RNA–Protein interactions for RNA: ENST00000513440.5

CLOCK-211, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 3,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-211ENST00000513440 C1orf109Q9NX04 203 aa13.73□□□□□ -0.21
CLOCK-211ENST00000513440 ATP11BQ9Y2G3 1177 aa13.73□□□□□ -0.21
CLOCK-211ENST00000513440 NEDD8-MDP1E9PL57 170 aa13.73□□□□□ -0.21
CLOCK-211ENST00000513440 UPK1AO00322 258 aa13.73□□□□□ -0.21
CLOCK-211ENST00000513440 AREL1O15033 823 aa13.73□□□□□ -0.21
CLOCK-211ENST00000513440 SRCP12931 536 aa13.73□□□□□ -0.21
CLOCK-211ENST00000513440 PSMA3P25788 255 aa13.73□□□□□ -0.21
CLOCK-211ENST00000513440 S100A3P33764 101 aa13.73□□□□□ -0.21
CLOCK-211ENST00000513440 GTF2H3Q13889 308 aa13.73□□□□□ -0.21
CLOCK-211ENST00000513440 C16orf72Q14CZ0 275 aa13.73□□□□□ -0.21
CLOCK-211ENST00000513440 BORAQ6PGQ7 559 aa13.73□□□□□ -0.21
CLOCK-211ENST00000513440 ERI1Q8IV48 349 aaKnown RBP13.73□□□□□ -0.21
CLOCK-211ENST00000513440 LMNTD1Q8N9Z9 388 aa13.73□□□□□ -0.21
CLOCK-211ENST00000513440 NETO1Q8TDF5 533 aa13.73□□□□□ -0.21
CLOCK-211ENST00000513440 FRS2Q8WU20 508 aa13.73□□□□□ -0.21
CLOCK-211ENST00000513440 SLC22A17Q8WUG5 538 aa13.73□□□□□ -0.21
CLOCK-211ENST00000513440 SNRNP27Q8WVK2 155 aaKnown RBP13.73□□□□□ -0.21
CLOCK-211ENST00000513440 APIPQ96GX9 242 aa13.73□□□□□ -0.21
CLOCK-211ENST00000513440 DGCR6LQ9BY27 220 aa13.73□□□□□ -0.21
CLOCK-211ENST00000513440 MYO1GB0I1T2 1018 aa13.72□□□□□ -0.21
CLOCK-211ENST00000513440 PITPNM1O00562 1244 aa13.72□□□□□ -0.21
CLOCK-211ENST00000513440 CCL16O15467 120 aa13.72□□□□□ -0.21
CLOCK-211ENST00000513440 PFDN1O60925 122 aa13.72□□□□□ -0.21
CLOCK-211ENST00000513440 HIST1H2AGP0C0S8 130 aaPredicted RBP13.72□□□□□ -0.21
CLOCK-211ENST00000513440 HIST1H2ADP20671 130 aa13.72□□□□□ -0.21
CLOCK-211ENST00000513440 PBLDP30039 288 aaPredicted RBP13.72□□□□□ -0.21
CLOCK-211ENST00000513440 PIGAP37287 484 aa13.72□□□□□ -0.21
CLOCK-211ENST00000513440 CASP9P55211 416 aa13.72□□□□□ -0.21
CLOCK-211ENST00000513440 RPS14P62263 151 aaKnown RBP13.72□□□□□ -0.21
CLOCK-211ENST00000513440 PTSQ03393 145 aa13.72□□□□□ -0.21
CLOCK-211ENST00000513440 KIAA0040Q15053 153 aa13.72□□□□□ -0.21
CLOCK-211ENST00000513440 ZXDCQ2QGD7 858 aaPredicted RBP13.72□□□□□ -0.21
CLOCK-211ENST00000513440 FGD3Q5JSP0 725 aa13.72□□□□□ -0.21
CLOCK-211ENST00000513440 TPGS2Q68CL5 300 aa13.72□□□□□ -0.21
CLOCK-211ENST00000513440 HIST1H2AHQ96KK5 128 aa13.72□□□□□ -0.21
CLOCK-211ENST00000513440 HIST1H2AJQ99878 128 aa13.72□□□□□ -0.21
CLOCK-211ENST00000513440 H2AFJQ9BTM1 129 aa13.72□□□□□ -0.21
CLOCK-211ENST00000513440 HCFC1R1Q9NWW0 138 aa13.72□□□□□ -0.21
CLOCK-211ENST00000513440 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.72□□□□□ -0.21
CLOCK-211ENST00000513440 H0Y858 1186 aa13.72□□□□□ -0.21
CLOCK-211ENST00000513440 KRT6AP02538 564 aa13.72□□□□□ -0.21
CLOCK-211ENST00000513440 KRT6BP04259 564 aa13.72□□□□□ -0.21
CLOCK-211ENST00000513440 TFPTP0C1Z6 253 aa13.72□□□□□ -0.21
CLOCK-211ENST00000513440 HLA-FP30511 346 aa13.72□□□□□ -0.21
CLOCK-211ENST00000513440 KRT6CP48668 564 aa13.72□□□□□ -0.21
CLOCK-211ENST00000513440 NAA20P61599 178 aa13.72□□□□□ -0.21
CLOCK-211ENST00000513440 ABRQ12979 859 aa13.72□□□□□ -0.21
CLOCK-211ENST00000513440 OR4F3Q6IEY1 312 aa13.72□□□□□ -0.21
CLOCK-211ENST00000513440 XKR5Q6UX68 686 aa13.72□□□□□ -0.21
CLOCK-211ENST00000513440 ZNF548Q8NEK5 533 aaPredicted RBP13.72□□□□□ -0.21
CLOCK-211ENST00000513440 THAP11Q96EK4 314 aa13.72□□□□□ -0.21
CLOCK-211ENST00000513440 MTERF1Q99551 399 aaKnown RBP13.72□□□□□ -0.21
CLOCK-211ENST00000513440 MYOCQ99972 504 aa13.72□□□□□ -0.21
CLOCK-211ENST00000513440 HTATIP2Q9BUP3 242 aa13.72□□□□□ -0.21
CLOCK-211ENST00000513440 KIAA1522Q9P206 1035 aaPredicted RBP13.72□□□□□ -0.21
CLOCK-211ENST00000513440 B4GALT6Q9UBX8 382 aa13.72□□□□□ -0.21
CLOCK-211ENST00000513440 WARS2Q9UGM6 360 aaKnown RBP13.72□□□□□ -0.21
CLOCK-211ENST00000513440 PIKFYVEQ9Y2I7 2098 aa13.72□□□□□ -0.21
CLOCK-211ENST00000513440 CPSF4O95639 269 aaKnown RBP13.72□□□□□ -0.21
CLOCK-211ENST00000513440 CD247P20963 164 aa13.72□□□□□ -0.21
CLOCK-211ENST00000513440 AGXTP21549 392 aa13.72□□□□□ -0.21
CLOCK-211ENST00000513440 NSG1P42857 185 aa13.72□□□□□ -0.21
CLOCK-211ENST00000513440 ALDH3A2P51648 485 aa13.72□□□□□ -0.21
CLOCK-211ENST00000513440 HTRA3P83110 453 aa13.72□□□□□ -0.21
CLOCK-211ENST00000513440 CDKN3Q16667 212 aa13.72□□□□□ -0.21
CLOCK-211ENST00000513440 DEFB115Q30KQ5 88 aa13.72□□□□□ -0.21
CLOCK-211ENST00000513440 ZNF783Q6ZMS7 281 aa13.72□□□□□ -0.21
CLOCK-211ENST00000513440 TMEM179BQ7Z7N9 219 aa13.72□□□□□ -0.21
CLOCK-211ENST00000513440 PXYLP1Q8TE99 480 aa13.72□□□□□ -0.21
CLOCK-211ENST00000513440 MED8Q96G25 268 aa13.72□□□□□ -0.21
CLOCK-211ENST00000513440 TRMT2BQ96GJ1 504 aaKnown RBP13.72□□□□□ -0.21
CLOCK-211ENST00000513440 RNF208Q9H0X6 261 aa13.72□□□□□ -0.21
CLOCK-211ENST00000513440 KCTD5Q9NXV2 234 aa13.72□□□□□ -0.21
CLOCK-211ENST00000513440 C5orf42Q9H799 3197 aa13.71□□□□□ -0.21
CLOCK-211ENST00000513440 ARNTLO00327 626 aa13.71□□□□□ -0.21
CLOCK-211ENST00000513440 LRG1P02750 347 aa13.71□□□□□ -0.21
CLOCK-211ENST00000513440 CD9P21926 228 aa13.71□□□□□ -0.21
CLOCK-211ENST00000513440 RPS3P23396 243 aaKnown RBP eCLIP13.71□□□□□ -0.21
CLOCK-211ENST00000513440 SLC14A1Q13336 389 aa13.71□□□□□ -0.21
CLOCK-211ENST00000513440 DCTN2Q13561 401 aaKnown RBP13.71□□□□□ -0.21
CLOCK-211ENST00000513440 DOK6Q6PKX4 331 aa13.71□□□□□ -0.21
CLOCK-211ENST00000513440 Q6ZNB5 142 aa13.71□□□□□ -0.21
CLOCK-211ENST00000513440 GPR180Q86V85 440 aa13.71□□□□□ -0.21
CLOCK-211ENST00000513440 TMEM25Q86YD3 366 aa13.71□□□□□ -0.21
CLOCK-211ENST00000513440 PAPD5Q8NDF8 572 aaKnown RBP13.71□□□□□ -0.21
CLOCK-211ENST00000513440 UGT2B28Q9BY64 529 aa13.71□□□□□ -0.21
CLOCK-211ENST00000513440 ST14Q9Y5Y6 855 aa13.71□□□□□ -0.21
CLOCK-211ENST00000513440 CDH23Q9H251 3354 aa13.71□□□□□ -0.21
CLOCK-211ENST00000513440 MYOFQ9NZM1 2061 aa13.71□□□□□ -0.21
CLOCK-211ENST00000513440 MITFO75030 526 aaPredicted RBP13.71□□□□□ -0.21
CLOCK-211ENST00000513440 ZBTB11O95625 1053 aaPredicted RBP13.71□□□□□ -0.21
CLOCK-211ENST00000513440 EBLN1P0CF75 366 aa13.71□□□□□ -0.21
CLOCK-211ENST00000513440 ACRP10323 421 aa13.71□□□□□ -0.21
CLOCK-211ENST00000513440 EPORP19235 508 aa13.71□□□□□ -0.21
CLOCK-211ENST00000513440 SNRPD1P62314 119 aaKnown RBP13.71□□□□□ -0.21
CLOCK-211ENST00000513440 ADARB1P78563 741 aaKnown RBP13.71□□□□□ -0.21
CLOCK-211ENST00000513440 BNIP3Q12983 259 aa13.71□□□□□ -0.21
CLOCK-211ENST00000513440 PON2Q15165 354 aa13.71□□□□□ -0.21
CLOCK-211ENST00000513440 CCNYL2Q5T2Q4 361 aa13.71□□□□□ -0.21
CLOCK-211ENST00000513440 IRAK1BP1Q5VVH5 260 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms