□ -1.89
CALCOCO2-223ENST00000514267 EEF1A1P68104 462 aaKnown RBP3.26□□□□□ -1.89
CALCOCO2-223ENST00000514267 ABATP80404 500 aa3.26□□□□□ -1.89
CALCOCO2-223ENST00000514267 C17orf67Q0P5P2 114 aa3.26□□□□□ -1.89
CALCOCO2-223ENST00000514267 HYAL1Q12794 435 aa3.26□□□□□ -1.89
CALCOCO2-223ENST00000514267 PNRC1Q12796 327 aaPredicted RBP3.26□□□□□ -1.89
CALCOCO2-223ENST00000514267 RPA4Q13156 261 aa3.26□□□□□ -1.89
CALCOCO2-223ENST00000514267 TNK1Q13470 666 aa3.26□□□□□ -1.89
CALCOCO2-223ENST00000514267 CUL3Q13618 768 aa3.26□□□□□ -1.89
CALCOCO2-223ENST00000514267 ZNF234Q14588 700 aa3.26□□□□□ -1.89
CALCOCO2-223ENST00000514267 CALCRLQ16602 461 aa3.26□□□□□ -1.89
CALCOCO2-223ENST00000514267 PAPPA-AS1Q5QFB9 102 aa3.26□□□□□ -1.89
CALCOCO2-223ENST00000514267 EEF1A1P5Q5VTE0 462 aa3.26□□□□□ -1.89
CALCOCO2-223ENST00000514267 CASC4Q6P4E1 433 aa3.26□□□□□ -1.89
CALCOCO2-223ENST00000514267 KLC3Q6P597 504 aa3.26□□□□□ -1.89
CALCOCO2-223ENST00000514267 SLC27A1Q6PCB7 646 aa3.26□□□□□ -1.89
CALCOCO2-223ENST00000514267 CNSTQ6PJW8 725 aa3.26□□□□□ -1.89
CALCOCO2-223ENST00000514267 PLEKHM3Q6ZWE6 761 aa3.26□□□□□ -1.89
CALCOCO2-223ENST00000514267 RNF113BQ8IZP6 322 aaKnown RBP3.26□□□□□ -1.89
CALCOCO2-223ENST00000514267 NEXN-AS1Q8NBZ9 246 aa3.26□□□□□ -1.89
CALCOCO2-223ENST00000514267 OR52I2Q8NH67 350 aa3.26□□□□□ -1.89
CALCOCO2-223ENST00000514267 HMGCLL1Q8TB92 370 aa3.26□□□□□ -1.89
CALCOCO2-223ENST00000514267 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.26□□□□□ -1.89
CALCOCO2-223ENST00000514267 HEXDCQ8WVB3 486 aa3.26□□□□□ -1.89
CALCOCO2-223ENST00000514267 SLC44A1Q8WWI5 657 aa3.26□□□□□ -1.89
CALCOCO2-223ENST00000514267 NSMAFQ92636 917 aa3.26□□□□□ -1.89
CALCOCO2-223ENST00000514267 CENPTQ96BT3 561 aa3.26□□□□□ -1.89
CALCOCO2-223ENST00000514267 SNRNP40Q96DI7 357 aaKnown RBP3.26□□□□□ -1.89
CALCOCO2-223ENST00000514267 RTP4Q96DX8 246 aa3.26□□□□□ -1.89
CALCOCO2-223ENST00000514267 MTBPQ96DY7 904 aa3.26□□□□□ -1.89
CALCOCO2-223ENST00000514267 AK8Q96MA6 479 aa3.26□□□□□ -1.89
CALCOCO2-223ENST00000514267 SPATA33Q96N06 139 aa3.26□□□□□ -1.89
CALCOCO2-223ENST00000514267 ZNF582Q96NG8 517 aaPredicted RBP3.26□□□□□ -1.89
CALCOCO2-223ENST00000514267 OR1F2PQ96R84 312 aa3.26□□□□□ -1.89
CALCOCO2-223ENST00000514267 SEMA6AQ9H2E6 1030 aa3.26□□□□□ -1.89
CALCOCO2-223ENST00000514267 NOX4Q9NPH5 578 aa3.26□□□□□ -1.89
CALCOCO2-223ENST00000514267 TMEM30AQ9NV96 361 aa3.26□□□□□ -1.89
CALCOCO2-223ENST00000514267 NPAP1Q9NZP6 1156 aa3.26□□□□□ -1.89
CALCOCO2-223ENST00000514267 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.26□□□□□ -1.895e-7■■■■□ 24.9
CALCOCO2-223ENST00000514267 INSL5Q9Y5Q6 135 aa3.26□□□□□ -1.89
CALCOCO2-223ENST00000514267 SNX9Q9Y5X1 595 aa3.26□□□□□ -1.89
CALCOCO2-223ENST00000514267 PTGDR2Q9Y5Y4 395 aa3.26□□□□□ -1.89
CALCOCO2-223ENST00000514267 AQRO60306 1485 aaKnown RBP eCLIP3.26□□□□□ -1.89
CALCOCO2-223ENST00000514267 MRC2Q9UBG0 1479 aa3.26□□□□□ -1.89
CALCOCO2-223ENST00000514267 CFAP43Q8NDM7 1665 aa3.26□□□□□ -1.89
CALCOCO2-223ENST00000514267 A0A1W2PRV1 198 aa3.25□□□□□ -1.89
CALCOCO2-223ENST00000514267 CLEC18AA5D8T8 446 aa3.25□□□□□ -1.89
CALCOCO2-223ENST00000514267 INAFM1C9JVW0 142 aa3.25□□□□□ -1.89
CALCOCO2-223ENST00000514267 PGRMC2O15173 223 aa3.25□□□□□ -1.89
CALCOCO2-223ENST00000514267 EIF3DO15371 548 aaKnown RBP eCLIP3.25□□□□□ -1.89
CALCOCO2-223ENST00000514267 KCNJ13O60928 360 aa3.25□□□□□ -1.89
CALCOCO2-223ENST00000514267 PAPSS2O95340 614 aaPredicted RBP3.25□□□□□ -1.89
CALCOCO2-223ENST00000514267 BMP10O95393 424 aa3.25□□□□□ -1.89
CALCOCO2-223ENST00000514267 H1F0P07305 194 aaKnown RBP3.25□□□□□ -1.89
CALCOCO2-223ENST00000514267 TCF4P15884 667 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms